BGIOSGA020175

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Revision as of 03:04, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020175| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020175, complete gene.| tag = OsI_206...")
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Gene Name

BGIOSGA020175

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020175, complete gene.

LocusTag

OsI_20603

Ensembl Transcript ID

BGIOSGA020175-TA

Ensembl Protein ID

BGIOSGA020175-PA

Length

2869

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:26903766..26906634

Sequence Coding Region

26903766..26904068,26904852..26904890,26904993..26905532,26905621..26905719,26906230..26906415
,26906509..26906634

Genome Context

<gbrowseImage1> name=IndicaChromosome05:26903766..26906634 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:26903766..26906634 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGAACCAGCCGGCGGGCGAGGCCCTCGCGGCCAACATCTCCGCCATGTCCCGCCCGGAGATGTACGACCTCATGTCCCAGATGAAGGTGCGCCCCCGCTTCCCCCAACCCTATAGCCCCTCTGCCTCGCTACCTCTGTCTAGGTTTCGCTCGGATTTTTTTTCTCACCGATTTAGCGGTCTCTGGTGCGGCGCCGCCGCCGATGATGCTCGTGGGCAGGTCATGATCGACCACGACCAGGAGAGGGTGCGCCGGATGCTCGTCGACAACCCGGACGTCACCCGCGCTCTCTTCCGGGCGCAAGTAGTACTTGGAATGGTGAAAGCTCCTAAAACTGCACAATCTTCAGACAAGGCCCAACCTGCAGCTGTGCAGGCAACACCATCTTCATCAGTTAAACCTACAGTTCAAGATCATGCTAGTTTTCCCCAACCTCAGTTACCTTCCAGTCAGCAGAACATACAACCTTCTGGCCCATTTTCATCTGGTCCGTCTAATCCGGCATCGTCTTTGGACCTCCCAGCTATGTCAGCAAATCCACAACAATCAGCACAAGCGAAAGGTTATCCTATCCATCAAATGCCTCCCACATCAACAACTCAGACATCCCAGCATCAAAGTGCTACCCTACCTCCTCATGTTTCATCACAGTATTCAAATGTTCCATCACATATGCCAATAGTTCATAGTCAGCCACAGCAACCTTTGCAAAATCCTGGTATGTTTAACCAACAGTTACAACCACCATTGCCCCAGTTGCCTAGGCCTCCCAACATGCAGCCCTTCGTACACCAAATGCATCCGCAAGTACCCAGTTCATTTGGCTTGAGTCATACAAATGCTCCTCAACACATGTTGCAACAATCAATGTTTCATCCTGGTGGGAACCCACAAACTTCCTTCCTTACAGGTCAACCACCACTGCCTAATCAGCCACCGCCATTGCCTAACCAGCCACCACCCCAGCTATACCAGGGTAGTTCACATGCTGCCTCACACTACAATTCTCAAAGTATGCAAATGGATAGATCAACTCCATGGGGGCGTGGTAACGCAGAAGCCTCTTCAGCTGGCACCCATTTCCCTGGGCATTTGCCTGGCTTGCCCGGACAGATGACCCAAGGAATTGGTGGTATCCATTCGGCTCGCCCTGAAGCACCTTTGACGCCTGAGATGGAAAAGATGCTTGTACAGCAAGTCTTGAGCATGTCACCTGACCAGATCAACATGCTGCCTCCAGAACAACGACAGCAAGTGCTTCAGTTACGTGATATGCTACGGCAATGA</cdnaseq>

Protein Sequence

<aaseq>MAANQPAGEALAANISAMSRPEMYDLMSQMKVRPRFPQPYSPSASLPLSRFRSDFFSHRFSGLWCGAAADDARGQVMIDHDQERVRRMLVDNPDVTRALFRAQVVLGMVKAPKTAQSSDKAQPAAVQATPSSSVKPTVQDHASFPQPQLPSSQQNIQPSGPFSSGPSNPASSLDLPAMSANPQQSAQAKGYPIHQMPPTSTTQTSQHQSATLPPHVSSQYSNVPSHMPIVHSQPQQPLQNPGMFNQQLQPPLPQLPRPPNMQPFVHQMHPQVPSSFGLSHTNAPQHMLQQSMFHPGGNPQTSFLTGQPPLPNQPPPLPNQPPPQLYQGSSHAASHYNSQSMQMDRSTPWGRGNAEASSAGTHFPGHLPGLPGQMTQGIGGIHSARPEAPLTPEMEKMLVQQVLSMSPDQINMLPPEQRQQVLQLRDMLRQ</aaseq>

