BGIOSGA020130

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Revision as of 03:03, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020130| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020130, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA020130

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020130, complete gene.

LocusTag

OSJNBA0017K09.6

Ensembl Transcript ID

BGIOSGA020130-TA

Ensembl Protein ID

BGIOSGA020130-PA

Length

5626

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26140698..26146323

Sequence Coding Region

26140698..26141994,26144411..26144545,26144669..26144841,26145106..26145316,26145394..26145631
,26145741..26145891,26146015..26146323

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26140698..26146323 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26140698..26146323 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCATCCATCAGCTCAGCTTCGTGCTCCTCCTCATGCTGCTCGCGCCGGCGACGTCGCGTGCCCGCGACAGCATCGCGCCGGGCGAGCCGCTCGCGGGCCACGACACGCTCGTCTCTGCCGGCGCCGGCGACGGCGGCGGCTTCGCGCTCGGGTTCTTCACCCCGCCGGGATCCAACGACACCTACGTCGGGGTGTGGTACGCGCGGGTGTCCCCCCGCACCGTCGTCTGGGTCGCCAACCGCGCCGACCCCGTCCCGGGCCCCGTCGACGGCAACGCCGGCGCCACGTTGTCCGTGTCCCGCGCCTGCGAGCTCGCCGTCGCCGACGCCAACTCCACCGTCGTGTGGTCGGTCACGCCGGCGACGACAGGGCCCTGCACGGCGAGGATACGGGACGACGGCAACCTGGTCGTCACCGACGAGCGCGGCCGGGTGGCGTGGCAGGGGTTCGACCACCCCACCGACACGCTGCTCCCCGGGATGAGGATTGGGGTGGACTTCGCCGCCGGCAACAACATGACGCTGACGGCGTGGAAGAGCCCCTCCGACCCGTCGCCGAGCTCTGTGGTCGTGGCCATGGACACCTCCGGCGATCCGGAGGTGTTCCTCTGGAACGGGCCGAACAAGGTGTGGCGCTCCGGCCCCTGGGACGGCATGCAGTTCACCGGCGTCCCGGACACCATCACCTACAAGAACTTCAGCTTCAGCTTCGTGAACAGCGCCCGGGAGGTCACCTACAGCTTCCAGGTGCCCGACGCGAGCATCATGTCGCGGCTGGTGCTGAACAGCAGCGGCGGCGGGCTGGTGCAGCGGTGGACGTGGGTGGAGGCGGCGGGGGCGTGGAACCTGTACTGGTACGCGCCCAAGGACCAGTGCGACGCCGTGTCGCCGTGCGGCGCCAACGGGGTGTGCGACACCAACAGCCTCCCCGTGTGCTCCTGCCTCCGCGGGTTCGCGCCGCGGTCGCCGGCGGCGTGGGCGCTGCGGGACGGCCGCGACGGGTGCGCGCGGGAGACGCCGCTCGGTTGCGCCAACGGCACCGACGGGTTCGCCGTGGTGCGGCACGCCAAGGCGCCCGACACGACCGCCGCGACGGTGGACTACGACGCCGGCCTCCAGCTGTGCCGGCGGAGGTGCCTGGGCAACTGCTCGTGCACGGCGTACGCCAACGCCAACCTCAGCGCGCCGCCCGGGCGCCGCGGCTGCGTCATGTGGACCGGCGAGCTGGAAGACCTTCGAGTGTACCCGGCCTTCGGCCAGGACCTCTACGTCCGCCTCGCCGCCGCCGATCTCGATTCAACAAGCAAGTCTAAGAAGAAGACGCACATTATAATTGCAGTAGTTGTCAGCATCTGTGCGCTGGCAATTATTTTAGCCCTTACTGGGATGTACATTTGGAGAACAAAGAAGACAAAAGCAAGGCGACAAGGACCAAGTAACTGGAGTGGTGGTTTACACAGTAGAGAGCTCCACAGTGAAGGAAATAGCCATGGGGATGACCTGGATCTGCCTCTATTTGATTTGGAGACAATAGCATCAGCCACAAATGGTTTCTCAGCAGACAACAAACTTGGAGAAGGTGGCTTTGGGCCAGTATACAAGGGTACACTAGAGGATGGGCAAGAAATAGCAGTTAAAACACTTTCAAAGACGTCAGTACAGGGTCTTGATGAGTTCAGGAATGAGGTTATGTTGATAGCTAAACTCCAGCATCGAAATCTTGTTCAACTTATTGGCTACAGCGTTTGTGGACAAGAAAAGATGCTTCTATACGAATTTATGGAAAACAAAAGCCTGGACTGTTTCCTGTTTGACAAATCCAAGAGCAAGCTACTTGACTGGCAAACAAGATACCACATAATCGAGGGGATTGCCCGAGGTTTGCTGTATCTTCACCAGGACTCAAGATATAGAATCATCCACAGAGACCTGAAGACAAGCAACATTCTTCTGGATAAGGAGATGACTCCTAAAATTTCAGACTTTGGTATGGCAAGAATGTTTGGCAGTGACGACACGGAAATAAATACAGTTAGAGTGGTTGGCACATACGGCTATATGGCCCCCGAGTACGCAATGGATGGAGTATTTTCAGTGAAATCAGATGTATTCAGTTTCGGCGTCATAGTGCTAGAAATCATTTCTGGTAAAAGGAACAGGGGTGTCTACAGCTACTCCAGCCACCTAAACCTTCTAGCACGTGCATGGAGCTCATGGAGTGAAGGGAACAGCCTCGATCTCGTCGACAAAACACTGAACGGCTCATTCAACCAAGAGGAAGTGCTAAAATGCCTCAAAGTGGGGCTCCTATGTGTCCAGGAGAACCCGGACGACCGTCCTCTCATGTCCCAGGTGCTCCTGATGCTGGCCAGCGCCGATGCCACCTCATTGCCAGATCCCAGGAAGCCTGGGTTCGTCGCAAGAAGAGCTGCAACGGAGGACACGTCGTCGAGCAGACCAGACTGCAGCTTCGTGGACAGCATGACCATCACCATGATCGAGGGCAGGTAG</cdnaseq>

