BGIOSGA020221

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Revision as of 03:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020221| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020221, complete gene.| tag = OsI_206...")
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Gene Name

BGIOSGA020221

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020221, complete gene.

LocusTag

OsI_20681

Ensembl Transcript ID

BGIOSGA020221-TA

Ensembl Protein ID

BGIOSGA020221-PA

Length

6664

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27500578..27507241

Sequence Coding Region

27500578..27500665,27500782..27501334,27502161..27502654,27502902..27503040,27503609..27503680
,27503769..27503840,27504102..27504239,27505300..27505380,27505483..27505643
,27505703..27505992,27506094..27506220,27506291..27506359,27506465..27506657
,27506749..27507073,27507167..27507241

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27500578..27507241 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27500578..27507241 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCACGGTCGTCGTTGTTTCTTCTCTGCCTCGCCACCGCCACCGCCGGCGTACTCCAAGCTCGTGCCCAGCCTGACAGCAAAGGTTTCATCAGCGTAGACTGCGGGCTCCCGGGGAAGACGAGCTACATTGACGACAAGACCAAGATATCCTACGCCTCGGACGACGGATTCACCGACGGCGGCAAGCACTACAACGTCTCGCCGGAGTACATCAAGCCGGCGGTCACGGCGCGCTACTACAACGTGCGCAGCTTCCCCGACGGCGCGCGCAACTGCTACACGCTCCGGTCGCTCGTGGCCGGCCTCAAGTACCTCATCCGCGCCACCTTCATGTACGGCAACTACGACGGCCTCAACAAGCTGCCCGTGTCGTTTGACCTCCACATCGGCGTCAACTTCTGGACGGTGGTGAACATCACGGACCCGATCCAGCCGGTGAACCGGGAGGCCATCGTCGTCGTGCCCGACGACTCCGTGCAAGTCTGCCTGGTGAACACCGGCGCCGGGACACCGTTCATCTCCGGGTTGGACCTCAGGCCTCTTATGAACAAGCTCTACCCGCAGGTGAACGCCACTCAGGGCCTACTCCAACTCGCCAGGCTCAACTTCGGCCCATCTGACGAAACCTCCATCAGGTATCCGGATGATCCGCACGACAGAGTATGGTTTCCTTGGTTTGATGCGGCCAAGTGGAACGAGATATCAACGACAAACAGGGTTCAGAACATAGACAACGACCTGTTCGAGGCGCCGACGGCGGTGATGCAGACAGCGGTCACGCCAATCAACGCCTCCAACAACATCGACTTCTTCTGGAACTCACAGCCGCAGCCCAACGACCCAGCGCCAGGGTACATCGCCATCTTTCACTTCTCCGAGCTTGAGAACCTTCCCAACAACGCCTCACGGCAATTCTATATCAACATCAACGGCATATTGTTCGACGATGGTTTCACACCATCGTTTCTCTACGCCGAGGCCTCCTACAGCTCCAAACCCTTTGTGCGACACCCGCAGTACAACATCACCATTAACGCCACCGCCAACTCGACGATGCCGCCGCTCATCAACGCCGTCGAGGTGTACTCTGTCATCTCCACCGCTAACATTGGCACCGACTCACAAGATGTATCAGCAATCATGACGATCAAGGCGAAGTACCAGGTGAAAAAGAATTGGATGGGTGACCCGTGCCTCCCTAGAAATCTTGCGTGGGATAATTTGACCTGCAGCTATGCCATTTCTAACCCTGCAAGAATCACGAGCTTAAACCTGTCAAAAATTGGTTTGAGTGGTGAGATATCGTCCTCTTTTGGGAATCTCAAGGCCATCCAATATTTGGATCTATCAAACAACAACTTGACAGGCTCGATTCCAAATGCCCTTTCACAGTTGTCTTCATTGACAATCTTCACTGGTGGTGAGGACGACGACGGGTGGCTGATGGTGGACAACAACGATGGCGCAGCTGGTGGTAGACAACGACAGCGATGGCGGACGGTTGAAGGCGCGGCGCGCGCGGTTGAGGGCCGAAGGAGAGGGGAGCAGCGAGATTTGACAGGAAACCAACTAAATGGAACAATTCCGCCTGGACTTCTCAAGAGAATTCAGGATGGCTTTTTAAATCTAAGATATGGAAATAACCCAAATATTTGCACCAATGGCAACTCATGTCAACCACCAAAAAACAAGAGCAAGCTAGCTATCTACATTGTTGTTCCTATAGTTCTGGTCCTCGCGATAGTATCAGTGATGACACTACTCTATTGCCTACTGAGAAGAAAAAAACAAGTTCCATTCTTCACGTACAAAGGATCAATGAACAATTCTGTAAAGCCACAAAACGAGACAATGAGATATGGGCCAACAAATAATGGCTCCAGGCATAATTCATCACTGCGGCTTGAGAACCGCCGGTTTACATATAATGAACTGGAGAAGATAACGAACAAATTCCAGCGAGTTCTTGGACAAGGAGGCTTTGGAAAAGTCTATGATGGCTTCTTGGAGGATGGCACTGAAGTGGCAGTCAAAGTGAGGACTGAATCTTCCAACCAAGGTGATAAGGAGTTTCTTGTTGAGGCTCAAATTTTAACCCGGATTCATCACAAGAACCTTGTCTCTATGATCGGCTATTGTAAGGATGAGAAATATATGGCACTTGTGTATGAGTACATGTCAGAAGGAACCCTTCAAGAACACATTGCAGGAAAAGGAAATGATGGGAGATACTTAACCTGGAAAGAGAGGCTTCGAATTGCGCTGGAATCTGCTCAAGGGCTAGAGTACCTACACAAAGGGTGCAACCCTCCTCTTATTCACCGTGATGTGAAGGGAACCAACATTTTGTTGAACACGAGGCTAGAGGCCAAGATTGCTGATTTTGGTTTGTCCAAGGTTTTCAATCCTGAGAACGGCACCCATGTATCTACGAACAAACTTGTTGGCACACCTGGATATGTGGATCCAGAGTACCAATCAACAATGCAACCAACGACTAAGAGTGATGTCTATAGCTTTGGTGTTGTCCTGTTGGAGTTGGTAACAGGGAAGCCAGCTATCTTGCGTGATCCAGAGCCCATCAGCATCATCCATTGGGCACAACAACGCTTAGCACGGGGTAACATTGAGGGTGTGGTGGATGCAAGCATGCATGGTGACTACGATGTGAATGGCCTATGGAAGGTTGCAGACATTGCACGCAAGTGTACGGCGCTTTCGTCAGCACACCGCCCCACTATGACCGACGTGGTGGCACAGTTGCAAGAGTGTCTCGAGCTAGAGGATAAGCACCAGAACAACTCTACATTAGAGATGGAGCAAAATTTTGGAAGGATACCATCAATCACTGGCGGTCCTGCTGCACGATAA</cdnaseq>

