BGIOSGA020224

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Revision as of 03:05, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020224| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020224, complete gene.| tag = OsI_206...")
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Gene Name

BGIOSGA020224

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020224, complete gene.

LocusTag

OsI_20684

Ensembl Transcript ID

BGIOSGA020224-TA

Ensembl Protein ID

BGIOSGA020224-PA

Length

4199

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27523640..27527838

Sequence Coding Region

27523640..27523730,27523840..27524392,27524560..27525056,27525154..27525292,27525516..27525587
,27525668..27525739,27526023..27526186,27526279..27526547,27526636..27526762
,27526883..27526951,27527049..27527241,27527337..27527838

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27523640..27527838 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27523640..27527838 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCATGGTCGTGGTTAATTCTACTATGCCTCGTCGCCGCCGCCACCGCCGGCGTGCTCCAAGCTCGTGCCCAGCCTGATAGCAAAGGTTTCATTAGCGTAGACTGCGGCCTCCCGGGGAAGACGAGCTACGTGGACGACAAGACCAAGATATCCTACGCGGCGGACGACGGCTTCACCGACGGCGGCTCGTTCCACAACATCTCGGCGGAGTACATCACGCCGGCGCTCTCGGCGCGCTACCACAACGTGCGCAGCTTCCCCGACGGCGCGCGCAACTGCTACACGCTCCGGTCGCTCGTGGCCGGCCTCAAGTACCTCATCCGCGCCACCTTCATGTACGGCAACTACGACGGCCTCAGCAAGCTGCCAATCTTCGACGTCTACATCGGCGTCAACTTCTGGATGATGGTCAACATCTCGGACCCCTCCGGCGCGACGCTCCTGGAGGCCATCGTCGTCGTGCCGGACGACTTCGTGCAGGTTTGCCTCGTGAACACCGGCACCGGGACACCGTTCATCTCCGGGCTGGACCTCAGGCCTCTCGAGAAGAAGCTCTACCCGCAGGCGAACGACAAGCGGGGCCTGTCCTTGTTCGGCAGATGGAACTTTGGCCCAATTAGTACTACCGAGTTCATCAGGTACCCCGACGATCCACACGACAGAATATGGATGCCTTGGGTCTCGCCATCATATTGGGTCGAGGTATCGACGACGAGGCCGGTGCAGCACACGGACGAGGACGTATTCGACGCGCCGACGAAGGTGATGCAGACGGCGATTGCGCCGCTCAACGCCTCGAGCAACATCGAGTTCGCCTGGGTACCCTACACGCAGCCCAAGGACCCGGCGCCGGGGTACATCACCGTCATGCACTTCTCCGAGCTGCAGCTCCGCTCCAGCAACGCCACGCGCCAGTTCTACATCAACCTCAACGGCAACATGGTGTTTAGCCAGGGCTACACGCCGGCGTACCTCTACGCCGACGCCATCTTCAACAGCAACCCGTTCCTACGATACCCGCAGTACAACATCTCCATCAACGCCACCGCCAACTCGACGCTGCCACCGATCATCAACGCCATCGAGGTGTTCTCCGTCTTCTCCACCGCCACCGTTGGCACAGATGGTCAGGATGCTTCCGCCATGATGGTGATCAAGGAAAAGTATCAGGTGAAGAAGAACTGGATGGGTGATCCGTGCGTTCCAAAGACGCTTGCGTGGGATAAGTTGACATGCAGCTATGACAGCTCCAAACCTGCAAGAATCACAGACATAAATCTGTCATCCGGTGGTTTAAGTGGTGAGATATCGTCCGCTTTTGCGAATCTCAAGGCTCTTCAAAACTTGGATCTGTCAAACAACAATTTGACAGGTTCGATTCCAGATGCACTTTCACAGTTGCCTTCGTTGGCAGTATTATACGGAAATAACCCAAACCTCTGCACCAACGACAATTCATGTCAGCCAGAAAAACACAAGAGCAAGCTTGCCATCTATGTAGCTGTTCCTGTAGTTCTGGTTTTGGTGATAGTATCAGTCACAATACTGCTCTTTTGCCTTCTGGGACGAAAAAAGAAGCAAGGATCAATGAACACTTCCGTAAAGCCGCAGAATGAGACAACGAGCTATGTGCCGACAAATGGCAGCCATGGGCATGGCTCATCAATGCAGCTTGAGAACCGACGGTTTACTTACAATGATTTAGAGAAGATAACAAACAACTTTCAGCGAGTGCTCGGCGAAGGAGGGTTTGGGAAGGTCTACGATGGCTTCTTGGAAGATGGCACTCAAGTGGCAGTCAAATTAAGGTCTGAATCTTCCAACCAAGGGGATAAGGAATTTCTCGCAGAGGCTCAGATTTTAACTCGGATTCACCACAAGAGCCTTGTATCTATGATCGGTTATTGCAAGGATGGGAAATACATGGCACTTGTCTATGAGTACATGTCAGAAGGAACCCTTCGAGAACATATTTCAGGTAAAAGAAACAACGGGAGATACTTAACCTGGAGAGAGAGGCTTCGAATCGCGCTGGAATCCGCTCAAGGGCTAGAGTACCTACACAAGTGGTGCAATCCACCTCTTATTCACAGAGATGTGAAGGCTACCAACATTCTATTGAATGCGAGGCTAGAGGCTAAGATTGCTGATTTTGGCTTATCCAAGACGTTCAATCTTGAGAATGGCACACATGTATCTACGAACACGCTTGTTGGCACACCTGGATACGTGGATCCAGAGTACCAGGCAACAATGCAACCAACGACCAAGAGTGACGTCTATAGCTTTGGTGTTGTTCTATTGGAGCTGGTCACAGGGAAGCCGGCTGTCCTACGTGATCCAGAGCCCATAAGTATCATTCATTGGGCGCAACAGCGCCTAGCACAGGGTAATATTGAGGGAGTGGTGGATGCACGTATGCATGGTGACCATGATGTAAATGGTGTATGGAAGGCTACGGACATCGCACTCAAGTGTACCACACAAGTATCGGCACAACGGCCCACTATGACCGATGTGGTGGCACAACTGCAAGAGTGCCTCGAGCTCGAGGAGGGGCGTTGTGCCATCAGCAATGCGAACAACAATTTCTATACCGACAATAACAGCAACTCTAACTCAAGTTATGACATGTATGCCACTGACCACTCTATTGATGTAAGTCAGAACAGCGCTGCATTTGAGACGGAGCGTAATTTTGGAAGGATGCCATCAACGGCCACCGGTCCAGCTGCACGATAA</cdnaseq>

