BGIOSGA019988

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Revision as of 03:01, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019988| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019988, complete gene.| tag = OsI_202...")
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Gene Name

BGIOSGA019988

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019988, complete gene.

LocusTag

OsI_20224

Ensembl Transcript ID

BGIOSGA019988-TA

Ensembl Protein ID

BGIOSGA019988-PA

Length

6101

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:23978808..23984908

Sequence Coding Region

23978808..23979252,23980303..23980370,23980496..23980584,23981232..23981429,23982085..23982289
,23982359..23982526,23982705..23982872,23982954..23983144,23984385..23984488
,23984895..23984908

Genome Context

<gbrowseImage1> name=IndicaChromosome05:23978808..23984908 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:23978808..23984908 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGGGCCAGACGTACAGCCGCCTCGGCAGCCTCGGCGGCGCGCCGTCCCCGCCGCCGGTGCCACCGGCTGTGGCGGCGGTGGCGTCCCTGCAGCGGGGCGGGGGCGGGAGTGGGAGGAGGACGCCGGGTAAGGGGGGCTCGGCGTCGGCGTCGGCGGCGGCGGGGTGGACGGGGGTCGGGTGCGGCTGCGCGGCGAGGAGGGCGGCGAGGGCGGTGCTCGCGGCGCTGCACCGGAGGCAGGCGGTGTTCCTGTTCGCGCCGCTGCTGTACGTCGCGGCCATGCTGCTGTACATGGGGTCCATCCCGCTCGACGTCGTGCCGCGGATCGTCGCGCGCCCGGCGCCCGGGTCGGTGTACCGCAGCCCGCAGCTGTACGCGCGCCTCCGCGCTGACATGGACGCCGACAACTCCACCGACGCGGTCAGTGGCTCCTCCTTTGCAGGTCTGCCTGAATCAAATGGATACATATATATTGAGGCAAATGGTGGTTTGAATCAACAAAGGACATCGATATGCAATGCGGTTGCTATCGCCGGTTTCTTGAACGCCACTCTTGTTATCCCAAACTTCCATTTCCATAGTATTTGGAGGGATCCCAGCACATTCAGCGATATTTATGATGAGGCTCACTTTGTAAAACGTCTTCAAAATGATGTACGAGTAGTTGAAAAGGTGCCTGATTTTATAATGGAGCGATTTGGCCACAATCTTAGCAATGTATTCAATTTCAAGATAAAGGCTTGGTCCCCTATTCAATACTACAAAGATGCTGTTCTTCCTAAGTTGATTGAGGAAAGGCTCATCAGGATTTCACCCTTTGCGAACCGGCTGTCATTTGATGCCCCTCCAGTTGTTCAACGGTTGAGATGCTTGGCTAATTTTGAAGCTTTAAAATTTTCCAACCCAATTGCGACTCTATCTGAGACCTTAGTCTCTCGAATGAAAGAAAAAAGCACGGCGAGCAATGGGAAATACATCGCGGTGCATCTTCGTTTTGAGGAGGATATGGTTGCCTTCTCATGTTGTGTCTATGATGGTGGTGATGAGGAGAAGAAGGAAATGAATGCAGCCAGAGAAATAGGTTGGAGAGGGAAGTTCACTAAGCGAGGACGTGTAATAAGGCCAGGAGTGATAAGAATGAACGGAAAATGTCCACTCACACCTTTGGAGGTTGGGTTAATGCTTCGTGGAATGGGTTTCAGCAATAATACTGCAATTTTTTTGGCTTCTGGAAAAATTTACAGAGCTGAGAAGAACATGGTTCCTCTTCTTGAAATGTTCCCTCTCCTACAGACAAAAGAAACTTTAGCATCTGCTGAGGAACTTGCTCCATTTAAGGATTTCTCCTCGAGGATGGCTGCTATTGACTACAGTGTTTGTGTCCATAGCGATGCTTTTGTGACTACACAAGGTGGGAATTTCCCTCATTTCCTTATGGGTCACAGGAGATACTTGTATGCTGGGCATTCAAGGACAATTAAACCAGACAAAAGAAAACTAGCCATACTATTTGACAATCCACGTATTGGCATCCTATTTTTGGGGAGGCGCATAGTTCATGGAGGTACTCCCAACAAGGCTCGCTGTGCTCAGGCTTATCCGAATGATGCATTTGGCTACGCCCGCCTTCATGAATGCGCGGCATAA</cdnaseq>