Protein Sequence

<aaseq>MAIHQLSFVLLLMLLAPATSRARDSIAPGEPLAGHDTLVSAGAGDGGGFALGFFTPPGSNDTYVGVWYARVSPRTVVWVANRADPVPGPVDGNAGATLSVSRACELAVADANSTVVWSVTPATTGPCTARIRDDGNLVVTDERGRVAWQGFDHPTDTLLPGMRIGVDFAAGNNMTLTAWKSPSDPSPSSVVVAMDTSGDPEVFLWNGPNKVWRSGPWDGMQFTGVPDTITYKNFSFSFVNSAREVTYSFQVPDASIMSRLVLNSSGGGLVQRWTWVEAAGAWNLYWYAPKDQCDAVSPCGANGVCDTNSLPVCSCLRGFAPRSPAAWALRDGRDGCARETPLGCANGTDGFAVVRHAKAPDTTAATVDYDAGLQLCRRRCLGNCSCTAYANANLSAPPGRRGCVMWTGELEDLRVYPAFGQDLYVRLAAADLDSTSKSKKKTHIIIAVVVSICALAIILALTGMYIWRTKKTKARRQGPSNWSGGLHSRELHSEGNSHGDDLDLPLFDLETIASATNGFSADNKLGEGGFGPVYKGTLEDGQEIAVKTLSKTSVQGLDEFRNEVMLIAKLQHRNLVQLIGYSVCGQEKMLLYEFMENKSLDCFLFDKSKSKLLDWQTRYHIIEGIARGLLYLHQDSRYRIIHRDLKTSNILLDKEMTPKISDFGMARMFGSDDTEINTVRVVGTYGYMAPEYAMDGVFSVKSDVFSFGVIVLEIISGKRNRGVYSYSSHLNLLARAWSSWSEGNSLDLVDKTLNGSFNQEEVLKCLKVGLLCVQENPDDRPLMSQVLLMLASADATSLPDPRKPGFVARRAATEDTSSSRPDCSFVDSMTITMIEGR</aaseq>

Gene Sequence

<dnaseqindica>1..1297#3714..3848#3972..4144#4409..4619#4697..4934#5044..5194#5318..5626#ATGGCCATCCATCAGCTCAGCTTCGTGCTCCTCCTCATGCTGCTCGCGCCGGCGACGTCGCGTGCCCGCGACAGCATCGCGCCGGGCGAGCCGCTCGCGGGCCACGACACGCTCGTCTCTGCCGGCGCCGGCGACGGCGGCGGCTTCGCGCTCGGGTTCTTCACCCCGCCGGGATCCAACGACACCTACGTCGGGGTGTGGTACGCGCGGGTGTCCCCCCGCACCGTCGTCTGGGTCGCCAACCGCGCCGACCCCGTCCCGGGCCCCGTCGACGGCAACGCCGGCGCCACGTTGTCCGTGTCCCGCGCCTGCGAGCTCGCCGTCGCCGACGCCAACTCCACCGTCGTGTGGTCGGTCACGCCGGCGACGACAGGGCCCTGCACGGCGAGGATACGGGACGACGGCAACCTGGTCGTCACCGACGAGCGCGGCCGGGTGGCGTGGCAGGGGTTCGACCACCCCACCGACACGCTGCTCCCCGGGATGAGGATTGGGGTGGACTTCGCCGCCGGCAACAACATGACGCTGACGGCGTGGAAGAGCCCCTCCGACCCGTCGCCGAGCTCTGTGGTCGTGGCCATGGACACCTCCGGCGATCCGGAGGTGTTCCTCTGGAACGGGCCGAACAAGGTGTGGCGCTCCGGCCCCTGGGACGGCATGCAGTTCACCGGCGTCCCGGACACCATCACCTACAAGAACTTCAGCTTCAGCTTCGTGAACAGCGCCCGGGAGGTCACCTACAGCTTCCAGGTGCCCGACGCGAGCATCATGTCGCGGCTGGTGCTGAACAGCAGCGGCGGCGGGCTGGTGCAGCGGTGGACGTGGGTGGAGGCGGCGGGGGCGTGGAACCTGTACTGGTACGCGCCCAAGGACCAGTGCGACGCCGTGTCGCCGTGCGGCGCCAACGGGGTGTGCGACACCAACAGCCTCCCCGTGTGCTCCTGCCTCCGCGGGTTCGCGCCGCGGTCGCCGGCGGCGTGGGCGCTGCGGGACGGCCGCGACGGGTGCGCGCGGGAGACGCCGCTCGGTTGCGCCAACGGCACCGACGGGTTCGCCGTGGTGCGGCACGCCAAGGCGCCCGACACGACCGCCGCGACGGTGGACTACGACGCCGGCCTCCAGCTGTGCCGGCGGAGGTGCCTGGGCAACTGCTCGTGCACGGCGTACGCCAACGCCAACCTCAGCGCGCCGCCCGGGCGCCGCGGCTGCGTCATGTGGACCGGCGAGCTGGAAGACCTTCGAGTGTACCCGGCCTTCGGCCAGGACCTCTACGTCCGCCTCGCCGCCGCCGATCTCGGTATGTTTCACTTCACCGTCTGATACAGTTGTTTTTCTGGTCCTTCCTGCAATTATTTCTCGATCCATGATTGCACACTGGTTAGTGAGTTTTTTTTTTTGGGTGATGTCATAGGACGTTTTACCTCATGAGATGTTTAAAGTTACTCCTAATACCATAGGAATAGTTACACAAATTATGACAAACTATAACAAAAACGGGTATAATCTGAATTTATTATCCGACATGTTTCAAGTTTAAAATTTTAACCCGAACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGACTAGGTACACAATGCAGTATGCACTAATCACAAGTGAATTAGTCCTTTTTTCCCCACGCCATGTAGATTGAGTTTAGCTATGAATTTCCTTTTTGCCATTTAGTATCTGTAGATTACTACTAGATTGTCATGATCAAAGTAGCAAAGGAACCAAGGTAGACCGCTTTTTATTGCGGAAAAGCAGTCAGATGTATGCATTCATATGTTTCTAAGTCAGTACTAGTTCAGTCAGTGAGAGGGCACTATTTCTTCTGCTCAAGTTAGCTGTGAACTTTACTGTAGCATTCAAGTCGAACTTGCTTCACGTAACTTGTTTTTAAAAAAAATAAAGAAAAAGAAAACTACTTCATGGATAAACTGGACCTTACCTAACCTGTGCCTTTGTAGCCTGTAAGTCCCATCTCCACGAAGTAGAAAACATTCCTGTATTGTGCCTTTCAGTTTCAGATGCTCTGCCGGTCTGCCCAACCCACATACTCCTATGATCCTATCCCTCTATTTATCTGATGCTGTACTGCAATCCAATGAAAGCGAGATTAGAAAAAAAAAGGTTACCTGACAATGTATGAATAGATTCATTTCCAAGTAACCCCAGAATTATTGGGAAGACTTTTTGTGCCCGTCCAATCATTCATCCACAGTTCATAGCTGTTATAGCTGCACATGATAAACCGGTACCTTACCCGGCAACTTAGCGTGTTTCACTTCGCTTCGGCCCTGCTTCTGCATAGCTCCAGTCCTAATCTTATCTGCCTGACGGCACTGCTAAGCAAAATGGACACGACTGTTTTCTTCCCTTACCTGAGACATGAACACGTTATTTTCGTGTTGCATCAGTACAAGTCGCCATCGCTGATAAGTAAAGTCCATGTTACCATCTAGTCCAAATTTTAGCCTGCAGACAGAATCACAGAATAGAATGAGTAATACTACGTAGTTAGCAATGACTCAGGCATGCATGAATCAATATGAGTTTATTGCATGTGTTGTGTTTTTGACATGTGGTTAATGTGCATGAGCCATGAGGTCCAACCCCTACGATGTTGCATCCACAAAATTCAACTGGAAGCCTGGAAGCGACCAAAAAGTTTGTTAGTTTCACATGTTAGGTGGTCAAAATGAATATGCGTTACATTGGTAAATGGGAAAACATACCAATTTGCCTTCTAATGGAGCTCAGCAGATGATGTTAGATAGCCTACCTCAATAACATGAGTAAAACTTACGGAACAGTAGCACCATATCCATATATATGTTCCATTTTCAAAGGATCATCAAGCCAAAAGCAAGTAAACAAAATCAGCGTACCCTGACTTGCTGGTGCCTGGTGCCATCACAAATTTGTGTTGTCACCTTCATGGCTAGCAACACGCGACTGAACTATCTGCAGTGAATCGATGTGCACTGCAACTCCAGGCTATTGCTGATGGGGTTAAGGTGGCACCCCCTTTCCAGCACTGCAACATGATCTAAACGCTTTAAACAAGGTAAAATCCCATGTTTCCTTCATCGTCCAGATATTTTGGTTGGACAAGAGACAAGATGGAGAAATTCCATCCTCTTTACGCTGCAATATTATTGAAGGCGTGCATGGACCCTCTGCGTTGCATGTTTGTGTTCAGAGTTTCCACGGAACAGGACCACCGATGGTACCAAGGCATCCAGTTAACACAAGTTAATGTGATATGCAATAATGCAATTCATTTGGTGCATTAGAACATTATTATTCAATCTGTGGGGAGAATGTTCAGCATGAACTAGGGAGCTCCCACGAACCATCTCCTGCAAAATATCACACATCATGTTTTACATCCAGAATTTCTTCATTAGATAGCACTACAAAAGGTAGTACTAAAATGGACCAACCTAGAAAATGGATGCCTGAGTTTACCTGATGCATTTGACCATGCTTGCAGGTAGACTTCTGAAGTGAAAATCCAATATAAATTTACGATTCTAAGGCCAATGGTTTGCAATCTTTCTGATATGTTTTCTTGGCAATACTCATTATTTGGCAACCTTCTGAGTTTATACATCATCAGAAGGAATGCTCATGTACAAAAAACTAGACAAGAAAGTTGTAGGTACAGACAATCATGCAGAACTAATAGTTGTTATTCTTGCACAGATTCAACAAGCAAGTCTAAGAAGAAGACGCACATTATAATTGCAGTAGTTGTCAGCATCTGTGCGCTGGCAATTATTTTAGCCCTTACTGGGATGTACATTTGGAGAACAAAGAAGACAAAAGCAAGGCGACAAGGTAACACCTCTGATCCTAAACATATATAGACAAAAATTACCTCTTAAATCCAAATGTAAAAAAGGGGACAAAAATCGATCTTTGTTTGCTTGTGTTTCTTAACTTTGATAAATTTTCAAATAGGACCAAGTAACTGGAGTGGTGGTTTACACAGTAGAGAGCTCCACAGTGAAGGAAATAGCCATGGGGATGACCTGGATCTGCCTCTATTTGATTTGGAGACAATAGCATCAGCCACAAATGGTTTCTCAGCAGACAACAAACTTGGAGAAGGTGGCTTTGGGCCAGTATACAAGGTATGCACAGATATCTAACTAATTCATATATCAGAAGTTGATTACCATAATCAAGGTTCATCTAAGATTTCACAAACAGTTCCTTGACTCAAACACATCATGATAGCTAATGTTAGCAACGGAAGCATCGGTAAATCAAAATTTTATGTCTTGCAGGACACAAGTAATAGTTGAAATAACCAGCAAAGATGGCATTCTAACTTTTCACATACTATGAAATGTCAGTACACACCTGATTGAAAGTACTTGACTTCAAAATTACAGGGTACACTAGAGGATGGGCAAGAAATAGCAGTTAAAACACTTTCAAAGACGTCAGTACAGGGTCTTGATGAGTTCAGGAATGAGGTTATGTTGATAGCTAAACTCCAGCATCGAAATCTTGTTCAACTTATTGGCTACAGCGTTTGTGGACAAGAAAAGATGCTTCTATACGAATTTATGGAAAACAAAAGCCTGGACTGTTTCCTGTTTGGTATGCCTTTAACCTTTGTGAGCATGAAAAATTCCATATCTATCAAGGAACAAACAGAAATCTTCCTATGTTCTCAGACAAATCCAAGAGCAAGCTACTTGACTGGCAAACAAGATACCACATAATCGAGGGGATTGCCCGAGGTTTGCTGTATCTTCACCAGGACTCAAGATATAGAATCATCCACAGAGACCTGAAGACAAGCAACATTCTTCTGGATAAGGAGATGACTCCTAAAATTTCAGACTTTGGTATGGCAAGAATGTTTGGCAGTGACGACACGGAAATAAATACAGTTAGAGTGGTTGGCACATAGTAAGGACCGAATAACAAACACGTTTTAATACACAATTTATTAATCTCCTAGTGTTGACTTTGTCATTTAATCTCCTAAAATTGACTATCTTTTCATGGTTTTCTACAGCGGCTATATGGCCCCCGAGTACGCAATGGATGGAGTATTTTCAGTGAAATCAGATGTATTCAGTTTCGGCGTCATAGTGCTAGAAATCATTTCTGGTAAAAGGAACAGGGGTGTCTACAGCTACTCCAGCCACCTAAACCTTCTAGCACGTGTAAGCATGAATCTGACTCATTTACTCTACGACAATTGATGTTGATTTGATTAATTGAAACCACAACCAAGAAAATATCTCTGAACCTTTTTTTGCCGACTAAATCCTCTAAGCTTTTACCAGGCATGGAGCTCATGGAGTGAAGGGAACAGCCTCGATCTCGTCGACAAAACACTGAACGGCTCATTCAACCAAGAGGAAGTGCTAAAATGCCTCAAAGTGGGGCTCCTATGTGTCCAGGAGAACCCGGACGACCGTCCTCTCATGTCCCAGGTGCTCCTGATGCTGGCCAGCGCCGATGCCACCTCATTGCCAGATCCCAGGAAGCCTGGGTTCGTCGCAAGAAGAGCTGCAACGGAGGACACGTCGTCGAGCAGACCAGACTGCAGCTTCGTGGACAGCATGACCATCACCATGATCGAGGGCAGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020130