Protein Sequence

<aaseq>MAAWSWLILLCLVAAATAGVLQARAQPDSKGFISVDCGLPGKTSYVDDKTKISYAADDGFTDGGSFHNISAEYITPALSARYHNVRSFPDGARNCYTLRSLVAGLKYLIRATFMYGNYDGLSKLPIFDVYIGVNFWMMVNISDPSGATLLEAIVVVPDDFVQVCLVNTGTGTPFISGLDLRPLEKKLYPQANDKRGLSLFGRWNFGPISTTEFIRYPDDPHDRIWMPWVSPSYWVEVSTTRPVQHTDEDVFDAPTKVMQTAIAPLNASSNIEFAWVPYTQPKDPAPGYITVMHFSELQLRSSNATRQFYINLNGNMVFSQGYTPAYLYADAIFNSNPFLRYPQYNISINATANSTLPPIINAIEVFSVFSTATVGTDGQDASAMMVIKEKYQVKKNWMGDPCVPKTLAWDKLTCSYDSSKPARITDINLSSGGLSGEISSAFANLKALQNLDLSNNNLTGSIPDALSQLPSLAVLYGNNPNLCTNDNSCQPEKHKSKLAIYVAVPVVLVLVIVSVTILLFCLLGRKKKQGSMNTSVKPQNETTSYVPTNGSHGHGSSMQLENRRFTYNDLEKITNNFQRVLGEGGFGKVYDGFLEDGTQVAVKLRSESSNQGDKEFLAEAQILTRIHHKSLVSMIGYCKDGKYMALVYEYMSEGTLREHISGKRNNGRYLTWRERLRIALESAQGLEYLHKWCNPPLIHRDVKATNILLNARLEAKIADFGLSKTFNLENGTHVSTNTLVGTPGYVDPEYQATMQPTTKSDVYSFGVVLLELVTGKPAVLRDPEPISIIHWAQQRLAQGNIEGVVDARMHGDHDVNGVWKATDIALKCTTQVSAQRPTMTDVVAQLQECLELEEGRCAISNANNNFYTDNNSNSNSSYDMYATDHSIDVSQNSAAFETERNFGRMPSTATGPAAR</aaseq>

