BGIOSGA019516

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Revision as of 02:52, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019516| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019516, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA019516

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019516, complete gene.

LocusTag

OSJNBA0037H03.12

Ensembl Transcript ID

BGIOSGA019516-TA

Ensembl Protein ID

BGIOSGA019516-PA

Length

4726

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:12267042..12271767

Sequence Coding Region

12267042..12267055,12267586..12267664,12267945..12268079,12268183..12268380,12269050..12269130
,12269206..12269306,12269565..12269682,12269827..12269859,12270216..12270309
,12270394..12270482,12270842..12270939,12271102..12271190,12271298..12271767

Genome Context

<gbrowseImage1> name=IndicaChromosome05:12267042..12271767 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:12267042..12271767 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGGAGACATATGTTCCATGTATTCGGAATTGGAGCATGGTCACTTCGGTTCAGTATCAGAGTACAAGTGAAGAAAGGATCTTCTGTATGGGATGTTGTTGTTGGTCCAGAGAATAAAACTGTTGTTTCTGGAGATAACTTTCTGAGAGTAAAAGTTGTTGGTGATTATACTGGTTATACAAGTATCCCATCATTTGAGGAAAACTATCTTGTGACTCCACGGAAGGGTACTGGTAGTAGTCAGCCACAAGACCTTGGTAATGAACATTCCAAATGGATGATATTGGACAGAGTTCGTTTTACACTAGACGGGCTTGAATGTGACAAGATTGGTGTTGGTTATGAGGCTTATCGAAACCAACCTAATTTCTGTTCAGCACCATATGGGAGCTGCCTGGGAAACCAGCTTTGGAACTTCTGGGAGTATGACAAAAGACGGATCGACAACAGCCAACTGCCCCTATATATTGTGGAAGGAAGATTTCAGAGGATTAATCAACATCCAAATGCAGGTGCTCATACATTTTCTGTGGGTGTCACAGAAGATCTTAATACCAATTTACTGATAGAGTTGATGGCTGATGATATAGAATACGTCTATCAGAGGAGTCCAGCAAAGATAATTGACATTCGCGTTCCAACATTTGAAGCCTTAAGCCAAGTTGGTATAGCAAATGTCACTACTAAAAATATTGGTAAACTGGAGTCTTCATATAGCTTGACGTTTAAATGCTCAAGTGGTATCAGTCCTGTGGAGGAGCAGCTCTATACCATGAAACCTGATGAAGTGATTGCCCGATCATTTGAGTTGCGTTCAACAACAGATCAAGCAGCAATGCATCAATGTGAAGCTATTCTGAAGGCATCAGACTTTAGTGAACTTGACAGAGAAGGATACCGTTTCTCTACCGCAGCTACGGTTTATAACAATGGAGCACAGATCGGTCCAACGAATGACCACAAGAAAGGCGGCTTCTGGGATTCCATCAAAGCTTTGTGGCGTAACCTGATCGATTTCCTTACTGGCAGATTGTGCTGGACCAAATGCCCGAGATTGTTCGACTTCGGCTGCCATATTCAGTACGTATGCATCGGCTGGATCCTACTGCTTCTCCTGATACCCGCAGCTGTGGTTTTCCTGTGGCTTCTGCATCAGGAAGGCTTGTTCGACCCGCTGTACGACTGGTGGGGGCTGGAGCCGGACGACGACTACCGCGCGCGCCGACGGCACCAGAAAGGGCGGCACCACCGGCACCATCACGACCACCGGCACCGTCACGGCCACAGCCACGGCGACCACCACCACCACTACCACGGCGGGCACCACCAGAGGCGCAGGCACCACCACCCACCAGCGTGGGATGTGGAAGGCCACCACCACGACAGGCAGCAGCACAGCCACGAAGCGGGGCGCAACCACCACCGTGGCTACGGCGAGGTGGTGGCCGCGGGCGCGGCGCCGCTGCGTTTGGACAGGGCGAGCCGGCCGGGCCAGACGGAGGTCGACGCCGTGGTGGAGTACAGGGAGCGGAGGAGCCGCCACGAGAGGCACGGCGGGCACGGGCACCGCGACGGCCACTACTCCCCGTCTGTGTAA</cdnaseq>

