BGIOSGA019308

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Revision as of 02:49, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019308| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019308, complete gene.| tag = OsI_187...")
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Gene Name

BGIOSGA019308

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019308, complete gene.

LocusTag

OsI_18753

Ensembl Transcript ID

BGIOSGA019308-TA

Ensembl Protein ID

BGIOSGA019308-PA

Length

6431

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:5799918..5806348

Sequence Coding Region

5799918..5799932,5800043..5800174,5800240..5800395,5800702..5800785,5800889..5801014
,5801983..5802198,5802605..5802736,5802864..5802959,5803062..5803223
,5803338..5803482,5803716..5803838,5803933..5804005,5804182..5804242
,5804599..5804709,5804800..5805273,5805353..5805387,5805937..5806348

Genome Context

<gbrowseImage1> name=IndicaChromosome05:5799918..5806348 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:5799918..5806348 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTTGCATATTGGTTCAGATGATAGACATGGTTTCAGTTATTGAGGAGCTCAGTGGGCTAACTTCTAGAGAACTTGGAGAGATGCTGAAGGAGTCAGAGAACTTTGTCTTGCAGGAGAAGACAGAAGATGGTGGTACAAAGCAGGTGGACATGGAAAAGCTTGTGTCCTCGCTTCCTCTTCACCTTCTTGCTGTATGTTTGGAACTTGAAAGAGGTTCAGATTTAGCGTATGTCCTCCGTGGTATGCGCTTCTTGCATAGTTTGTCTGAGCTAGCAGCTCGCCACACTAGGCTGGAGCAGGTTCTTCTCGATGATGTGAAATTATCTGAACAAGTCATGGACCTGATATTTTTTGTGCTATCTATTCTTTCCCACTGGAAGAAGGAAAATCATCTTGGTGTTTCTCCTTTTATACACTCATCACTTGTAGCAGCCAGTCTTCATCTGTTGACAAGTTACTTTTCATCTCAGTGGCATGAACTTGTTCATATTCTGCTTGCACATCCAAAGGTTGATATCTTTATGGATGTTGCCTTTGATAGCCTGCATGATGATGTGAGGTCACTGAGTCACAGGTTGTCAACATTGAGCACCAATACCTTTCCTGTTGGCCCTTTTGACTCACGACTCACACACTTCATCTGCCAACAGTGTGAAGCATCATTGCAGTTTCTTTTGTTACTGTGCCAGCAGAAGTTGTTCCGAGATCGTATTTTAAAAAACAAGGAACTCTCTAGGAATGGAGGTATTCTGTCACTCTCTCGATCTATATTGAAGTTAGGTGTTCCAGAGTGTCTGAAGGGATCAATTGATATTGCTGCTTCCATGTCCAGATTGAAGGCTAAGATTCTTTCTATTTTGCTCCAACTTTGTGAAGCTGAAACTGTTTCTTACCTTGATGAAGTCGCCACTTCACCAAAGAGTATGCAACTAGGGCAAACCTTGGCACTAGAGGTTCTTGATTTGCTGAAGACTGCGTTTGGAAGAAAACAAAAACTTACCTTGGATTCTCACGATAAGAGTTACCCTATGGGTTCTGTGCTTATCAGTGCGTTGCGTCTAGTTGATGTCTTTTCTGATGATTCAAACTTCAGATCTTCATTTATAACTAATACTATTCCATTTCTGACCCAAATTTTGGCTATTCCTCATGATGAGTTTGTCTCAAACTGGTGCTCTGTTAATCTGCCAGTGATAGAAGAAGACGCTAATCTTGATTATGATCCATTTGGTGCAGCTGAGCTGGCACTGGCAGCTGCTGAGCAAGAAAGAGACCTTTTTCTTCAGAAATTTCAGAAGTACTTGGTATCAGGGAATCCTAGATCATCAGTTGATCATCCAGCATCAGCTGATCTCAAGGCCACTACAGTTTGCAGAAACTTGGGATCTTTGTCTGAGTATGCTAGATCGTTAATTCCTAATAACTTGTTAAACGAGGAAGATGTGCAATTGTTAAGTGAATTTGCTTATAAGTTACAAACTTGGTGTAAATCACATGTTGGACAGAGTACATCCCAGGCAGTAAAGATTGATCCATCATCAGAAAGCAAGGAAGACTTTAAGCCACTGCAGCATCCCTTGATACCAAGTACTGTTGTTCCAGATTCCAGTATAAATAACCTTCCGAAGAACATGGAAGAGCCTACACCAACAAACATGGAAGAGCCTGCACCAACACCCTCAACGAAGCAAGAGGGAAATGCCAGGGATGAGACTCCTAGAAGCACTGTCGCTTTAAATGGTGGGTTCCTGCAGAATTCAGTTGGCCAGGACTTAGTCCATCTTGGTGTGGCGAGAACTAGTTCAGGCTTTCTAGGGGGAGGTACCAGTACAAGTACAGGATCCCTGCGCTGCAAAATGGATCTTGATCCTGCATCCAGCAGTATGGACCATTTCAAAACACCAGATAGAAAAGAAAGTGGTCTTCAGGATGATGAGAAAGGAGACACTCACATGTATGATGAGAGACAACCTAAGAGAAGGAAGCGAACCATTATGAATGATAGGCAAATAAACGAAATCGAGAAGGCTCTTATTGATGAGCCTGAGATGCATAAGAATGCTGCTTTACTGCAGGCATGGTCAGAGAAGTTAAGTGGGCAGGGCTCGGAGATTACGTCATCTCAGCTAAAGAATTGGCTGAACAACAGAAAAGCTAAGCTTGCTCGTATTGCGAAAGAAAGAGGAGTACTATCTGAGGGTGAGAACGCAGATAAGCCATCTACGCCAGCTACTCCCCACCACTGTGACTCCTCAGAAAGTGCTGGCGAGGAGAGCTACTTGCCACCTGCGAGGGTCATGAGTGCTCTAGGCATATCCAAGGGCAGCAGATTTGTGAGCCCAGATGGCAATGAGACAACATCACAGGCAGAATTCAATCAAAATATCATGCTTAGCCGCCCTTTCACAAGATCATTCTCATTTGAACCTGGCCGTCTTGTTTCGCTCATTGATAATGATGGGAAGGAGGTTGGCAGGGGAAAGATCTTCCAAGTTGAGGGGAGACTGCAAGGGAAGGCCCCTGACAGATACTCGCGTTTGCATCGTTGA</cdnaseq>

