BGIOSGA020149

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Revision as of 03:04, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020149| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020149, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA020149

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020149, complete gene.

LocusTag

OSJNBB0013J02.4

Ensembl Transcript ID

BGIOSGA020149-TA

Ensembl Protein ID

BGIOSGA020149-PA

Length

6185

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26497286..26503470

Sequence Coding Region

26497286..26497288,26497695..26497878,26498427..26498443,26498891..26498979,26499325..26499536
,26499924..26500031,26500206..26500398,26500858..26501116,26501202..26501258
,26501336..26501383,26501691..26501777,26501851..26501908,26502050..26502117
,26502245..26502340,26502449..26502505,26502627..26502716,26502872..26502918
,26503150..26503176,26503278..26503470

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26497286..26503470 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26497286..26503470 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGAAGCAAATCCATGAGATCAAGGACTTCCTTCTCACAGCGAGGAGGAAGGATGCCCGCTCCGTGAGGATCAAGAGGAGCAAGGATGCCGTCAAGTTCAAGGTGCGCTGCTCCAGGTACCTCTACACGCTGTGTGTACATGACACTGACAAGGCCAACAAGCTGAAGCAGTCTCTCCCCCCAGGCTTGACCGTTCAGGAGACTGATCTTAAGCTACAGTATTCTGACATGGAGGATGCCAAGACACGTGGAACTGGTGACGTGGCATTCTCCCAGTGGCTACGAGGGAGTTGGCCTACAAATATTCCAGCGTCGCACTGGGAAAGCAGCAAAGCGTACAGCCGAGCTACCACCACTCTCCGGCGCCGGCGAGCGGCGGACACGGCGACGGCGATGGGTCGCCTCCGCCGCGGCGGGGTCGGTCTCCTGCGTGGTGCCGTGGTGCTCGCGTCGCTTCTCCTCGTCGTCTCCGGCGAAGTCATCTTCGAGGAGCGATTCGATGATGATTGGGGGAGCAGATGGGTGAAATCTGACTGGAAAAAGAGCGAAGGGAAAGCCGGGACATTCAAACATACAGCAGGGAGCTATTCTGGAGATCCTGACGATAGAGGTATACAAACAACCTCGGATGCTAAGCATTTTGCTATATCGGCCAAGTTCCCAGAATTCAGTAACAAGAACCGGACATTGGTGGTTCAGTATTCGATAAAGATTGAGCAGGATATTGAATGTGGTGGTGCTTATATCAAGCTTATGTCTGGTTATGTGAATCAGAAGAAATTTGGCGGTGACACTCCTTATAGCTTCATGTTTGGGCCTGATATATGTGGTGATCAGACAAAGAAACTCCATCTGATACTGTCTTACCAAGGGCAAAACTACCCTATAAAGAAAGATCTGAAATGTGAAACTGACAAGTTGACACATTTTTACACATTCATTCTTAGGCCAGATGCCTCTTATAGTCTACTTGTTGATAACCGGGAGAGAGAATTTGGTAGTATGTACACTGACTGGGACATCCTCCCTCCTCGCAAGATCAAAGAATCTAATGCGAAGAAGCCAAAAGATTGGGATGACAGGGAATATATTGAAGATCCTGATGAAGTTAAACCAGAGGGCTATGACTCTATTCCTAAAGAGATTCCTGATCCAAAGGACAAAAAGCCTGAGTCATGGGATGATGATGATGATGGTGTATGGAAGCCTAGAATGATACCGAATCCAGAATACAAGGGACGTTGGAAACGCAAGAAAATTAAGAACCCTAACTACAAGGGAAAATGGAAGATCCCATGGATTGATAATCCAGAATTTGAGGACGACCCAGACCTATATGTGCTGAAACCTTTGCAGTATGTGGGAATTGAGGTTTGGCAGGTGAAAGCTGGTTCAGTTTTTGACAACATTTTGATTTGTGACGACCCGGAGTATGCAAGAAGTGTTGTTGATGAAGTTAGGGCTGCAAATAAAGAGGCTGAAAAGGAGGCCTTCGAGGAGGCGGAAAAGCGGAGGAAGGCTAGAGAAGACGAGGAGGCTCGGCGTGCACGAGAGGAAGGAGAGAAACGAAGAAGAGACAGGGATCGGCACCGAGGCAGGGACCGTTACAGGGATAGATATAGAGATATAACAGGAAAATCTATAGCTGTATTAAAATTTACAAAGATCAGGGTCATCATCGTAGGTATGACTACCATGACGAGCTATGAGGTCTCCAGATTATCCCATTCTTTCAAGGAACTTCAGGAAGTTAGTGTTGCCCATCGACTATTTCATCACCCAATTGATGATTGTACCAATAAAATAGAACATGTTATTTCGAGGACAGAACAAAGCTTTATTTCAGGTGTGGATAGCACACTACAACACGAACTGATGCTGTTCACCTGA</cdnaseq>

