BGIOSGA019533

From RiceWiki
Revision as of 02:52, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019533| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019533, complete gene.| tag = OsI_192...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019533

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019533, complete gene.

LocusTag

OsI_19267

Ensembl Transcript ID

BGIOSGA019533-TA

Ensembl Protein ID

BGIOSGA019533-PA

Length

5105

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:12663075..12668179

Sequence Coding Region

12663075..12663137,12664007..12664450,12665492..12665654,12666758..12666851,12667229..12667428
,12668082..12668179

Genome Context

<gbrowseImage1> name=IndicaChromosome05:12663075..12668179 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:12663075..12668179 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGGACTCCGGCGCCATCCTCCGCCACATATCCTCCCTCAAGGACATGCTTGACAAGGATTCAAGAGAGTCAGCAACATCTTGCAACAGGATTTGGAGATGTGCAGTGCAGCGGTGCCCCAATACTACCACAGCTATCATGAAAGAGATGAGAGCATATCTGAAGAAGAATTCGAGAATTGGCAAATATCTCAACTTACACCCCTCCTCTTATCGGCCAATGCCAAGTTCTGAGACAGCTGCCAAAAGGAAACAAGCTCCTGACGCTCTTCAATTTGGACGACCAACCCCAAAACAAACAACATCTGTTGCTTCTATGCTTTGCAAGGCACCTGAAGAGGTTGACGAAGATATCCATGCCAAGGGGCCTTCTCAATCTACCATTGAGCAATGTACAAGGCAGTACAATGGAAAACAAATGGTCCATCAGCAAATAGCAAATTTGTTTTCTGAATTTGACATACCATTTGCTGCTGCGCACTCAAGGAGCTTTGAGACTATGGTCAACGAAGAGATTGAAGAGAATATTCAAAAGACAAGGGAAATAGAGTCAGAAATAGTGAAGCATTCTGAAACTGAAAAGGAGTATATCATGAAAGAGTCTGAACTAATGAAAGGGGTATCAATTGCTGAGTTTGAACTCAATGGCATTATACAAGTGGCTGCTGCTGAAACAGACTCACTTAAAGTGATGGAAGGCAATTTGGAATTCCAGAAAGCTACTCTGAATGGAATTAGGAAAAGATTTTCTAATAAAATGGAAAAGTTCATCAATGAATCTAAGGGGTTCCAGGCTAACATGCTTGGAGATTTGAACAAGGATTTAGTTCTTTTACTTAAGGAGAAAGGTTCGCTAGGGGATGAGAGTGAGAACTTGAAAATGAAGATCAACGCAATAGAAAGTTCGTCACGTGATTACTTTGCTGACATTCTTGAGGAGCTAAATATGGAAAATTCAGTTTTGGAATCTGAATTACAGTATAAGATTTCAGAATACATGGATGTTATGAAGGATATAAGCAATCTGAAGGCTCTATTTAGTTCGATCAATTCTTAG</cdnaseq>

Protein Sequence

<aaseq>MAEDSGAILRHISSLKDMLDKDSRESATSCNRIWRCAVQRCPNTTTAIMKEMRAYLKKNSRIGKYLNLHPSSYRPMPSSETAAKRKQAPDALQFGRPTPKQTTSVASMLCKAPEEVDEDIHAKGPSQSTIEQCTRQYNGKQMVHQQIANLFSEFDIPFAAAHSRSFETMVNEEIEENIQKTREIESEIVKHSETEKEYIMKESELMKGVSIAEFELNGIIQVAAAETDSLKVMEGNLEFQKATLNGIRKRFSNKMEKFINESKGFQANMLGDLNKDLVLLLKEKGSLGDESENLKMKINAIESSSRDYFADILEELNMENSVLESELQYKISEYMDVMKDISNLKALFSSINS</aaseq>