Gene Sequence

<dnaseqindica>1..91#201..753#921..1417#1515..1653#1877..1948#2029..2100#2384..2547#2640..2908#2997..3123#3244..3312#3410..3602#3698..4199#ATGGCGGCATGGTCGTGGTTAATTCTACTATGCCTCGTCGCCGCCGCCACCGCCGGCGTGCTCCAAGCTCGTGCCCAGCCTGATAGCAAAGGTACAAACACAAATTTTCATCGGGCATTAAGTAGCGCTTCACAGTGAAATCAATATGCACAAGCTATCATACTTTCGCAGTTGCTAATTAAATGTAAAGTGAGCTCCAGGTTTCATTAGCGTAGACTGCGGCCTCCCGGGGAAGACGAGCTACGTGGACGACAAGACCAAGATATCCTACGCGGCGGACGACGGCTTCACCGACGGCGGCTCGTTCCACAACATCTCGGCGGAGTACATCACGCCGGCGCTCTCGGCGCGCTACCACAACGTGCGCAGCTTCCCCGACGGCGCGCGCAACTGCTACACGCTCCGGTCGCTCGTGGCCGGCCTCAAGTACCTCATCCGCGCCACCTTCATGTACGGCAACTACGACGGCCTCAGCAAGCTGCCAATCTTCGACGTCTACATCGGCGTCAACTTCTGGATGATGGTCAACATCTCGGACCCCTCCGGCGCGACGCTCCTGGAGGCCATCGTCGTCGTGCCGGACGACTTCGTGCAGGTTTGCCTCGTGAACACCGGCACCGGGACACCGTTCATCTCCGGGCTGGACCTCAGGCCTCTCGAGAAGAAGCTCTACCCGCAGGCGAACGACAAGCGGGGCCTGTCCTTGTTCGGCAGATGGAACTTTGGCCCAATTAGTACTACCGAGTTCATCAGGTGAGTAATTAAAAGATTCATCCAAGTTTTTTTCTAGATAATAGAAATGGTTTACATCTTTGATCTTTACCATTGGGCACACACAGTTGAAAAAGAAAGATGATAAATAGTCAATCCAAGAGGGTACAATGAATTGATCAAACGGAACACAACCGATTAATGGCCAGGTACCCCGACGATCCACACGACAGAATATGGATGCCTTGGGTCTCGCCATCATATTGGGTCGAGGTATCGACGACGAGGCCGGTGCAGCACACGGACGAGGACGTATTCGACGCGCCGACGAAGGTGATGCAGACGGCGATTGCGCCGCTCAACGCCTCGAGCAACATCGAGTTCGCCTGGGTACCCTACACGCAGCCCAAGGACCCGGCGCCGGGGTACATCACCGTCATGCACTTCTCCGAGCTGCAGCTCCGCTCCAGCAACGCCACGCGCCAGTTCTACATCAACCTCAACGGCAACATGGTGTTTAGCCAGGGCTACACGCCGGCGTACCTCTACGCCGACGCCATCTTCAACAGCAACCCGTTCCTACGATACCCGCAGTACAACATCTCCATCAACGCCACCGCCAACTCGACGCTGCCACCGATCATCAACGCCATCGAGGTGTTCTCCGTCTTCTCCACCGCCACCGTTGGCACAGATGGTCAGGATGGTATGTAGATAGACAGACGGTAGAATACATAAGAGTAAAACGTACGGTGTGATGGTTTGTGCGTGTTACTGATCGAAAACATGGGTGCACTTGACAGCTTCCGCCATGATGGTGATCAAGGAAAAGTATCAGGTGAAGAAGAACTGGATGGGTGATCCGTGCGTTCCAAAGACGCTTGCGTGGGATAAGTTGACATGCAGCTATGACAGCTCCAAACCTGCAAGAATCACAGACATGTAAGTAATTCAGTCCACATGTACTCCCTCCGTCCAAAAAAAACCAACTAGACACGGATATGACACTACATAGTACAACGAATATGGACATGAGCTATGTTGTGTCACATCCGTGTTTAGGTGGGCTTTTTTTTAGGACGGAGGGAGTACTGAATATTGGACTTGCATAATGGAATTATGGAAGTATGGAACTCGCGGTCATCTGATGATATTCCTTTTGCAGAAATCTGTCATCCGGTGGTTTAAGTGGTGAGATATCGTCCGCTTTTGCGAATCTCAAGGCTCTTCAAAACTTGTATGTTATGAGGTTCAGAATGTTAATTTGTTGACCGTTTGTGGAATTTTGCGTTAAAAGACTTGCTTCATATCTTGCAGGGATCTGTCAAACAACAATTTGACAGGTTCGATTCCAGATGCACTTTCACAGTTGCCTTCGTTGGCAGTATTGTAAGTTTGGCAACTCCTGTCAAATTTTACTTTATTGCCTAGCATCATTTGTAACTGACATATGTATATAATTTATGGGCATATGGCTTCTTTAGAGATTTGACAGGAAATCAACTCAATGGTTCAATTCCATCTGGACTTCTCAAAAGAATTCAAGATGGTACCCTAAATATAAAGTAATTAAGTACACCCCCACTCTTCTCTTAGTAATCTTTGAATGTCCAAATTCAGTCAATTTGACAAAATAGACTGATTTGGCTAAACATCTTCATTCCATCAACAGATACGGAAATAACCCAAACCTCTGCACCAACGACAATTCATGTCAGCCAGAAAAACACAAGAGCAAGCTTGCCATCTATGTAGCTGTTCCTGTAGTTCTGGTTTTGGTGATAGTATCAGTCACAATACTGCTCTTTTGCCTTCTGGGACGAAAAAAGAAGCAAGGTGAGGCTTGTTACAAACATAGCAATTATCAACTCTATTTCTCTGTCCTTGAACGTTTCTGATGCTAGTAGTTCCATTCTTCGCTTATGAAGGATCAATGAACACTTCCGTAAAGCCGCAGAATGAGACAACGAGCTATGTGCCGACAAATGGCAGCCATGGGCATGGCTCATCAATGCAGCTTGAGAACCGACGGTTTACTTACAATGATTTAGAGAAGATAACAAACAACTTTCAGCGAGTGCTCGGCGAAGGAGGGTTTGGGAAGGTCTACGATGGCTTCTTGGAAGATGGCACTCAAGTGGCAGTCAAATTAAGGTCTGAATCTTCCAACCAAGGGGATAAGGAATTTCTCGCAGAGGTAGAATTTCTTCGGTTGAATTTGATCTTGCTACATAAAGATTCTACTAAGAAAAGTATGATTAATTAGTCAAGTTTTGCTTGTCTAGGCTCAGATTTTAACTCGGATTCACCACAAGAGCCTTGTATCTATGATCGGTTATTGCAAGGATGGGAAATACATGGCACTTGTCTATGAGTACATGTCAGAAGGAACCCTTCGAGAACATATTTCAGGTATGTACTTAAGTTGTTGTTCCCGATCAATTCGCAGAGTACATTGTAAAACTTCATCTAGTGGCTCATTTGATAGTCCTCATGATATCTCCCCCTTCTGTGTTCTCTTCCTATTTGCAGGTAAAAGAAACAACGGGAGATACTTAACCTGGAGAGAGAGGCTTCGAATCGCGCTGGAATCCGCTCAAGGTAACTACTTTAAAATTGTAATACTGTTTCGTGAGGTTTGATTTTACATTTTCTCTAGAAGGTTGATCAGTAATTAAATTTCCTGGTTAATGGTCAGGGCTAGAGTACCTACACAAGTGGTGCAATCCACCTCTTATTCACAGAGATGTGAAGGCTACCAACATTCTATTGAATGCGAGGCTAGAGGCTAAGATTGCTGATTTTGGCTTATCCAAGACGTTCAATCTTGAGAATGGCACACATGTATCTACGAACACGCTTGTTGGCACACCTGGATACGTGGATCCAGAGTATGTTAATCCATATGTATTTCTTGATGTTGTTATTTAGTGTTTTATGTGAGAAACACAAAGTTTAAGGCTTGTGGAACTAATTGAATGTGCAGGTACCAGGCAACAATGCAACCAACGACCAAGAGTGACGTCTATAGCTTTGGTGTTGTTCTATTGGAGCTGGTCACAGGGAAGCCGGCTGTCCTACGTGATCCAGAGCCCATAAGTATCATTCATTGGGCGCAACAGCGCCTAGCACAGGGTAATATTGAGGGAGTGGTGGATGCACGTATGCATGGTGACCATGATGTAAATGGTGTATGGAAGGCTACGGACATCGCACTCAAGTGTACCACACAAGTATCGGCACAACGGCCCACTATGACCGATGTGGTGGCACAACTGCAAGAGTGCCTCGAGCTCGAGGAGGGGCGTTGTGCCATCAGCAATGCGAACAACAATTTCTATACCGACAATAACAGCAACTCTAACTCAAGTTATGACATGTATGCCACTGACCACTCTATTGATGTAAGTCAGAACAGCGCTGCATTTGAGACGGAGCGTAATTTTGGAAGGATGCCATCAACGGCCACCGGTCCAGCTGCACGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020224

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020224&oldid=48980"