Protein Sequence

<aaseq>MPKQIHEIKDFLLTARRKDARSVRIKRSKDAVKFKVRCSRYLYTLCVHDTDKANKLKQSLPPGLTVQETDLKLQYSDMEDAKTRGTGDVAFSQWLRGSWPTNIPASHWESSKAYSRATTTLRRRRAADTATAMGRLRRGGVGLLRGAVVLASLLLVVSGEVIFEERFDDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDPDDRGIQTTSDAKHFAISAKFPEFSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGPDICGDQTKKLHLILSYQGQNYPIKKDLKCETDKLTHFYTFILRPDASYSLLVDNREREFGSMYTDWDILPPRKIKESNAKKPKDWDDREYIEDPDEVKPEGYDSIPKEIPDPKDKKPESWDDDDDGVWKPRMIPNPEYKGRWKRKKIKNPNYKGKWKIPWIDNPEFEDDPDLYVLKPLQYVGIEVWQVKAGSVFDNILICDDPEYARSVVDEVRAANKEAEKEAFEEAEKRRKAREDEEARRAREEGEKRRRDRDRHRGRDRYRDRYRDITGKSIAVLKFTKIRVIIVGMTTMTSYEVSRLSHSFKELQEVSVAHRLFHHPIDDCTNKIEHVISRTEQSFISGVDSTLQHELMLFT</aaseq>