Gene Sequence

<dnaseqindica>1..63#933..1376#2418..2580#3684..3777#4155..4354#5008..5105#ATGGCGGAGGACTCCGGCGCCATCCTCCGCCACATATCCTCCCTCAAGGACATGCTTGACAAGGTCCGTCCCGCTCTCTGCTGCTTCCTCTCCGTTCTCTCTCCTGCGCACTGTACTGGTAGTCACTAGCAATGGCGATGCGATGAATGCCTCAATGCCGTGGAAGTCTCGCGTTCGCTCTAGGTGTCGAGTCGCCCGCCGCGGCGATTGGGCGTCGCCAATGGAGCGATCAGGTGGCCGAATCGCGCGTCCGCTTCGGCGATTAGGCGTCGCCATGGCGAATCAGTCGTCCGAATCGCCTGACTAGGCGTCCGCTTCGACGATTAAGCGTCGCCATGGCGATCGACTATATTTTGAGAGAGAGAGAGAGAGAGAGAGGGTTGGGGCACGAACACATCGTGGGGCTGAGGGGAGGCGAACCCTAGCCGCCGCCGCCACAGCCGCGACCGTGGATCGTCGGCGTCGAGCCATCCCCTCCCTGCGCACTTCCTTCCGGTGGCCACCGTCGAGAGCTCCTCCCTCCGCTCTTCCTTCTGGAGGCCGTCGTCCCCAGCTCCTCCCGTGCCGGTTTGCTCCTTTTCCGTCCAATCTCTCTCCTTCGCAGCTTCGCTGCTTTTTCTCTGTTTCTTGGTTTGCTCCTCTATCTATTCAACCCAGAATTTTCTTTTCTCTTTCTTCTCTACTTTCTTCTTCTGCTCTCTCCCCATTCCCCAAACTTCTTTTGTTTGCTGACTGTTATCTCATCTATTGCCCACATATCAGTCTCATCATGGTGGATCCATTCGCCAGCGAAGGGAGTCAGTATGACCCATCCAAGGATCCTGAACGGAAGTCTAAGTCAAAAGATCCGGGATGGAAATACTGCTTCTGGCCAGACTTGAGCAACAGAGATTTGATCCACTGCTCGCTTTGTGGCAAGCAAATGATTGCAGGATTCAAGAGAGTCAGCAACATCTTGCAACAGGATTTGGAGATGTGCAGTGCAGCGGTGCCCCAATACTACCACAGCTATCATGAAAGAGATGAGAGCATATCTGAAGAAGAATTCGAGAATTGGCAAATATCTCAACTTACACCCCTCCTCTTATCGGCCAATGCCAAGTTCTGAGACAGCTGCCAAAAGGAAACAAGCTCCTGACGCTCTTCAATTTGGACGACCAACCCCAAAACAAACAACATCTGTTGCTTCTATGCTTTGCAAGGCACCTGAAGAGGTTGACGAAGATATCCATGCCAAGGGGCCTTCTCAATCTACCATTGAGCAATGTACAAGGCAGTACAATGGAAAACAAATGGTCCATCAGCAAATAGCAAATTTGTTTTCTGAATTTGACATACCATTTGCTGCTGCGCACTCAAGGAGCTTTGAGACTATGGTTCAATCCATCATACAATTTGGACCTGGTTATAAGCCTCCTAGTCATCAGGATTGGTGGGTTCCGTTGCTTGTTGGGGCAAAGGAGACTACGTTGGGAGCCAGTGGTAATATGGGAGATTTGAATGAATCGGACGATGATATTTGGTAGTTAAGACCAGAATCATTTACCTATGATGTCATGCTAGTATACTATTATGCTGTTTATCTGTCTCGGAGAACGCTGATGCTTATGACCTATGTACTTTTGGTGGATGATTTTTGCTATATTTATTACCTTTGATAACTTCTACTAATGTGCAATGTTGGTATGTTTCTGTATTATTGTTTGCTAAATACCATTGCTTGTACTTGTCACCTAGGCATCTGCCTAAATAACTAGGTGTGCAAAGAGGTGCTTGACTCTCAGGTGCTATGCCATTAGGACTAAGGAAACATTGTCATTCCTGTTGCAATTTTTATTGCTCGAGCTATATACTGCAGTGGCTTTGTTTACCATTGGTTTCCTGCTTCCATAAATGGATTCTTTACTTGTACTGAGAAAGAGGTGGTGAAATAAATAGATCAAGGGTAGATATTAATTATTCTTGAGCTCCACTGTTACATTTTTTTTTCAGGATGCAGATGTCCATTAAAATTGGAGCTTTCATTTGGCTTTTTTCTGTTTGGAGATGACTTAATTATGTATGTGTAACTGACCAAGTATTATATTTTAAAACACATATCTGGTATTGTCTTTCAACTGAACAGGATGCAGAATTTCTGACTTGGACCTATGGCTTTATGATCATCTATAGTTTCACAGAAGCAACGAATTTTGGACTTAATGTATAGTACTAGCTTGTAACTTACTGCGATAAATCCAGTACTCTCTCTTCAAGCAAATGTCCTCCTCTGGCTGTAGAATGGGAACATGTGCAACATAATGCAAGGATGATTTTTGAGTGTGAAGAACTGAATTCATCATAGTAGCGCGTTGAACTTTTTCATTCCAGATCTTATGCGTAACTGTGCTATATTTTCTCTGTTATTCTTGAATTAGGTCAACGAAGAGATTGAAGAGAATATTCAAAAGACAAGGGAAATAGAGTCAGAAATAGTGAAGCATTCTGAAACTGAAAAGGAGTATATCATGAAAGAGTCTGAACTAATGAAAGGGGTATCAATTGCTGAGTTTGAACTCAATGGCATTATACAAGTGGCTGGTAATTATTGCCTTTATTCATGCAGTTATTAGCTCAGTGGCAAATATCTAAGCTGTGGTTAACTTGCATAGTATATCCTTGATAGCAGTATGTTTTAAGTACGATAGCAGTAATTTTTTGGACAAAGGTTATTAAAGTTGCTTCAGTAATTCCCTTTTGAGGCCAAAGATAATCTTGCTCTTCAAAACTTGAAGCTAAAATATTGTTTTTTCCCTTGATTATGCAACTGAAACTTAACCAATTTATCTCGACCTTAACTTCAACGCATGTGGCTAGGAATGTATCTGCATGTGGACTCTATTTTTCAGATTGTACTCTCTAGCAACACTGATCTTGTATCTTTAACCTTTCTTCTGTCATTTCTAGTGTAGATTTATGTCATGCTTTCCGTACAAGTTATGGTTGTTTGTTACTAGAAGCTTAGCCTTTTAAGTACATTGCAAGGTTTTTTTTATGTAAAATACTGCAAGGTATTATTCCAACCAAGTCCATTCTGTCATTTACTTAGTGTTTACGCATCATAGTTTTCTTTCCTAATCACTGTTCCCCACAGTGATCTGTATGTTAATGAATATTATTATATATCACACAAATGTTTCTCAAAATCCAATAAGACCCATCTACATTTTGCATTTGAGTTATAAAATTTGATTATCTGGAGACAGAGGTTTACTTTCCAGTTCTAAATACACTTTCACTGTAATCTTGTGAGAGCAACAGCTTTCTGTAGATGTGTAGCTTTGGACATGTGTTTGGTTCTTTATTTCATTTTTTTAGTGGAATTTGGCTATTTGTTTAAGATTATTCCATTAGTTGGATCTGCACAATTACACTGTGTGTACTGCAGGGACCCTCATGAAAATCACACCTGCCATTATCTCATTTTCTGCATGCGAATCCAACACATGATTCGCATTGTTGTTCTGTGCTAATTGTGAACTGGGTGGTTCTATCTTAACAAATAACAGTAAAAAAGGCACTTTCTTTACTGCTGTTGATAGTATTCTTGTGTTATTTTTTCATGTCTCATGCTGGATGGAATTTTCAATATTGTGGTATGAGTACTCTATGAAACACCTAATCATTTTTAGCTTTTCAAACAGCTGCTGAAACAGACTCACTTAAAGTGATGGAAGGCAATTTGGAATTCCAGAAAGCTACTCTGAATGGAATTAGGAAAAGATTTTCTAATAAAATGTATGGTCTACATTTGGTCCATTGATGAGATCAAATGGTTTTCAGCGTTCTGACTTATATTGAAACTTTACAGCTCTAGTTTTACATCAGATAATATGACGTTTTTCTTGCATTTTCTTGTTAAATGGGAAACCTTCTCTGTTCCTTCAAAGTGCTGCAATAGAGTTCATGTACTAAACCACTATTACGAACAGCTCCGTGTACTGTGACTGATTTAACCACTGTCATGATTCCAAATTATTCATGACTTGGAGCTCACTAAATTCATTAAAATGATTAGATAGTAGGATTGCAAATATTTATTCTCTGCTTCTTTTACTTCCAAAAAGAGCTGAACAGGAAATAATGCCTCAGATTGTTTACATTATATTTATCAGGGAAAAGTTCATCAATGAATCTAAGGGGTTCCAGGCTAACATGCTTGGAGATTTGAACAAGGATTTAGTTCTTTTACTTAAGGAGAAAGGTTCGCTAGGGGATGAGAGTGAGAACTTGAAAATGAAGATCAACGCAATAGAAAGTTCGTCACGTGATTACTTTGCTGACATTCTTGAGGAGCTAAATATGGAAAATTCAGGTAATTATTGTGGAGGTTGTTTGAGCTCAAAATTTTAATATTTACTTCAACCCTTAGTTAATGTTTTTTGATGTTTTGTTACAAAATCTTTGTTTGTATTAATTATATTTAATTGAATTGCATTATATGTTGCTTATTTTATTAACACTATTATTGTACTAAAGTTTAGGAAGCTCTATCTTTTGAGGCACACTGGTATTTCCAGGGCTTGTTCCACAGTGCACACCATCATCTGAATATTTAAACATTGTACATAAGAATTGATAACTTTATACTGAGTTAAATTATTTGTCTTGCCAACTTCTCTGAAGAAAGTACTCAACTCACTTTGTATGATGAGAGGAAAATAATATGTAATCTTTGTGACTGCATTGTTTCCCTTTTTCTCTCTTGTGTGCAGTGCGAGATTTGGTTTAGCTAATTTGTTGCCAGAAACCACTTTACATATCTTCTATTATTTTGCCATAACCTGCAACTATGTTATGTTCTGTCACTGATTGCATTTTAGACTTTCCCTTCTCCTTTAAGCGTGGAAATTTATGGTTGTTTGTGAACCGATATATGTATGTAAATTGTGATTACTGCTTTTCTGTCTTGCACCTACGTTATAACCGAAGTTTACCTTTTGTTAATGGGTTTAATTGATGTTGCAGTTTTGGAATCTGAATTACAGTATAAGATTTCAGAATACATGGATGTTATGAAGGATATAAGCAATCTGAAGGCTCTATTTAGTTCGATCAATTCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019533