BGIOSGA019602

From RiceWiki
Revision as of 02:54, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019602| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019602, complete gene.| tag = OsI_194...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019602

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019602, complete gene.

LocusTag

OsI_19429

Ensembl Transcript ID

BGIOSGA019602-TA

Ensembl Protein ID

BGIOSGA019602-PA

Length

3684

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:15467427..15471110

Sequence Coding Region

15467427..15467684,15468035..15468211,15468303..15468368,15468512..15468637,15469002..15469181
,15469518..15469682,15470721..15471110

Genome Context

<gbrowseImage1> name=IndicaChromosome05:15467427..15471110 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:15467427..15471110 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTACCGCCGGAAGCCGCAGCCTCCGCAGACGCCGCCGTCCTTGGACCACCACCACCACCACCACACCCCCTCCGTGGGCCCCTCGTCCCCGCCGCAGGACTCCCTCGCCGCGCAGGCCATGCGCGCCTCCGCCGCGCACCGCGACGCCTCCTCCCTCTCCTCGGCCTACTCCTCCTCCTCCGCCTCCGCGGCCGCCGCCGCCGCCGCGGCTCGCCGGGGCCACCACGAGCCCTCCGTCTCCACGCCTTCCCCCGGTTCTTCGGGTTATGAATACACATCCATGAAGAACTTGAATGAGGCTAAGTACGGATTTTGGGGGGCCCTTGCTCGGAAAGCCAAGTCTTTTCTGGACGAGGATGGTTCACCAGGGCAGTATGATTCCCCGGCGAGGCAGCAGCCGTCAAGAGATGCGCCGCCGGTTGGTGTCCAGAGATTAGCAGCACAGTCTAAACTTTTGACTTTTGCTAATGATGTTAACACTTATTCTGTCATCATGTATACACGCTCACAACAACCACCGTCTGAAACATGGAAATCCGAGACACCTCCATCTCATAAGAGGTCCGAGGCCATAGCTTCCTCCCTCAACTATATTGGTGGCACAATAAAAAGTGCACTTGAAGAAGGCCGGACGATTGTAGAAAATAAAACAGCCGACATTATTCATGAAACACGCAAATTGAACATAAGAAGAAAAGGAGCTGGCTCAACTACACAAGGAGAAGCTCCACAAAGATTTACTCAAAGGAATCTTCCACAAAATCCACTTGACTACGAAACTCAATTGAAGGCATCTCGCGACGTTGCAAATGCCATGGCAGCAAAAGCAAAGCTGCTATTACGTGAGCTGAAGACTGTGAAGGCCGATTTAGCTTTTGCAAAGGAACGTTGCGCTCAGCTTGAAGATGAAAATAAGATTTTGCGGGAAAGTCACGATAAGGGTGATAACCCTGAAGATGATGATCTGATCCGCCTCCAACTAGAGACACTATTAGCTGAGAAGGCACGGCTCGCACATGAGAATTCGGTGTACGCTCGAGAGAATAGATTCCTACGAGAAATTGTTGAGTACCACCAACTTACTATGCAGGATGTTATATATGTGGATGAAGGCATTGAAGAGGTCACTGAGGTCTACCCTACACAAGTATTACCACCTGCACCTTCTCGGGCTGGTTCAGGCCTTGGTCGCTCTGTAACCCCAGCTACTCCCAAGACTGCCAGCTCATCACCTTCATCAACATCCATTGTTGTACCAGAAACTTGTCCGGTCGTTCCAGCCTCCCCAAAGTCGCTTTCTCGGACTTCATCTAAGCAACAGATCAAGCCCGGCACCACCAACCATGCTGAAGATTAA</cdnaseq>

Protein Sequence

<aaseq>MAYRRKPQPPQTPPSLDHHHHHHTPSVGPSSPPQDSLAAQAMRASAAHRDASSLSSAYSSSSASAAAAAAAARRGHHEPSVSTPSPGSSGYEYTSMKNLNEAKYGFWGALARKAKSFLDEDGSPGQYDSPARQQPSRDAPPVGVQRLAAQSKLLTFANDVNTYSVIMYTRSQQPPSETWKSETPPSHKRSEAIASSLNYIGGTIKSALEEGRTIVENKTADIIHETRKLNIRRKGAGSTTQGEAPQRFTQRNLPQNPLDYETQLKASRDVANAMAAKAKLLLRELKTVKADLAFAKERCAQLEDENKILRESHDKGDNPEDDDLIRLQLETLLAEKARLAHENSVYARENRFLREIVEYHQLTMQDVIYVDEGIEEVTEVYPTQVLPPAPSRAGSGLGRSVTPATPKTASSSPSSTSIVVPETCPVVPASPKSLSRTSSKQQIKPGTTNHAED</aaseq>