Protein Sequence

<aaseq>MPGQTYSRLGSLGGAPSPPPVPPAVAAVASLQRGGGGSGRRTPGKGGSASASAAAGWTGVGCGCAARRAARAVLAALHRRQAVFLFAPLLYVAAMLLYMGSIPLDVVPRIVARPAPGSVYRSPQLYARLRADMDADNSTDAVSGSSFAGLPESNGYIYIEANGGLNQQRTSICNAVAIAGFLNATLVIPNFHFHSIWRDPSTFSDIYDEAHFVKRLQNDVRVVEKVPDFIMERFGHNLSNVFNFKIKAWSPIQYYKDAVLPKLIEERLIRISPFANRLSFDAPPVVQRLRCLANFEALKFSNPIATLSETLVSRMKEKSTASNGKYIAVHLRFEEDMVAFSCCVYDGGDEEKKEMNAAREIGWRGKFTKRGRVIRPGVIRMNGKCPLTPLEVGLMLRGMGFSNNTAIFLASGKIYRAEKNMVPLLEMFPLLQTKETLASAEELAPFKDFSSRMAAIDYSVCVHSDAFVTTQGGNFPHFLMGHRRYLYAGHSRTIKPDKRKLAILFDNPRIGILFLGRRIVHGGTPNKARCAQAYPNDAFGYARLHECAA</aaseq>