Protein Sequence

<aaseq>MWRHMFHVFGIGAWSLRFSIRVQVKKGSSVWDVVVGPENKTVVSGDNFLRVKVVGDYTGYTSIPSFEENYLVTPRKGTGSSQPQDLGNEHSKWMILDRVRFTLDGLECDKIGVGYEAYRNQPNFCSAPYGSCLGNQLWNFWEYDKRRIDNSQLPLYIVEGRFQRINQHPNAGAHTFSVGVTEDLNTNLLIELMADDIEYVYQRSPAKIIDIRVPTFEALSQVGIANVTTKNIGKLESSYSLTFKCSSGISPVEEQLYTMKPDEVIARSFELRSTTDQAAMHQCEAILKASDFSELDREGYRFSTAATVYNNGAQIGPTNDHKKGGFWDSIKALWRNLIDFLTGRLCWTKCPRLFDFGCHIQYVCIGWILLLLLIPAAVVFLWLLHQEGLFDPLYDWWGLEPDDDYRARRRHQKGRHHRHHHDHRHRHGHSHGDHHHHYHGGHHQRRRHHHPPAWDVEGHHHDRQQHSHEAGRNHHRGYGEVVAAGAAPLRLDRASRPGQTEVDAVVEYRERRSRHERHGGHGHRDGHYSPSV</aaseq>