Protein Sequence

<aaseq>MAARSSLFLLCLATATAGVLQARAQPDSKGFISVDCGLPGKTSYIDDKTKISYASDDGFTDGGKHYNVSPEYIKPAVTARYYNVRSFPDGARNCYTLRSLVAGLKYLIRATFMYGNYDGLNKLPVSFDLHIGVNFWTVVNITDPIQPVNREAIVVVPDDSVQVCLVNTGAGTPFISGLDLRPLMNKLYPQVNATQGLLQLARLNFGPSDETSIRYPDDPHDRVWFPWFDAAKWNEISTTNRVQNIDNDLFEAPTAVMQTAVTPINASNNIDFFWNSQPQPNDPAPGYIAIFHFSELENLPNNASRQFYININGILFDDGFTPSFLYAEASYSSKPFVRHPQYNITINATANSTMPPLINAVEVYSVISTANIGTDSQDVSAIMTIKAKYQVKKNWMGDPCLPRNLAWDNLTCSYAISNPARITSLNLSKIGLSGEISSSFGNLKAIQYLDLSNNNLTGSIPNALSQLSSLTIFTGGEDDDGWLMVDNNDGAAGGRQRQRWRTVEGAARAVEGRRRGEQRDLTGNQLNGTIPPGLLKRIQDGFLNLRYGNNPNICTNGNSCQPPKNKSKLAIYIVVPIVLVLAIVSVMTLLYCLLRRKKQVPFFTYKGSMNNSVKPQNETMRYGPTNNGSRHNSSLRLENRRFTYNELEKITNKFQRVLGQGGFGKVYDGFLEDGTEVAVKVRTESSNQGDKEFLVEAQILTRIHHKNLVSMIGYCKDEKYMALVYEYMSEGTLQEHIAGKGNDGRYLTWKERLRIALESAQGLEYLHKGCNPPLIHRDVKGTNILLNTRLEAKIADFGLSKVFNPENGTHVSTNKLVGTPGYVDPEYQSTMQPTTKSDVYSFGVVLLELVTGKPAILRDPEPISIIHWAQQRLARGNIEGVVDASMHGDYDVNGLWKVADIARKCTALSSAHRPTMTDVVAQLQECLELEDKHQNNSTLEMEQNFGRIPSITGGPAAR</aaseq>