Protein Sequence

<aaseq>MACILVQMIDMVSVIEELSGLTSRELGEMLKESENFVLQEKTEDGGTKQVDMEKLVSSLPLHLLAVCLELERGSDLAYVLRGMRFLHSLSELAARHTRLEQVLLDDVKLSEQVMDLIFFVLSILSHWKKENHLGVSPFIHSSLVAASLHLLTSYFSSQWHELVHILLAHPKVDIFMDVAFDSLHDDVRSLSHRLSTLSTNTFPVGPFDSRLTHFICQQCEASLQFLLLLCQQKLFRDRILKNKELSRNGGILSLSRSILKLGVPECLKGSIDIAASMSRLKAKILSILLQLCEAETVSYLDEVATSPKSMQLGQTLALEVLDLLKTAFGRKQKLTLDSHDKSYPMGSVLISALRLVDVFSDDSNFRSSFITNTIPFLTQILAIPHDEFVSNWCSVNLPVIEEDANLDYDPFGAAELALAAAEQERDLFLQKFQKYLVSGNPRSSVDHPASADLKATTVCRNLGSLSEYARSLIPNNLLNEEDVQLLSEFAYKLQTWCKSHVGQSTSQAVKIDPSSESKEDFKPLQHPLIPSTVVPDSSINNLPKNMEEPTPTNMEEPAPTPSTKQEGNARDETPRSTVALNGGFLQNSVGQDLVHLGVARTSSGFLGGGTSTSTGSLRCKMDLDPASSSMDHFKTPDRKESGLQDDEKGDTHMYDERQPKRRKRTIMNDRQINEIEKALIDEPEMHKNAALLQAWSEKLSGQGSEITSSQLKNWLNNRKAKLARIAKERGVLSEGENADKPSTPATPHHCDSSESAGEESYLPPARVMSALGISKGSRFVSPDGNETTSQAEFNQNIMLSRPFTRSFSFEPGRLVSLIDNDGKEVGRGKIFQVEGRLQGKAPDRYSRLHR</aaseq>