Gene Sequence

<dnaseqindica>1..14#545..623#904..1038#1142..1339#2009..2089#2165..2265#2524..2641#2786..2818#3175..3268#3353..3441#3801..3898#4061..4149#4257..4726#ATGTGGAGACATATGTAAGTCCATAAATTATGTTATTCTTCTGGATGTTTTTCTGCACACTACCTAACACACCATCACACTCATCTACTTTATAGGGTCTAAACTGACCAAAGGAAAAGCTAATACGGCTCACTGTGTGCGATTTCCAGGCGACTGGTATGGAATTACTTGTGATGTACTTTTTTTGTATATTGCTTTTGTAATCAATAATCATTAACTTAGTGATTCCTTGACTCGGTGTACTGACTTAACTGAAAATAAAGGTTAATGTCTTGGCTATACTTCTTGATCGGAATGTTAATTGTCTAAACTTGACTAGTGGCATGATTTATAATGTGTTTTGTTGATCAGGCATGATTTTATTTGTTTTTGGCCAGCTGGGCATCCATCACAGAAGTATTTTTTTTCATATTCCAAAACCTAGTTTACTTCTTCTGAAGTAGGGGACACTTTCCAAGGCACTCTTCTATAATTCCAGGGTATCCTTTATTATTTGTTTATGATCAAATTGAGTAAATGCATCCCTTTGTTTTCTTATGAGCAGGTTCCATGTATTCGGAATTGGAGCATGGTCACTTCGGTTCAGTATCAGAGTACAAGTGAAGAAAGGATCTTCTGTATGGGTATGATTTGAAATACTTCATTAAGAGTTCCATCAAGCTATTATCACTGAGGACTCCTGAATAAATTATCAGATGAACCGTCTTGGCAATTCTTCAAAGCCTTAAGCATAAATAGCCATGATATGAACGGATGAAGTTTAGCAGCCTTGTTGAATTTTGTGTTGTTAAATTCGAGATTATCTTGCTTTTTTTAGGAACTAAAATTTTGAATGTTTATGTTTTTGGGTATGCCAAGCCTCAGAAGTGTTTTTACAATTTTTCTTTTCCAATTTTACTGCAGGATGTTGTTGTTGGTCCAGAGAATAAAACTGTTGTTTCTGGAGATAACTTTCTGAGAGTAAAAGTTGTTGGTGATTATACTGGTTATACAAGTATCCCATCATTTGAGGAAAACTATCTTGTGACTCCACGGAAGGTGCATCATCAAATTATGATAGTCATCCTGACACTATCAATATATTTGTAATTTCTGTTATGTGACTTTAAAACATTATTGAAATGTGCTATATGTGCTGAAGGGTACTGGTAGTAGTCAGCCACAAGACCTTGGTAATGAACATTCCAAATGGATGATATTGGACAGAGTTCGTTTTACACTAGACGGGCTTGAATGTGACAAGATTGGTGTTGGTTATGAGGCTTATCGAAACCAACCTAATTTCTGTTCAGCACCATATGGGAGCTGCCTGGGAAACCAGCTTTGGAACTTCTGGGAGGTAATTATAGAATTAATTAGTTGATTCCCTGTGCTTTGTTACGGGATGTGTGGATGAATGCATGTTATACATTATAGAAATGATAGATGTATATGTTTAAATAATGTGAAAATGATGTGGAGATAATGATTTGACATTATCTGCATATTGAGTTCTAAAAATACAACAAAATTATAAATGATACATCATGTTTGCATGATATTTAAAATACTCTAGTTAATAATTGGTAGTGGGTGCTGATGTGGCATACTCGCATGTGATTTAAAATACTCTAAATAATAATTGCTAGTGGGTGATGATGTGACACACTTGCATCTTGAGATTTAGAAGTTAGTGGGAGTCAACTATATAGATAGTATAGATGTGCCTAGCCCTATTATTTTATTCTTTTCCTTTTCACCAAGATAGGAAATCATGTTGCCAACAAAAGAGCACAACAGAGAAATATTGCCTTTCTTGGCTACCACTGGTTATGGAAAATTAAGTGTCACGAATGGGCCATCTTCTTTTTTTTTCTTTTCATCCTAAGTCATATTGTAAATTTTATCTCTTGCTGTTACTAATTTAATACTGAAGCACTTCTTTTAGTTTTCATTCTGGTGAGATCACCACAAGATAAAAAGTGTTTGGTGCCTATTGAGTCTTGAAAGATGTCACGGTTTGTTTCAGTATGACAAAAGACGGATCGACAACAGCCAACTGCCCCTATATATTGTGGAAGGAAGATTTCAGAGGATTAATCAACATCCAGTACATTTCCATCGCCTCTCTTACATTGCTCTCGTTGCTAATGTTGGATAAAGCTTCTAATGCATGCCCCTATAGAATGCAGGTGCTCATACATTTTCTGTGGGTGTCACAGAAGATCTTAATACCAATTTACTGATAGAGTTGATGGCTGATGATATAGAATACGTCTATCAGAGGTAATAATGATGTTTAATCATTTTGATTTAACAATAACCACTTAGATTTATATTGGTAGATTAAATCACACTTTTCAAAGCAGATGCTATCAATAAAATTTCTCTAAACCATACTTTTCTCTAAATTTCTGCCATGTTTGACAAACAGTATGGAAACAATCATCTCTGCTCTAGTTTTCATCTCTGAAGTCTTGCTCTTGTACATTTCTCTGTCTTTTAAATTAGTAGAGTGTCTAATGTGTTGCACTTCCTTATCAGGAGTCCAGCAAAGATAATTGACATTCGCGTTCCAACATTTGAAGCCTTAAGCCAAGTTGGTATAGCAAATGTCACTACTAAAAATATTGGTAAACTGGAGTCTTCATATAGCTTGACGGTATGTATCTCTTATAGAATTTTCCTTGCCGTGTGTATTTTTTTTCTTTAATGTAGTCCGAGTTCAAAGTAGTACGAACTGACCTGCAAATTAAGGCTGACTTTGATTTTCTTGAAACTTAACCAGTGTTTGCTACTTTTGTAGTTTAAATGCTCAAGTGGTATCAGTCCTGTGGAGGTAATATTACTAGTATCATCTAGTACATGTTTAGTGCTTCGGTATGCATTGTTTGTTTCTACTTGTCCTCTTTTTATGCATTCCAAATTTTACTTGAAGACCTGCTTCGGTAGATTTAAACCTTTTTCAACATTTTATTGGTCAAGTAAACGTATAGTTTCATTCCATGTAATCAGTAAAGCTGCCTGGCTATTTTGGACAGTCTATTTTCCTTTTAAGTGGAATATTTGGGACATTTGTTCCAACTCTATCATGTTTTATGCCTCATTTTACTGTTTATTATCCATCATCAAACTTTCCTGCTTTATGTTCTCACTGGATTCAGTCTCTTGAAGTTTTCCTGGCGTGGTTTTCAGGAGCAGCTCTATACCATGAAACCTGATGAAGTGATTGCCCGATCATTTGAGTTGCGTTCAACAACAGATCAAGCAGCAATGCATCAATGTGAAGGTAATAGAGCTTAGCATCAGTTGTGCTGTCAATGATCCCGTGTTAGGACTCACATGGCAGGCATGCCTCTAAGTTCCATTTCAGCTATTCTGAAGGCATCAGACTTTAGTGAACTTGACAGAGAAGGATACCGTTTCTCTACCGCAGCTACGGTTTATAACAATGGAGCACAGGTTCTGAATATTTGCGCTTTCTTAATGATTCTGATTGAACTGATTAGTGCAGAAAAAACTATATCAAATTTGGATTCAATACCAAATGTCAATCTCTATGCTCTTTGGGCTAAAAAGAGAACTATTAAAACTTTGTCGAATTTGGATACAATATCAAATGTCAGTCGTTATGCTCCTTTGGCTAAATAGAGAACTATTAGATGCTTTTATAACCAAGTCATACATTATCATCTCGTGTAAAATTATTATGAGTATAAATAATGAACTCAGCCACGATTATTATGTATTCTCTGAACAATTAAATCCATTCGTTTTTGCCGCGAAGTTCCGATGCTTAACTTGCCTTGAAAACTCTGTAGATCGGTCCAACGAATGACCACAAGAAAGGCGGCTTCTGGGATTCCATCAAAGCTTTGTGGCGTAACCTGATCGATTTCCTTACTGGCAGATTGTGCTGGTACTTCAATTCTTTCTAGTGTGATCATAACATGGTTTTATATTTGCTGAGTGTTCATCATTACTAGATAGTAATTGTTTGTGCTAGCTCTGATCATTGTTGATACAGCATAAGTATTTTTGTTCCGTTTTCTGCTTCTTACCATATATCATCTCGGTTCAGGACCAAATGCCCGAGATTGTTCGACTTCGGCTGCCATATTCAGTACGTATGCATCGGCTGGATCCTACTGCTTCTCCTGATACCCGCAGGTACGTTCGTTAGCCTTTCAGTACCGTTCGTTTCATCGCCAGATCGATCATCAAGCTGCCATTGCTCATCATTTTTTTTTTCTTACCTCAATCTGTCATTTTTGCAGCTGTGGTTTTCCTGTGGCTTCTGCATCAGGAAGGCTTGTTCGACCCGCTGTACGACTGGTGGGGGCTGGAGCCGGACGACGACTACCGCGCGCGCCGACGGCACCAGAAAGGGCGGCACCACCGGCACCATCACGACCACCGGCACCGTCACGGCCACAGCCACGGCGACCACCACCACCACTACCACGGCGGGCACCACCAGAGGCGCAGGCACCACCACCCACCAGCGTGGGATGTGGAAGGCCACCACCACGACAGGCAGCAGCACAGCCACGAAGCGGGGCGCAACCACCACCGTGGCTACGGCGAGGTGGTGGCCGCGGGCGCGGCGCCGCTGCGTTTGGACAGGGCGAGCCGGCCGGGCCAGACGGAGGTCGACGCCGTGGTGGAGTACAGGGAGCGGAGGAGCCGCCACGAGAGGCACGGCGGGCACGGGCACCGCGACGGCCACTACTCCCCGTCTGTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019516

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA019516&oldid=48272"