Gene Sequence

<dnaseqindica>1..445#1496..1563#1689..1777#2425..2622#3278..3482#3552..3719#3898..4065#4147..4337#5578..5681#6088..6101#ATGCCGGGCCAGACGTACAGCCGCCTCGGCAGCCTCGGCGGCGCGCCGTCCCCGCCGCCGGTGCCACCGGCTGTGGCGGCGGTGGCGTCCCTGCAGCGGGGCGGGGGCGGGAGTGGGAGGAGGACGCCGGGTAAGGGGGGCTCGGCGTCGGCGTCGGCGGCGGCGGGGTGGACGGGGGTCGGGTGCGGCTGCGCGGCGAGGAGGGCGGCGAGGGCGGTGCTCGCGGCGCTGCACCGGAGGCAGGCGGTGTTCCTGTTCGCGCCGCTGCTGTACGTCGCGGCCATGCTGCTGTACATGGGGTCCATCCCGCTCGACGTCGTGCCGCGGATCGTCGCGCGCCCGGCGCCCGGGTCGGTGTACCGCAGCCCGCAGCTGTACGCGCGCCTCCGCGCTGACATGGACGCCGACAACTCCACCGACGCGGTCAGTGGCTCCTCCTTTGCAGGTTTACTGCTGTGTGTGTGTATTTCAGTTGCAATGTGGCACAAATGTCTGACCATTATGATGATTAGCTGTGTCTGCTCCTGTAATGTTCGTATTGGTTTGGTGTAGAGAGTGTTTCAGTTAACTGAGATTTTGTTTGCTCTTTCGCAAATTTATGTTGTTGCGAGGTGACAGGGACAGCTAATTTTATATCAAATCTGAAAATGGGCGACTTAAGCTTGCACTAACAAAATTCTCAGCCCTTGCAACTGCAAGGCCATTGATTGCCTGACTAAGAATTGTTTAATTTCTGCTACCCTTCCAGTTGTTCTAAATTGCTCGGTGGGTAGATTGCTCTTCATCAGCTGTCATGAAATGACTGAGTGATGAATCAAATTAGAACTAAGCGGGTGTGTATTCTGTACCCATCTTATATGATGCAATACTTATGCAAAGGATCTTCAGTAAAGCATGTTAGTTAGAGTGGTGTACAAGAACATTCTTTTTCATGTATTTGCAGATGTTTTCCTTTCCTATTTCAAATTAACTGTAGCAATGGTCACTTCTTATTTACTTTTGTGCTATTTCCATCTTTGGTTGTTTCACTCGGACTGATATTTTTCTAGCTTGCAACCCTGTGGAGGTACAAAGGCAGTCTCTGGCGACCTTGCATAAACAATGCTACCAATAGTATGTCATTTACTGGACTTAACCTTCTCTTTTCTTTATGGAACAAGACACAATAGATGTTAAAGTTTGCCCATGTTCCTGTTTTCTAAAATTGCTTATTTTTCCTTCAGGAATGTTTTTAATGTAATCCAATGAGTTTTACTTGTTATTTTTCCATAAACATATTACACCTATGTTGTCACATAATTGGGTAATTGGGTAACATAGAAAGAGTTAGCTTATGAGGAATTTAGATATTTTTGAACATGTTCAATGCATGATTATATCTCCCTCTTTTTTTGGCAACTTCCATGCCATGTGGGTGGGTGCCTTTTTTACACAATCGAATGCTGACAGTATTTCAGGTTACCACCTTACAATCTTTTTTTTACTTTTTTATTAGGTCTGCCTGAATCAAATGGATACATATATATTGAGGCAAATGGTGGTTTGAATCAACAAAGGACATCGGTAATTGCTTCTCCTCAGCAGTTCATTCCTTCCAACAGTTTACATTCGTTCTCGCCATGCCTTTTGTTTGTCTATCTTGAGTTACTCACTTTTGTTTCACTTGTGTTTTTCTTTCTGGTTTTCAGATATGCAATGCGGTTGCTATCGCCGGTTTCTTGAACGCCACTCTTGTTATCCCAAACTTCCATTTCCATAGTATTTGGAGGGATCCCAGGTATTTTCTTATTAGACTTAGCAGTTAGCACGTAAAACTGGCATGACAGAGTTGGACCCTCTCGTGAATTAAAAAATGCCATACACTAATCACCTTCTAATAGCAGAGAATAAAATAATGATTGCATGCATAACAAAGGATGTAGGAGGTGTTAACAGAATGTAAATGCGTGCTTGCATGGTTGTCAACTTGTCACATTGTCATCTGCACTAGTTCTCCCATTCTATGGCTGCATATTCTTAAGATCACATATACAAATTTGTAGATGTGGAGAGTGACTTGTACATGACTGCACAGGTATCACATAAAAAGGCCAAAGTTTGTAATGGTTGTTTCTTAGTTGTCTGTCATATCAAGTACTGTAAGAGTTATTCTGGCAGTTCTAAAAGTATGTGATTAATCAATTCTAGCAGACACATTGGCTGACTTGTTTGTTGAATGGATGTAGCTTTGGGTCACCTGTTGCAAACTTGCATTCTTATCAAGTTCTTTAACGATCATTGTTTTTTTGGAAATGAATTCAACTGTTCTATACACTTAGTAAACGTTGATCTATATGACTGAAGAAAGTAACATCTATGGTTATTAGAAATCGATGCTTATGGTAACAAAAAAAAACAGTTACTGATATATCCTTTTGGATACAGCACATTCAGCGATATTTATGATGAGGCTCACTTTGTAAAACGTCTTCAAAATGATGTACGAGTAGTTGAAAAGGTGCCTGATTTTATAATGGAGCGATTTGGCCACAATCTTAGCAATGTATTCAATTTCAAGATAAAGGCTTGGTCCCCTATTCAATACTACAAAGATGCTGTTCTTCCTAAGTTGATTGAGGAAAGGTGAGATAGAAACTAATCCAGTTATTTATTTAATGACTTAAACTTACATATGCACCCGATTTTCCCCAATATCCTCACTTGGACCAGGCCGACCCAATGCCTGCAACATTTTGGACTCACTTGTTTATTATTGTAACATGTAGATTTCGTTTTGTCTTTATAATCTTAGATGTAGTTAACATAACCTCATTATATGATTACTATAAAAAGAGTATAAAACTTAGAGAAACTGCGCTAACAGGGAATCACCAAAGAAAGTTGATTCAGACATCCCACCACATAATTTTGTTTTTACTCAATGTTGTATTGACCTATAATTATTTAGTGTAGAGCATCCTAATATTAACAGTTTTCACTCACCTATAGTGTGTATCATCTCTTTAACCCATATCATTAAATTTGTCCTAGTGGGATTCCAGAATCTTGGATATCAGCCATAGGAGTTTGAGTCACCATTCTAAAGAATGTTAAATTGGTTACAGCTTGATGGCCTGATGCTTCTCTCTACATCTAGATGGATCAATAAATTATGAAATTTGTAGAGTTAGTAGCAAAGGACTGTTTCCCTGTTTACGTAGATACGTAGTCAAGATAAAATTTTGCCTGATGCTGTTTGTTTAAAAAGTGACATCTTTTACTACTATGCAAAGCGCAGGCTCATCAGGATTTCACCCTTTGCGAACCGGCTGTCATTTGATGCCCCTCCAGTTGTTCAACGGTTGAGATGCTTGGCTAATTTTGAAGCTTTAAAATTTTCCAACCCAATTGCGACTCTATCTGAGACCTTAGTCTCTCGAATGAAAGAAAAAAGCACGGCGAGCAATGGGAAATACATCGCGGTGCATCTTCGTTTTGAGGAGGTTGGATTCTTTCCTAGAAGATTTACCTATCTTTAGTAGCGGAGGTATCCACTAACTGTTTCCTTGCAGGATATGGTTGCCTTCTCATGTTGTGTCTATGATGGTGGTGATGAGGAGAAGAAGGAAATGAATGCAGCCAGAGAAATAGGTTGGAGAGGGAAGTTCACTAAGCGAGGACGTGTAATAAGGCCAGGAGTGATAAGAATGAACGGAAAATGTCCACTCACACCTTTGGAGGTACTACCATGTCTAATAGCAGAAATACTGCCCATAGTGGAGTTTTAGAACTTTCGTCTCAATCTCATTATGCTGCTCCATGCTCTTCTCATTTTCTTTTCACCCATAACATCAATTTAATATAGGAACACTGCAGGAATTATCAGGAAGATTTACTTGCTTATGTTACAATTTTCAGGTTGGGTTAATGCTTCGTGGAATGGGTTTCAGCAATAATACTGCAATTTTTTTGGCTTCTGGAAAAATTTACAGAGCTGAGAAGAACATGGTTCCTCTTCTTGAAATGTTCCCTCTCCTACAGACAAAAGAAACTTTAGCATCTGCTGAGGAACTTGCTCCATTTAAGGTATTGTGGTAGTTGCAACTTCTCTTTGTGTGGTTCTAGATTTTGTTCTATTCATTACTCTAAAGGATTTGTGGTTGCCAGGATTTCTCCTCGAGGATGGCTGCTATTGACTACAGTGTTTGTGTCCATAGCGATGCTTTTGTGACTACACAAGGTGGGAATTTCCCTCATTTCCTTATGGGTCACAGGAGATACTTGTATGCTGGGCATTCAAGGACAATTAAACCAGACAAAAGAAAACTAGCCATACTATTTGACAATCCACGTATTGGGTATGATGTTGTGCCGTGCATTTACTTTTATGTACTTTTTTTTCAGGCCGTATAGCATTTTCTACGCTATAAACTTCATGTTGATAGTCAATTTTCTCTGTTTCTCTGCAGATGGAAATCATTGAAACGGCACTTGCTTAATATGAGAACACACAGTGATGCCAAGGGGGTTGAAATGAAAAGGCCTATTGAATCCATATACACCTTTCCCTGTCCGAACTGCATGTGTCGCTTGAACAGAACAGAAAATTCTAAACACAATCAAACTAGATAGCATCTCAAGTGCCATTTCAGTGGACTAACTTTATTCTTTCTGGCTTCATGGTATAATTGGTTCTGGTTCATTACTTCAGTGAGCATTACCTTATCACATCATTGTACAGTAACCCATTCTTTTCCGGTGACAGTTTTTTTCTTTGTCCTTGAATCATAGTCCATCCTGGAGCTAAGAACTAACAATACATTTGCTCATTAGCATTCAACAAACAGATCTGACACCTGTAGAGCTGTAGTTGTAGTCAGTGAAATATCAACCAGTTTGATGTAGTACTAACCCTTGTACATGTGTATAGTTGACAATATGATGTATGATACTATACAAATTTTGAATGGACAACAAGTATTTGTGAATTTGATTTTTGTTTTTTCTATCTTGCTCTAAAAATGGCAGCTACCACCATTTTCCCCCTTTGTGTTCTATAGCTAGGTCTTCTCCTCTGTTGCAACTTTGTCTGACACTGCACTATTTTCAACTGAAATAGCAAGATGCTCTACTTGATTATCTCTCATGTTGACCCAAAAATACTATCATCTCACTTTTATATACTTGTCAAGCTGCTTGGTGATGAGAATCTCTGAAAGATTACCCCAATTGATCAAGTTTTTATCATCTGTTCATCTTCTGCACATGGTAAACCATTCCTTCCTTGTTTGTACATGTATTCTGAATACTTCATTGAGTTCATTCTGGTGTAGTAGGACCGAACATTTAACTTTGGCAGAGCCAGCAGCAGGCTTTGGTCACTGAAGTCTGAAGGTGGTTCACATGCAAGACCGTTGGTGAGCAATGGGAATCTGGGTCTGACGAATACTCGTTCATATTAAACGACAAGTCTTGACGAAATGAAGCCAGTCTGCCTGCCAGTGAGCTCAACATGTCTGATTTTAGCTTCCCTTTTCTTTTTTTTTCCTTAAAAATGGCAGATTTAGAGTAACCCTTTTCATCATCCTTTCTTATCAGCATCCTATTTTTGGGGAGGCGCATAGTTCATGGAGGTACTCCCAACAAGGCTCGCTGTGCTCAGGCTTATCCGAATGATGCATTTGGCTACGCCCGCCTTCATGGTGAGAAAAAAAGGTTTTCCTTTCCTCTTGCCTTTCACGTGCTTTGTTTCCTCCCCCCAAAGAAATCTCTCTATCGGCAGACAAACAACTGAAGCCTGCATTAAAAAGAGCAAAAATCATTAGCCAAAACTATTCTTCCTAGGTGCCTTTTTCCAAAATGAATTTAGTCTAGATCTCATGCAAGTACTGATCTGTAGGTCCTGGGCAGTTTAATGAAGGCGTTCTGGCTCTTTTTTTTTTCTTTTTACCTGCCCTCTATTGGGCTTAGATGTTTGATGTTTCGTTACATAAGATATAGTGGGTAAGAAATGGAATCCGCTCTTCATGAAACACAAACTGCAATAGCAAATAGGAGACGGATTTTTTTGTCTTGCACTCTTACCTGATTCTTGATTCTTCCATGTAGAATGCGCGGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019988

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA019988&oldid=48744"