Gene Sequence

<dnaseqindica>1..258#609..785#877..942#1086..1211#1576..1755#2092..2256#3295..3684#ATGGCGTACCGCCGGAAGCCGCAGCCTCCGCAGACGCCGCCGTCCTTGGACCACCACCACCACCACCACACCCCCTCCGTGGGCCCCTCGTCCCCGCCGCAGGACTCCCTCGCCGCGCAGGCCATGCGCGCCTCCGCCGCGCACCGCGACGCCTCCTCCCTCTCCTCGGCCTACTCCTCCTCCTCCGCCTCCGCGGCCGCCGCCGCCGCCGCGGCTCGCCGGGGCCACCACGAGCCCTCCGTCTCCACGCCTTCCCCCGTAAGCTTCCCCGCTGAGACTCCGCCCCACCCCTTAGATGTGTCTGATGCGTGGCCCGGATCTGGTCCGCTCGGGGCGGTTTGTCTCCCCGTCCTAGCCGCTTCTTGAAATCCATGGTGGTGAATCGATTAGGGATATCGATTTAGGGCCGCATCTCTTCGTTTTGATTCCAGTTAGGTTCGCGATTAACTAACTTGTGATGCTTGACTACTTCTGTTTAGTGGTTTTGCCGCCGCCTCTGCTGTTCTTGGGTTGGGTCTCCCTGACATCATCGGACCAAATTGTTGTATTTCTTGATTTGGGGAGCGAAGATTCTATGTTTATACTGTCGCTTTTGTTCTGTGTTGTAGGGTTCTTCGGGTTATGAATACACATCCATGAAGAACTTGAATGAGGCTAAGTACGGATTTTGGGGGGCCCTTGCTCGGAAAGCCAAGTCTTTTCTGGACGAGGATGGTTCACCAGGGCAGTATGATTCCCCGGCGAGGCAGCAGCCGTCAAGAGATGCGCCGCCGGTTGGTGTCCAGGTGGGAACTGCTGTCCTGACATTCTCTTGCAGTTAATTGAACTGGTAGATTCTAATTTTTATTTAATGCGTGTACTGATCATTTCTTGAAGAGATTAGCAGCACAGTCTAAACTTTTGACTTTTGCTAATGATGTTAACACTTATTCTGTCATCATGGTCAGTACTTGACTACTTGTTCATTCATGTACTATAATCTGCACCTTGTAAGTTTGTGTTGTGCTTAACTGCCATTATTGTGTTTAGGCAGTTTACTTTCAGATGTTCTTGTGTCAGTGCCAACATTTTTATTGCTGTTGCAGTATACACGCTCACAACAACCACCGTCTGAAACATGGAAATCCGAGACACCTCCATCTCATAAGAGGTCCGAGGCCATAGCTTCCTCCCTCAACTATATTGGTGGCACAATAAAAAGTGCACTTGAAGTAAGTTGCTATACATCAACTACTTACCTAATCCTATTTAAACGATCACGTGAAAGTATATCTCCTTTTTCCGTTAATGTTATTTAAGAACTGTTCAAATAATTTCTATTCTAAAAATATCCTGGTAGCATTAGCAAACCATGTGTTAGAAGTATAGCACCAGGGAAATACTTTTATCTTTCTTCTTTTACCTTTGTCTCAACTTGGAAAATATGAAGCATTTTACGTTGTTGTCTATTTCATATCACAACAGCACTAGAATAATGGTGATATGACTGGTTAATTTATTTTATGATTGAGGCATCCTTCTGTTATGCTTTTATGTTATTTACCCATGCTAACATGTTTTAAATCTTCTTTCCAGGAAGGCCGGACGATTGTAGAAAATAAAACAGCCGACATTATTCATGAAACACGCAAATTGAACATAAGAAGAAAAGGAGCTGGCTCAACTACACAAGGAGAAGCTCCACAAAGATTTACTCAAAGGAATCTTCCACAAAATCCACTTGACTACGAAACTCAATTGAAGGCATCTCGCGACGTAAGGTGGCCAATATGTGTCACTAGATATGTTGCTTAGTGCTACATTTTGCATCTTGGAATCCACGTGGTTTCCAAATTTAATCTGGTGGCATTTTTGATAAACATCATTTTTACCTGATAGCTGTTCAAGTTTTTTTTTTGTGTTGAGCGTGATATCTGTGTGATTATATTCTTTGCAAAGTATTTTTCATTAAACATAGCCTTTCAGTGCTTATTTCATCCTGTCCTTTATTTTTTCTCTGGTTGACGAACAGTGGCATCAGTTTAGTAATCTTTTGTCTCTCATCGCCCTTTCTGTTGGAGTGGATTAGTGACCCATATTTTGCACTTGCAGGTTGCAAATGCCATGGCAGCAAAAGCAAAGCTGCTATTACGTGAGCTGAAGACTGTGAAGGCCGATTTAGCTTTTGCAAAGGAACGTTGCGCTCAGCTTGAAGATGAAAATAAGATTTTGCGGGAAAGTCACGATAAGGGTGATAACCCTGAAGATGATGATCTGGTTAGTAATTTTTCTTTAAAACGGACAAGCAATTATGAAAATCATCAGATTCTTGATTGCTGGAGTTATGTATTAAAATGTTTTGGGCTTCTTCTGTGCATCTAAAGTTTTACTAAATAACTACTCTTTTGACTTGAACACCTGTAGTCCAACTTTCTGAACTAATAATAAATAGCTATTGAGTCTACAAATTATAGCTTCACATGCTCAATTCAAACTTATCTTGGAACTATTCCTGAGACACTGCTGATCCTGGCTTAACTGCCTAAAAAAATTATCATGGATTTTGACTCTTATATAATGTATGTTCATCAGTGTGAAATGTGGCCGACTCATGCTTATCTTACCAATAGTTTATTAAAAATTGCCCCTGAGGGGTCTAATTACATTTTGTATTATATTCCGAGTTTTTTTTTGTCATATTAGTTACTACCTCTGTCCCAAAATAAGTTCATTTTTCACCTACCCCACACATACCAATACAAAAGCAAAAGGACTAGAATACCCTCCACTTTACCAAATCTCAATGGAATTGTCCCCCACTTTATCTACTCCCAATGTATTTATCCCTACTTTCACAAACTCCGATGCAATGATCACTAAACATGAACTTGTTTTGGGACAAACAGGAGGGGGCAATGAACTTATTTTGGGATGGAGAGAGAATGTTGATATCTTTTTTGTGAATGGAACCTGTAATTTTCTGTGCCTTACAGCAAGTTTAATAGTATAGCCCACTACTAACTCAAAATCATCTATAGCCAATGTAATAGTCAATTCATACAATAGTTGCTTACTATACTATTAATACCTGGTCCCACCTGTCATACATACATTACGTCTTGGAGTCCGTGCTGCAGCTGGCTACAGATCTATAGCTCGCTGCTCTTCTCTCTTCTTTTATCTCTTTAAAATATGTTTATAGCTGGCTTATAGCCTGCTATTGTACCTGCTCTTACCAATATGACAGGAGTCCAGGGTGGTACCTGTTACCTTCCTCTGTGGTTAATCATACTCTTTTTTTTTTTAAATTTGCAGATCCGCCTCCAACTAGAGACACTATTAGCTGAGAAGGCACGGCTCGCACATGAGAATTCGGTGTACGCTCGAGAGAATAGATTCCTACGAGAAATTGTTGAGTACCACCAACTTACTATGCAGGATGTTATATATGTGGATGAAGGCATTGAAGAGGTCACTGAGGTCTACCCTACACAAGTATTACCACCTGCACCTTCTCGGGCTGGTTCAGGCCTTGGTCGCTCTGTAACCCCAGCTACTCCCAAGACTGCCAGCTCATCACCTTCATCAACATCCATTGTTGTACCAGAAACTTGTCCGGTCGTTCCAGCCTCCCCAAAGTCGCTTTCTCGGACTTCATCTAAGCAACAGATCAAGCCCGGCACCACCAACCATGCTGAAGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019602

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA019602&oldid=48358"