Gene Sequence

<dnaseqindica>1..88#205..757#1584..2077#2325..2463#3032..3103#3192..3263#3525..3662#4723..4803#4906..5066#5126..5415#5517..5643#5714..5782#5888..6080#6172..6496#6590..6664#ATGGCGGCACGGTCGTCGTTGTTTCTTCTCTGCCTCGCCACCGCCACCGCCGGCGTACTCCAAGCTCGTGCCCAGCCTGACAGCAAAGGTACGTAGTACAATCCTAGTATCCTACCTCATAGTAATGCGCGCAATGCTTCACAAATCAAAAAGACATCAATGTTCAATGAACTAAAAGAGCATATGTTTTTCATGCTTTTGCAGGTTTCATCAGCGTAGACTGCGGGCTCCCGGGGAAGACGAGCTACATTGACGACAAGACCAAGATATCCTACGCCTCGGACGACGGATTCACCGACGGCGGCAAGCACTACAACGTCTCGCCGGAGTACATCAAGCCGGCGGTCACGGCGCGCTACTACAACGTGCGCAGCTTCCCCGACGGCGCGCGCAACTGCTACACGCTCCGGTCGCTCGTGGCCGGCCTCAAGTACCTCATCCGCGCCACCTTCATGTACGGCAACTACGACGGCCTCAACAAGCTGCCCGTGTCGTTTGACCTCCACATCGGCGTCAACTTCTGGACGGTGGTGAACATCACGGACCCGATCCAGCCGGTGAACCGGGAGGCCATCGTCGTCGTGCCCGACGACTCCGTGCAAGTCTGCCTGGTGAACACCGGCGCCGGGACACCGTTCATCTCCGGGTTGGACCTCAGGCCTCTTATGAACAAGCTCTACCCGCAGGTGAACGCCACTCAGGGCCTACTCCAACTCGCCAGGCTCAACTTCGGCCCATCTGACGAAACCTCCATCAGGTGAGCTAAGTTAAAGTTTCCTACGCGTATAGACTGTTTATATTTATTATCATATCATTTATTTATACTATCATCAGTATTACCGGTGATAATTCAAACTCGATAAATTTTAACTAAAAGTTAGTCTCACAATATAGGGTAATTTTACTATTCTTAAAAAGTTATCGAAAGGTATCATATTTTTTAGTGTAAAATTTGGTACCTCCAAGTACTAAATATTTTGAGGTATCAAAATTATTGGTGTAAAATCTTGGTATCTTTAGGCACTTTATCAAATATCATAAAATTTTCCACAATATATAGGTTTAGTGATATAAATAGCGTAATATTAGATTCGTATTTACAGATATTTTCATATACTTTTTCTGATTACCAACATGCAAAACGAGGGGATATCTCTTAAAGGATGAAATCACTTTTCCCGATAAGAGCTAGATATTTAGCTAAGAGCAGGTACAATAGCAGGCTATAAGCCAGCTGCAAACATATTTTAAGGAAATAAATGAGGAGAGAGAAGGGAAGCGGGCTACAGATTTATAGTCAGCTATAGCATGGACTCCAATACACAGTGTATATGACAGGTGGGTCCAGGTACTAATAGTGTAGTATGTAACTATTGTATGAATAAGCTATTAGATTGGCTATAGATGAATTGGAGCTAATAGTTGGCTATACTATTAAACTTGCTCTAATTCTCTGTAGATAAATTTTACGGTTTTTGAGAAAGTACTAATTTTTAAATTAGAAAATATGATATCTTCTAATATTTTTTTTAAGGATGGTAAAATTATCTGTAGGAAATGCAACTGATCGATTCAATGGCCAGGTATCCGGATGATCCGCACGACAGAGTATGGTTTCCTTGGTTTGATGCGGCCAAGTGGAACGAGATATCAACGACAAACAGGGTTCAGAACATAGACAACGACCTGTTCGAGGCGCCGACGGCGGTGATGCAGACAGCGGTCACGCCAATCAACGCCTCCAACAACATCGACTTCTTCTGGAACTCACAGCCGCAGCCCAACGACCCAGCGCCAGGGTACATCGCCATCTTTCACTTCTCCGAGCTTGAGAACCTTCCCAACAACGCCTCACGGCAATTCTATATCAACATCAACGGCATATTGTTCGACGATGGTTTCACACCATCGTTTCTCTACGCCGAGGCCTCCTACAGCTCCAAACCCTTTGTGCGACACCCGCAGTACAACATCACCATTAACGCCACCGCCAACTCGACGATGCCGCCGCTCATCAACGCCGTCGAGGTGTACTCTGTCATCTCCACCGCTAACATTGGCACCGACTCACAAGATGGTATGTGCTCAGGGTTTTCAATTTCGATTTCATCTAAAATTTCAGCCATTTCAGTAGAATTAAAATTTTTAAAATTTTGAAAATTTCAGAAATTTTTGGACCGAAATTTTCTGAAATTTTGACACAATTTAACAGAATTTGACTAAATTCATAAAAAATTTGAGAAAAACTGAAATATGCACATACATGAGCTAGCTGATGGTCAAGCATGTCATGTGCATTGATGAAATTTTTTGGTGATTGACAGTATCAGCAATCATGACGATCAAGGCGAAGTACCAGGTGAAAAAGAATTGGATGGGTGACCCGTGCCTCCCTAGAAATCTTGCGTGGGATAATTTGACCTGCAGCTATGCCATTTCTAACCCTGCAAGAATCACGAGCTTGTAAGTAATAATTCATTCCATTAGCCAAAAACAACATGACTATTGTGATGAAAAAACAAAACTATTACCTCCATCCCAAATAAAAAGGGTGCAAACGTGTATGGCTATTGTTAAACTATTGTAAATATGAAAATTTTAATTGTATACACAATGCATAGTTAATGGCTTAGATTAAAATAATTAAAGAGAACCCATCAATTATAACATGCTAATTATTAATTTAAAGTTCAAAATTAAATTAATAAAAGAGATGATATACTTGTTGCTTGTGAATTTAGAAATTACTAAGTTTTAGGATACTAATGAAACTAAAGAGGCCATGCATGGCAGTAAAAATTAATTAAGACCCCATGTTATTTCCAATAGAATTTTTTATTTGATATGAAATTTTAATACAATCTATGGTGGTCGATACCACCATCAATCACCAGCCTGATCTTTTTTATTATTATTATTAGCACCCTCAGAATGCCAAATCAGCACATGCATAAATAGCAAGAGGAAATTAAATCTAATGGGAGCTAATTAACTGTGCAATGAAATTGGGCTGATCATATTCTCTTTGCAGAAACCTGTCAAAAATTGGTTTGAGTGGTGAGATATCGTCCTCTTTTGGGAATCTCAAGGCCATCCAATATTTGTATGTTATGAGTTCATGATGTCGGATGTATTAACTTGTTTGCGTAATCTGAGTTAAAATTTGGAAAATCTTGCTCCATATCTTGCAGGGATCTATCAAACAACAACTTGACAGGCTCGATTCCAAATGCCCTTTCACAGTTGTCTTCATTGACAATCTTGTAAGTTTGGCAATTCTTTTATCAACTTTTACCTAGAGTAAAGTACACGGTCGGTCCTTAAAGTTGGAGCGAGGTGTCACTTAGGTCCATGATCTTGAAAAATCGACATTAGGATCCACGGTCTTGTTTAAGTGACTCATTGAGGTCCAAAGGATCTCTGACCGGGTTGACTAGCTTATGTGGCCATCCAGAGTGGCAACATATTTTCATGTGAGCTCCTCCACATCCGATCCAACCCTTCTTCCCCAAATCTTCTTTCAGCACTGGTGGTGAGGACGACGACGGGTGGCTGATGGTGGACAACAACGATGGCGCAGCTGGTGGTAGACAACGACAGCGATGGCGGACGGTTGAAGGCGCGGCGCGCGCGGTTGAGGGCCGAAGGAGAGGGGAGCAGCGGTAAGGGCAGAGGGCGTCAAGCTCCGGCAGCTGAGCTCTATACAAGCTTGAGGCCACGGTGGTGGAGGTTGGACCGGCGACGACTCGGGGTATGGTGGCGGCAGCGGCTGAGCTCAGGGACGACACGAGCGAGCTCGCCGGAGGTCACCCTCGTGCTGCTACTTCGTGTCGTCCACGCACATCTAGCCGGGAGACAACGAGGGGATGACGAGTGGTGGCGATTGACGCGGAGCAGGAAGCAGCAACACATCAAGGGCCAGGAGACAACGAGGGGACGTCGAGAGACGGCGGCTTGCAGCCGTAGGGATCTGGCCGCAGCTGGGACGGGATCCACCGGTGTGCACGCCGCCGCCTAGCGCAGTGATGTCCACGGCCTTAGTGCGGCCGTCGTCGCTAGATCCGATGGATAACTCGATGACATCACCGTCATTGAGGCTCTGATAGTTGTCGAACTTGAGGGAGGACCGGTGGACGAAGAGGTCCTCGCCGCCATTGTCGGGAGTGATGAAGCCGAACCCATTGGTGGCGTCGAACCCCTTCATCGTCCCCTCACCCTCTCCGACACCACCTCGCCCTCGCCGCCCCAAGTCGAACCCTCTAAAACCCTAAAAGCTGCCCGCCGTCTCGCTCCACTGGCCAGCCGCCGCCACCGCCCTACTCGCCCTTCTCCCTCTTTGCGCATGCTCGCCAACTCGTCGCCGTACCTGTCTCCCTCCTCGTCGTCACTGCCGCCGCCAGCCCCTGCAACCGCAAACCATAGAAATCACACTGAAAGAAGATATGGGGAAGAAGGGTTGGATCGGATGCGGGGGAGGGGGGCGAAATGCAAATATACTACTACTCTGGACGGTCACGTAAGCCAGTCAACCTGGTCAGAGGTCCTTTGGACCTCAATGAGTCACTTAAACAAGATCGCGGACCCTAATATCGATTTTTCAAGATCATGGACCTAAGTAACACCTCGCTTCAACTTTAAGGACCGATCATGTACTTTACTCTTTTACCTACGTACTCTTTAGAATCCTTTTGAACTAATATCCTACTGTATGTCTTCTTTTAGAGATTTGACAGGAAACCAACTAAATGGAACAATTCCGCCTGGACTTCTCAAGAGAATTCAGGATGGCTTTTTAAATCTAAGGTAATGACACCACATTCTTCTTATAGCAGTCTTCTTCAGCAAAAGGTGCAGATCAATTTTTCAGAAAATGGACATAAACATATTTATGTCATTAATATATAGATATGGAAATAACCCAAATATTTGCACCAATGGCAACTCATGTCAACCACCAAAAAACAAGAGCAAGCTAGCTATCTACATTGTTGTTCCTATAGTTCTGGTCCTCGCGATAGTATCAGTGATGACACTACTCTATTGCCTACTGAGAAGAAAAAAACAAGGTGGGTCTTGCTATCATTTGTCTGCTCTACTTCATCTTCTTGAATACTACTGATGCTAGTTCCATTCTTCACGTACAAAGGATCAATGAACAATTCTGTAAAGCCACAAAACGAGACAATGAGATATGGGCCAACAAATAATGGCTCCAGGCATAATTCATCACTGCGGCTTGAGAACCGCCGGTTTACATATAATGAACTGGAGAAGATAACGAACAAATTCCAGCGAGTTCTTGGACAAGGAGGCTTTGGAAAAGTCTATGATGGCTTCTTGGAGGATGGCACTGAAGTGGCAGTCAAAGTGAGGACTGAATCTTCCAACCAAGGTGATAAGGAGTTTCTTGTTGAGGTAGAATTTTTTAAGCTGCACTTTTTCTTGCTATGTAAAAATTTCTATCAAGAAAAGTCTCCATGGGGGCATCATTAAATAGACAAGTTTCACCACTTTAGGCTCAAATTTTAACCCGGATTCATCACAAGAACCTTGTCTCTATGATCGGCTATTGTAAGGATGAGAAATATATGGCACTTGTGTATGAGTACATGTCAGAAGGAACCCTTCAAGAACACATTGCAGGTCCGAACTAACTTCATCTACCAGCTTATTTTTTTAGTCCTTTCATGATCTCCAATTCTTATATTTGCAGGAAAAGGAAATGATGGGAGATACTTAACCTGGAAAGAGAGGCTTCGAATTGCGCTGGAATCTGCTCAAGGTAACTACTTAGAATTTCTAATGCTATTTTTAGTTTGATTTTACATTTTTTTCTCTCTCTAGAAGCTTGATCAGTATTTCAATTACATGGTGAATTAATGATCAGGGCTAGAGTACCTACACAAAGGGTGCAACCCTCCTCTTATTCACCGTGATGTGAAGGGAACCAACATTTTGTTGAACACGAGGCTAGAGGCCAAGATTGCTGATTTTGGTTTGTCCAAGGTTTTCAATCCTGAGAACGGCACCCATGTATCTACGAACAAACTTGTTGGCACACCTGGATATGTGGATCCAGAGTATGTTGTCTTTCTTGAAGCCCCTTTTTTAAAGTTCTTTTGTTAGAGAAATACTAATTGTAAGACTTATTGGGACTGACCAAATGCGTAGGTACCAATCAACAATGCAACCAACGACTAAGAGTGATGTCTATAGCTTTGGTGTTGTCCTGTTGGAGTTGGTAACAGGGAAGCCAGCTATCTTGCGTGATCCAGAGCCCATCAGCATCATCCATTGGGCACAACAACGCTTAGCACGGGGTAACATTGAGGGTGTGGTGGATGCAAGCATGCATGGTGACTACGATGTGAATGGCCTATGGAAGGTTGCAGACATTGCACGCAAGTGTACGGCGCTTTCGTCAGCACACCGCCCCACTATGACCGACGTGGTGGCACAGTTGCAAGAGTGTCTCGAGCTAGAGGATAAGCACCAGGTCAGTGATATAAACAATGGCTTTTATAATGGCAATAGTGGCGATCTAAACTCTAACTTCTACACCACTTAACAATCCACTGGTTTGCGTCAGAACAACTCTACATTAGAGATGGAGCAAAATTTTGGAAGGATACCATCAATCACTGGCGGTCCTGCTGCACGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020221

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