Gene Sequence

<dnaseqindica>1..3#410..593#1142..1158#1606..1694#2040..2251#2639..2746#2921..3113#3573..3831#3917..3973#4051..4098#4406..4492#4566..4623#4765..4832#4960..5055#5164..5220#5342..5431#5587..5633#5865..5891#5993..6185#ATGGTAAGAGCTTCTCCTCCTCCTACTTCAGCCGCATCTACATTGTTATTCTTGTAGGCCAAAGTTATTAGATCTCCTTTTAGTTCGTGTAGTTTTATTAGCTTGGAGTAGATCTAGCAAGTTTGAGTAGTTTAAAATGTCACCAGAGTTGATGATTTCGTGAGAAATACAATGGATTCAGTTGAGGATTTGAAGATAAATTCTCAATAGATGTTTGATAGTATGATGTTATGTTAAACGTAGCAGCTTCACATCGTTTTTTTTTTTTGTACTGATGTGATAGTAGTATATTTGATGATATTGCATTCCGGAAGTGAAATCATGGCACGCTGGTTAAATAGCCTAATTTATTTCCAATACTATGATTAGCTGCAAGTTTGGGTCTCTTATTCCTTTTATTTTCATATAGCCGAAGCAAATCCATGAGATCAAGGACTTCCTTCTCACAGCGAGGAGGAAGGATGCCCGCTCCGTGAGGATCAAGAGGAGCAAGGATGCCGTCAAGTTCAAGGTGCGCTGCTCCAGGTACCTCTACACGCTGTGTGTACATGACACTGACAAGGCCAACAAGCTGAAGCAGTCTCTCCCCCCAGGTATGCAGACGGGTTCAACCCAGTCTGATCTGGAATCATTTCTTTTGTTTCTAAATGTCTCCATTGTATGGTTTAAATCTGGATGGAACGAGATGCAAGTCTACTACAAATTCAGTGAAGATGTTTACCTAGACATTTTATATATAGCATGGCATAGGCTGTGAAAGCAGTTATCATTCCTACAAATATTGTAGAAGAAAAAAACTGTTATGGAATAGAACATCCTGACCTTTTTTCAGTGTTGTAGTGCAATTCAATTTGTTTTCTTGTAACACTTGTAAAATCCAGATTGCACTAATATATCTGCGCTTTTCTTCCCTATGATTACATTAGATCAGATTAGATATGCTGTTTCAAGCAGAAATCCAAATGTAACATGCTTTTTTGGACACCATTTGAGCTAGATATCCATGCCCTCGAGTAGATAACATTACTGTTAGCTAAAATCTTGCTTGTGTCTTTTTCCTTATGTGCATTATTACTACATTTAGCTCGACTGTATCTCTGGAACTTTTCAGAGAACTGAAATATGCTTGTATCTCTTGCAGGCTTGACCGTTCAGGAGGTTTAAGCATTCGAGACAACAAAGAAAATGGTTCTGTAGACAACTTCTGGGTTTTTCTTGTTTAATTTGGACCCTCGTGGTTGGAAGGAATTGACTGATACGCCTCCGTTTGATATTACAAATGTATTAGTGATGGTCCATGACTTTGCTTCTCATGAAAAATTTGAGATAGTGTAAGGTTGTTTTGTTTTTTCTCAGTGCAATCTTTGGCAGTTGCTACCTTCCATCTGTTAATGTGTGGATAGTTCATAGTAGTATGCTATTGTAACTTACTACTAGTAATACAGTACGTACGTAGTATGTTGTTATGTTTGACTATTTGATATACTTTTTTTTATAAAGTTATTAAATATGTGCATCAATATTATTAAATTGGTAAAATTTTGGTATAGTTAAAATTTGGTAAGGTTTATTTTGGCTAAAATGTGACTTGCGCCTGTGTGTCAGACTGATCTTAAGCTACAGTATTCTGACATGGAGGATGCCAAGACACGTGGAACTGGTGACGTGGCATTCTCCCAGTGGCTACGAGGGAGGTACGGCGAGCTGTGATTGGCTCACCAGAGGTGGACAGTGAATTTGTCACACTTTTGTTCATTTATTTAGTGGGCTGTTTGACGCGGTCGTCGGGGCCCAGTCATGTGGGGCCCATCTGTCAGCTGTGGGCCTGGAAAGTCATGGTCCACCGTGGACTTCTCCAAGTCCACGTCTTCGTGCGACGTCGCCCTCCATCTGGCCGGTCCACCACGGAAGACCGACCCGAATCCCGCAAATGGCCTATCTAAAACCACAAGACTGCCATTCTCTACGAAAGGCTTGCAAAACGTTGAGTGGCATAGGCTGTAAATAGTTCTGATTTTTGAGGTTATTTCGGGCGTCAGTTGGCCTACAAATATTCCAGCGTCGCACTGGGAAAGCAGCAAAGCGTACAGCCGAGCTACCACCACTCTCCGGCGCCGGCGAGCGGCGGACACGGCGACGGCGATGGGTCGCCTCCGCCGCGGCGGGGTCGGTCTCCTGCGTGGTGCCGTGGTGCTCGCGTCGCTTCTCCTCGTCGTCTCCGGCGAAGTCATCTTCGAGGAGCGATTCGATGGTACTGTGTACTACTGTTCCTGTACAAATCTCATTTGGTCTCGTTATCTGTTTTAGCTGTGTTGAACTGGAACGCTCAATTGATTATTACTGCCGCTTACTGTCTCCTCTGCTGCTTATACTAGCTGTTGCTTTCAAATCGAGTTGAATATTTGATTGGATGCATGGGAAGCATTTCCAACCTGTAAATGTTATTCTGCTTCCGTGTTGATACTTTCTTGGTACTGAACTACTTATTGCTGCTTTCATGTTGCCGTTCTTGCTTGTTACAATTGATAAACTCAAAAAAATATATATCTGTTTGTGCCCTTTGGTCAGAGGAAGCTGTGATTATTGTTAAACTCAGAGAGTTTGAGCTAACCAACGGTGCAATGTTTTTCACGTTTAGATGATTGGGGGAGCAGATGGGTGAAATCTGACTGGAAAAAGAGCGAAGGGAAAGCCGGGACATTCAAACATACAGCAGGGAGCTATTCTGGAGATCCTGACGATAGAGGTGAGGGCCTGATTTGGTGCTACTTTCATTACAATTAGCATACTTCATTTATCAAATTAGCACTTCAAAATTCAGTCCTCATGTTTCAACTGTCAAGCCATACGATTAGAGCCTTATTTGTGCTATGAATTATGCCATGAATCATATTGGTAATCTGTGTTGAAACCATGTTAGGTATACAAACAACCTCGGATGCTAAGCATTTTGCTATATCGGCCAAGTTCCCAGAATTCAGTAACAAGAACCGGACATTGGTGGTTCAGTATTCGATAAAGATTGAGCAGGATATTGAATGTGGTGGTGCTTATATCAAGCTTATGTCTGGTTATGTGAATCAGAAGAAATTTGGCGGTGACACTCCTTATAGGTAAATTTGGCTCCCTGTTTTTGATCTGCAAAAAGCTAATGATGCTATTTCTGAATTTGGTCTACACATTGACTCTAAAAGTTCTAACAAGGGCCATATAAAAGATTTTGTATGTGCAAAAGATAAAAAGCTTGAATGCAAATATGCAATTTGTTGAATAGTGAGTAAACCAGAATGTTAAGCCTTAACAGCTAAGCTGGTTTGGTTTACCACAAAAACCTAATAACCCATCCTTACAGTAAAATGGGTTACTATCTTACTAGTATTAAGTACTTGCTAGCCAAATATTGGTTGGTGAATATAGAATGTACCAATTACTTTCCGGTCCTCATGTTTTTTAGATAATGATCCGGTTGTCATTGTCTCATTGTGTTCCTCACTGAACTATTATTGTGTTTTCGTTCTGTCTAATCCTCTTCTGAGTTGCATCTGCTAACATCATGATGTTTACTTTTGCAGCTTCATGTTTGGGCCTGATATATGTGGTGATCAGACAAAGAAACTCCATCTGATACTGTCTTACCAAGGGCAAAACTACCCTATAAAGAAAGATCTGAAATGTGAAACTGACAAGTTGACACATTTTTACACATTCATTCTTAGGCCAGATGCCTCTTATAGTCTACTTGTTGATAACCGGGAGAGAGAATTTGGTAGTATGTACACTGACTGGGACATCCTCCCTCCTCGCAAGATCAAAGAATCTAATGCGAAGAAGGTTTGGGATCTGCAGCATGATTCAGAGAGATGTTATTGTGAGGAATTTCAACAAAAGCTTCTCTTATATTTGTCTTCTCTTGCAGCCAAAAGATTGGGATGACAGGGAATATATTGAAGATCCTGATGAAGTTAAACCAGAGGTTTGCAATTTCATATTTGTTATACATTGATAATACAAATAAAGAACGTTATGTAATCTTTTACCTTAATTTTCCAGGGCTATGACTCTATTCCTAAAGAGATTCCTGATCCAAAGGACAAAAAGGTTTGCACTTAAGAATTACGCTGTAAATCCAGCTTCTAATATTTTCGCATTTAATTGGCATATCCGTTTATAATGGACATAGTGTCATATGTTCTTAATATTATGAGAAGAACCCGAGTGCAGACAAAGGTTCCATTTTACCTGTTCAAGCTTGTTTCATTAGAAACATCCTATGGCATGTTAGCATTTTCTATCTGCTATTAGCTATATTGAACCCAGCATGACCTCAATGGCTCTTATGGTGTGTTTGCTAAGTTAATAAATATAACACAGGATGACATATGTTTTCCTTTCTACACTAAATCAGCCTGAGTCATGGGATGATGATGATGATGGTGTATGGAAGCCTAGAATGATACCGAATCCAGAATACAAGGGACGTTGGAAACGCAAGGTTTGTTTTATTGACTGATTAGCTCCTCATTGCCACATTTTGTAGCATTTTTTTAACATGCTTCTGTACGCAGAAAATTAAGAACCCTAACTACAAGGGAAAATGGAAGATCCCATGGATTGATAATCCAGGTGAGAAATGGTGGGCTTTTTTTTTTTAACAGTACTATGTTAGCGTTTTTCATTTCTTGCTGCATATCTGACTTAGAGCTGGACCTCACCTCCTTCCAAATTTGAAGTGAATATTAAGTGATGTATATGCATCTTTCACAGAATTTGAGGACGACCCAGACCTATATGTGCTGAAACCTTTGCAGTATGTGGGAATTGAGGTTTGGCAGGTATTATATTTCTTGGTTAAAGATGCTTGTTCTGTTGGAATGCTGCTTCTAGGCTGTGTCAAACGACACAGTCCTTTACATGAATGGCATAAATGCTATGTAAGCTAACATTCCAGGTGGTATGCAGGTGAAAGCTGGTTCAGTTTTTGACAACATTTTGATTTGTGACGACCCGGAGTATGCAAGAAGTGTTGTTGATGAAGTTAGGGCTGCAAATAAAGAGGTAGGCTCACCTGGAATAACAACACAGAACGCATATTTGTAAATTTATCCATGCCATTAGTTTCATGTCATGGAAACCCCCATTTCAATATATTTTTCTGTGTTGTAGGCTGAAAAGGAGGCCTTCGAGGAGGCGGAAAAGCGGAGGAAGGCTAGAGAAGACGAGGTTTGTGATTGCTTTTAGTTCACTGGTTACTCTTCTGTTTGTTCATTATTATGAAGAGTTGGGTCTTGTGACTCAGCAATTCCAGTTCATAGGGAAGCTAACAGATGCTTCTTTTCCACAGGAGGCTCGGCGTGCACGAGAGGAAGGAGAGAAACGAAGAAGAGACAGGGATCGGCACCGAGGCAGGGACCGTTACAGGGATAGATATAGAGTACATTTCTTCTCCCTGCTATCATGTGGAATACTTTCTTCCTTCTACAATTCAGCTGGTCTTTTTACTCCTTTCAGAGAGGGGTTGCCTCTAATATATCAAACACCGACCATAATAATCTATCAAAAATTTTAGCTTGTATCTGCTTGCTTTAGGATATAACAGGAAAATCTATAGCTGTATTAAAATTTACAAAGATCAGGTAAAAGATAGGTAGCAAGAAAAAAAAGTAATAGACATTCTGTCAGCAAAACATGTAAGAATTCTAGACATCATCACTGTGGAGACATGTAGAGGTAGTGTGCGTGCTAACCACTAACTGTCATATACATGTACAATTTGCTAATGCTGATGCATAGGCTAGTATCAGTAATATGACACCGGTTGATGGCCATCACAACTGACATCTTATTTTGTTTCTCTACATTTGCAGGGTCATCATCGTAGGTATGACTACCATGTAAGTTACAAAACTTCTCCATTTGCTTGTATCTCTAGAACTGCCAAAGGTACAGGAGAAACAGTTCAGTAACATTTTCAATCTGTTGGTTTCATATTCAGGACGAGCTATGAGGTCTCCAGATTATCCCATTCTTTCAAGGAACTTCAGGAAGTTAGTGTTGCCCATCGACTATTTCATCACCCAATTGATGATTGTACCAATAAAATAGAACATGTTATTTCGAGGACAGAACAAAGCTTTATTTCAGGTGTGGATAGCACACTACAACACGAACTGATGCTGTTCACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020149