Gene Sequence

<dnaseqindica>1..15#126..257#323..478#785..868#972..1097#2066..2281#2688..2819#2947..3042#3145..3306#3421..3565#3799..3921#4016..4088#4265..4325#4682..4792#4883..5356#5436..5470#6020..6431#ATGGCTTGCATATTGGTTAAATGATTACTTCTATCATTTCCCTGAGCCCACAATGCTCTTTTTCACTCCTGTGCAAACTAGTGTGGATACTTCTCTAACTAAAAAATTCTCATTTTGTTTCTTAGGTTCAGATGATAGACATGGTTTCAGTTATTGAGGAGCTCAGTGGGCTAACTTCTAGAGAACTTGGAGAGATGCTGAAGGAGTCAGAGAACTTTGTCTTGCAGGAGAAGACAGAAGATGGTGGTACAAAGCAGGTGTGTATGTATAATATTTGTTGTCATTTGAGTTTCTTTTCCCTGACATACATTTCTCTTCGTAGGTGGACATGGAAAAGCTTGTGTCCTCGCTTCCTCTTCACCTTCTTGCTGTATGTTTGGAACTTGAAAGAGGTTCAGATTTAGCGTATGTCCTCCGTGGTATGCGCTTCTTGCATAGTTTGTCTGAGCTAGCAGCTCGCCACACTAGGCTGGAGCAGGTTTACTTCTTTCAATATTTCACTCAAGCCTCCCCATTTTATCCACAAATAATTCATTTTTTTTTTCTTTTGAATCACGATACGCTTTGAGCATTCTTTTTCTTTCATCTCTGTATTGTTTTATATCTCTGTATTGTTTTTGTTCCCTAGTGTTGTGAACTAAATGCAATGCAACTCTTTTTTTTTGTCCATCTTTAGTCATTGCTAAGTTTAATCAAGTCCAATTTGTTTATTGATTTCATTTTACTCTCTGTTAAAATTGAACTGGCTGATGAGTGTTGAGAAACACATGTTTATTTATTGCAGGTTCTTCTCGATGATGTGAAATTATCTGAACAAGTCATGGACCTGATATTTTTTGTGCTATCTATTCTTTCCCACTGGAAGAAGGTTCGGCAAGTGCCACCAAATTATATATTGAGTTCTATGTACTGTTTTTTTTAAGATTATCATTTCATACTAATTTATGGTGGCAGCTATTGTTTTAAATTAGGAAAATCATCTTGGTGTTTCTCCTTTTATACACTCATCACTTGTAGCAGCCAGTCTTCATCTGTTGACAAGTTACTTTTCATCTCAGTGGCATGAACTTGTTCATATTCTGCTTGCACATCCAAAGGTAACACATGTTAATTTAGAATATGTTTAACTTAGTTGTCTTTTCATGCCTAAACGAAAGCATGATAAGTAACCTCCAGAATTTTGTGATGACTTTAAAATTAACCTTGAAATATCATTGATTTTTAATGCTGTTTTACCTTGCTTTAATTGTACCTGAATCCTTTATTATTTTCTATTTTTATCCTCCTTACCGGCTTGTCTATAATAGTCTCTCTGTGGTGCAAGATGATTTTTGTACATGATAATGCCCTGTTATTTTTGGTTTTATCGTTATGAGTTATGACAAAATAGAGCCGGCAACATGATTTGGGATGTGAGCCCTTATTGTTTTAAGGTCAAATCAAAATTCATCTGAACATTTTACCCTGTCCTGACATGGCATTTTGTGGTTTAAATCATCTATCAGCGATAAATCTCCATGTAATTTTGTGTACAGCCTACTGTATCAGAAAGCCATGCTCTGTCAAATGCAACTTTTGCTGTGTTTACTTTAAAGTTTCTGTTCTAACATATAATTAGCACACCAATATATTTTTTCCTTTGAGCACTACCACTGTTCAAACTTGTATATTTCTTTGTTTGGGGCATTTGATTGCAGGGATACATCTTTTGCATCATTATATCATTTCATAAGATAGTGTATTACTTCAGCTATCCTATTGTTTTCCTTGAAGCAAAAATACAAAGTCCATACTAAAGTTTTAGTGACTTGTGCCCATTGCATATTTTTCTTGTACTGTAATAATATTTGACTGAATTATGTCACTCTTGTGTTTATAGATGACAATTAGAAAGATTACTTAAAAAGAAAAAAAAAAGAGCACTGGGTTACTATTGCAAATTCTTTGATCATGATTCACGAATGTTTGCCAGATTGCCAGCAATACATGGATTTGACAGTTAGGCAATTATTCTTCGTTGTTTTTATCTCTTTATCTATCTTAATGTTTGATGTTTCATGGTCAGGTTGATATCTTTATGGATGTTGCCTTTGATAGCCTGCATGATGATGTGAGGTCACTGAGTCACAGGTTGTCAACATTGAGCACCAATACCTTTCCTGTTGGCCCTTTTGACTCACGACTCACACACTTCATCTGCCAACAGTGTGAAGCATCATTGCAGTTTCTTTTGTTACTGTGCCAGCAGAAGTTGTTCCGAGATCGTATTTTAAAAAACAAGGTCTCAGATATGCTTACAAATCCTGTTTCCTTTTATCTTTGGTATCACTGTTGATTAAAAAATATTTAATTGGATATTCTCTTCCCTTCATGACATATCAACATATACATGTTATATCATACTGATTTGATGAGAAAAATGTGTGTACCTTGAGGACTGTTTATTTGTTCCCCGAATGCAGTGTTCCATTAGTTTACATGCTTTGCTCTTGTTCCACAAAACAGATCAGTCTAGACTAGCCTCGTTCAAGAGACATGTTTTATGTTTTTTTTTGAGCCCACGTGTCTGTGTATTCCTATAAATTATGAGTACTAGCGTCAAATCTGCAATTTGTTACTATATATTATTACATTTGATGTGTTGGAACTTGGAAGCTAGATCTGAAGTAACCTCTTTCTTAACGCAGGAACTCTCTAGGAATGGAGGTATTCTGTCACTCTCTCGATCTATATTGAAGTTAGGTGTTCCAGAGTGTCTGAAGGGATCAATTGATATTGCTGCTTCCATGTCCAGATTGAAGGCTAAGATTCTTTCTATTGTAAGTTGGTCATGAGCCATGACTCAAGATTGCACTTCGTATAAATAATTAAATAGAGTGCTACTATATTTACTGTTTGCACAGTACCGAGTTACTAACTAAATCCTTGGTGCAAAACAAATGCTAGTTGCTCCAACTTTGTGAAGCTGAAACTGTTTCTTACCTTGATGAAGTCGCCACTTCACCAAAGAGTATGCAACTAGGGCAAACCTTGGCACTAGAGGTTAGTTCTACCAGGGATGATCGCAAACTTTGAAATGTTACCGACTCTGCTACCCGTGGATTTTTTTTTCAGTTACTGACAAAATTCTTATGTCACATGCAGGTTCTTGATTTGCTGAAGACTGCGTTTGGAAGAAAACAAAAACTTACCTTGGATTCTCACGATAAGAGTTACCCTATGGGTTCTGTGCTTATCAGTGCGTTGCGTCTAGTTGATGTCTTTTCTGATGATTCAAACTTCAGATCTTCATTTATAACTAATACTGTAAGAGTAACTATTTCTACCTTGATCTATTTTTAGTTTTTACCATTGAGCAACTGAAAATTTCCAGCAAATATAATGTTTTATTCAAGTCCCTTTTGTTCATCTCCTTTGCAGATTCCATTTCTGACCCAAATTTTGGCTATTCCTCATGATGAGTTTGTCTCAAACTGGTGCTCTGTTAATCTGCCAGTGATAGAAGAAGACGCTAATCTTGATTATGATCCATTTGGTGCAGCTGAGCTGGCACTGGCAGCTGCTGGTAATAAGTTAACTGAAGCTAAAGCAAACTATTCCTGCCCTTTTCGCCCTATCAGTATGCCTTCTATAGCATATGCACAGACAAGAACATCATGTGTGGTGAAAATAATAGCAAATTTGCATGTTTTTGTCCCAAACATATGCGAAGGTCAGAGCTTTTTCTCTCCTGCTACAAATTGCTAAGTTGCTATGTTGATTTGTTGTTAAAAGCAAGTTCCACTGTCATGTTAGCAGAGCAAGAAAGAGACCTTTTTCTTCAGAAATTTCAGAAGTACTTGGTATCAGGGAATCCTAGATCATCAGTTGATCATCCAGCATCAGCTGATCTCAAGGCCACTACAGTTTGCAGAAACTTGGGTAAAGTGGCCTATACTTTTATCCAATTTTGTGGTTATGTTTATGACTATTCATTATACTTCATGTGTAAACCTCTTTTTTGTGGGTTTTGCAGGATCTTTGTCTGAGTATGCTAGATCGTTAATTCCTAATAACTTGTTAAACGAGGAAGATGTGCAATTGTTAAGGTAGTTAAGCGTTTTTGACTTGTCATGTTTCTTAGTGTACAAACTGTGTTACAAATTTTTTGTTTAATGCCTAATTTTGTGGGTCAACATTTGGTTTTAATTTGTTGCGCGCTGCATATAGTTTTGAAACACTTTTACTGATATTTCTGCAAAATGTGTTTTTTTCCTATTTGCAGTGAATTTGCTTATAAGTTACAAACTTGGTGTAAATCACATGTTGGACAGAGTACATCCCAGGTTTGTTTGCTTTTCACAGTAATTATAGAATCATAGTAGCCACCTACATATCCAAGCATTTTGCTTAGGGTGCTTGGTTCCCTGCTCCTCCTCGAGGGATGACTACAAATTTCATTTCCAACAAAATAATGGTTCAACTGTTCAAGTACATCACTTGCACTCTGTCTCTGTGCAAGCTTTTTTAATGAACAATATTCAATACTATAGCCAATTTTTTTGTATGGTAGGTGATAGGTGCAACTTGTGTATAAATTAGAAAAATAGCTTTGACCCTTGCATCAGATGGTCAATTCATACTTCTAGCAATCTACTTGAAATCGAAATGTTGGACGTGACCTCATTCTGGGATGTTTTAGGCAGTAAAGATTGATCCATCATCAGAAAGCAAGGAAGACTTTAAGCCACTGCAGCATCCCTTGATACCAAGTACTGTTGTTCCAGATTCCAGTATAAATAACCTTCCGAAGGTAGGTTTGTTCAGTTGTTCACTATGTTGAGTATAATATATTAGCCATTGACTTGGTAATTCATCTGATCCCAACAAAAATGATGTGCAGAACATGGAAGAGCCTACACCAACAAACATGGAAGAGCCTGCACCAACACCCTCAACGAAGCAAGAGGGAAATGCCAGGGATGAGACTCCTAGAAGCACTGTCGCTTTAAATGGTGGGTTCCTGCAGAATTCAGTTGGCCAGGACTTAGTCCATCTTGGTGTGGCGAGAACTAGTTCAGGCTTTCTAGGGGGAGGTACCAGTACAAGTACAGGATCCCTGCGCTGCAAAATGGATCTTGATCCTGCATCCAGCAGTATGGACCATTTCAAAACACCAGATAGAAAAGAAAGTGGTCTTCAGGATGATGAGAAAGGAGACACTCACATGTATGATGAGAGACAACCTAAGAGAAGGAAGCGAACCATTATGAATGATAGGCAAATAAACGAAATCGAGAAGGCTCTTATTGATGAGCCTGAGATGCATAAGAATGCTGCTTTACTGCAGGCATGGTCAGAGAAGTTAAGTGGGCAGGTATAGTCCTTCACCTGGCCATTCTTCTGTTAGATCAAAATATTTTATATACTTCTCATTCATGAAAATGTGTTTTCAGGGCTCGGAGATTACGTCATCTCAGCTAAAGAATTGGTAACACTGAAGCTATCTTTGTTATTCTTTTTCCTTAGCATTTAGCATTACTTGTATGGGAACATATCCTGTGCACACAAGCCTTCTCATCTACACAGCGTGCAGACCAACTAACAAATTTCACAAAAATATCTAGAAAAAATTGTACAAGTATTTCCAATAGTATTACACTTATGTATAAAGTCTTAACTTCAAATTCATTATATCTTAGCTGTAACCAAAAAAAAAAAATCTAACAGTTTTGAGAGTATAAATCTGTTAGAAATTTGTCTTTTTTGTTGCTACCTATATATAATGAATTTGAAGATGAGACTTTACACATAGATGCAATACTACTAGAAGTACATGTGCAATGTTTTGTAGAATTTTTGGTGACATGTTTTAGTTGGTGTGCACGGTGTGTATACGAGAGGACTTGTGTGCAGAGGATAAGTTTCCTGCTTGTATACCATAACTGACGTTTTGTTCATCAAGTTCATACTTCACTTCTGTACTGTTTTTACTTCTCAGTCCATAGCTTACTTATGACAAACCTTCTTTAAATTCTAGGCTGAACAACAGAAAAGCTAAGCTTGCTCGTATTGCGAAAGAAAGAGGAGTACTATCTGAGGGTGAGAACGCAGATAAGCCATCTACGCCAGCTACTCCCCACCACTGTGACTCCTCAGAAAGTGCTGGCGAGGAGAGCTACTTGCCACCTGCGAGGGTCATGAGTGCTCTAGGCATATCCAAGGGCAGCAGATTTGTGAGCCCAGATGGCAATGAGACAACATCACAGGCAGAATTCAATCAAAATATCATGCTTAGCCGCCCTTTCACAAGATCATTCTCATTTGAACCTGGCCGTCTTGTTTCGCTCATTGATAATGATGGGAAGGAGGTTGGCAGGGGAAAGATCTTCCAAGTTGAGGGGAGACTGCAAGGGAAGGCCCCTGACAGATACTCGCGTTTGCATCGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019308