Gene Sequence

<dnaseqindica>1..303#1087..1125#1228..1767#1856..1954#2465..2650#2744..2869#ATGGCGGCGAACCAGCCGGCGGGCGAGGCCCTCGCGGCCAACATCTCCGCCATGTCCCGCCCGGAGATGTACGACCTCATGTCCCAGATGAAGGTGCGCCCCCGCTTCCCCCAACCCTATAGCCCCTCTGCCTCGCTACCTCTGTCTAGGTTTCGCTCGGATTTTTTTTCTCACCGATTTAGCGGTCTCTGGTGCGGCGCCGCCGCCGATGATGCTCGTGGGCAGGTCATGATCGACCACGACCAGGAGAGGGTGCGCCGGATGCTCGTCGACAACCCGGACGTCACCCGCGCTCTCTTCCGGGTGAGATTCCTCGCGTCCTGCGCTTTCAGTTGGTTTTCGTTTATTTATTATCTAGGAGAAAGGTGGATGGGTTGGTGCTTCTCGGGCGCGACCGCTCTCGAAATCTCGAGATTTGTAGGGTTTTGTGAAGTTTCATTCTGGTTATGAAGTGTAAGATTTCGTGTTTGGTTAGTATAGAAAAGAGTAGATTCGTTTCCATAACAAGAGAACCTAGCTCTAGTTTAGTAGTTGGAAATCTCTTAACCGATAAGGGAGAGACTTTTTGCTCATCCAGTTAGGCCAAATTCATGTTGATGTTGGCATCGAGAGATAATGATGGACTTTATGCAGCAAAAACTGTGTTGGCTGCTCTTTGCATGATGAGTTCAGTATTCTAATTAGCACATGGGATTCTAGTGTATTAATGTTGGTAACATGCTATGTTTCTCTTCTTAGTTTTATCATAATATGTTCACCAAGTCCCTGCTGTTTCGATGTGAAATGACCGGATGAATAAGAATGTCTACTGCATAGTTCAGTATTTTTCTTTTGTTTAGCAAATCATCTGCATTTGAATCGACGGCTTCTTGTATAATATTTAACTATAGTTTCCCAGAAGCTTGTTTCATAACATCCCATTTTCTCATATACACGTTTGTGTTCCAGTTGATCAATATAAATTGTTTGGTGTGGTGTTAACAACCTATGTGTATGCTACATTCAACTGCATTCTCTTGCTCAATCAGTAAATTACGAATATGCATTCATGCAAAATATTTTCCTTATATGCCTTTCTTCTTGCAGGCGCAAGTAGTACTTGGAATGGTGAAAGCTCCTAAAACTGTATGTAACTTGAGTTATTCAAGTTTTCTTTACATTTAGCGTTTGAATTGCTAATAATAAACTGAAATTTATCATCATCATCAAGTTCTTGCTGTATCGCAGGCACAATCTTCAGACAAGGCCCAACCTGCAGCTGTGCAGGCAACACCATCTTCATCAGTTAAACCTACAGTTCAAGATCATGCTAGTTTTCCCCAACCTCAGTTACCTTCCAGTCAGCAGAACATACAACCTTCTGGCCCATTTTCATCTGGTCCGTCTAATCCGGCATCGTCTTTGGACCTCCCAGCTATGTCAGCAAATCCACAACAATCAGCACAAGCGAAAGGTTATCCTATCCATCAAATGCCTCCCACATCAACAACTCAGACATCCCAGCATCAAAGTGCTACCCTACCTCCTCATGTTTCATCACAGTATTCAAATGTTCCATCACATATGCCAATAGTTCATAGTCAGCCACAGCAACCTTTGCAAAATCCTGGTATGTTTAACCAACAGTTACAACCACCATTGCCCCAGTTGCCTAGGCCTCCCAACATGCAGCCCTTCGTACACCAAATGCATCCGCAAGTACCCAGTTCATTTGGCTTGAGTCATACAAATGCTCCTCAACACATGTTGCAACAATCAATGTTTCATGTAAGATTCTGGACCAAATCTTAATTTCCTGATAACTTGAAGATATGATCTGCAAACTGACCACCAAAACATATTTGGAATTTCTCAGCCTGGTGGGAACCCACAAACTTCCTTCCTTACAGGTCAACCACCACTGCCTAATCAGCCACCGCCATTGCCTAACCAGCCACCACCCCAGCTATACCAGGTACAGTTTCTTGTCTACTAATAGAAGATATGGTCAGTGTTAATATTTTGTTATCTTCCCTTGCGCATTAAAGTTGATGTGTTTGCTCAACATTTGCTATTCAAGGTTGGATGTATGAACTACATTGATGAAGAAAAATGTGTTGTTTATTTGTTATTATCAGATCACAAGAGTTTTAGCTCTTGAAGTATCATGCAGATATAAGTATTGTGTCCAATGTTTAGTACCTACTGCTATGATGGTGTGGTTATTTGATGACTGACAGTGGGATCTTTTATCTATGGAGCACTGACCTGTGATCTACACTACTCTTTAGTTATATGAATGATATTTCTTATCTTTCATCCTATAAAGATGTACTGTTTGCATACAAGAGGCCTATATAAAATGTTTGGTAACATTATCATCTACATCTGCTACTTGGACAGCTTTACTGTTGCACTCTTGATGTGATGTGATCATCATATGCTTAGGGGTAAAATAACTCGTGCAATCTTTGTGTTTTAACAGGGTAGTTCACATGCTGCCTCACACTACAATTCTCAAAGTATGCAAATGGATAGATCAACTCCATGGGGGCGTGGTAACGCAGAAGCCTCTTCAGCTGGCACCCATTTCCCTGGGCATTTGCCTGGCTTGCCCGGACAGATGACCCAAGGAATTGGTGGTATCCATTCGGCTCGCCCTGAAGCACCTGTAAGTGCCTGTTGTTAACTATTGGAGTTGTCTATGTTGTGTTTTCTCCCTTTCCCATAGAATGAACTATTCACATGTTTGTCTTTCAATCAGTTGACGCCTGAGATGGAAAAGATGCTTGTACAGCAAGTCTTGAGCATGTCACCTGACCAGATCAACATGCTGCCTCCAGAACAACGACAGCAAGTGCTTCAGTTACGTGATATGCTACGGCAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020175