BGIOSGA020246

From RiceWiki
Revision as of 03:06, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020246| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020246, complete gene.| tag = OS05G05...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020246

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020246, complete gene.

LocusTag

OS05G0531500

Ensembl Transcript ID

BGIOSGA020246-TA

Ensembl Protein ID

BGIOSGA020246-PA

Length

2779

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:27803304..27806082

Sequence Coding Region

27803304..27803472,27803570..27803783,27803889..27803998,27804077..27804276,27804719..27804822
,27805226..27805413,27805494..27805693,27805873..27806082

Genome Context

<gbrowseImage1> name=IndicaChromosome05:27803304..27806082 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:27803304..27806082 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACAAGGCCTCTAATGACGTCCAGCGACCAATTCTCTGCTAGTAGCGTCAACAAAACTGAACTTCCAAATCGACTTCGTCTTTCATTTGCAAACTTTACACATCATCCTTGTGAAGGTTTCTCAGTTGCCCCTCCCCTGGTTGATCCGAAACGCACTGGACCACGACCATGTGATGTTTGCTACGTGCCTGTAGACCAGGCGTTCGCTCTTATGCCTCTACAACCTTCACCATCTCCTGTCCTTAAGAACTTAAGTTATGTATTTGAAGACAACATCACTGCAAATTTCTCAAATCAGGGCTCTGTATTTGGTGGGCATCCATCTCTGGAGCAGAGAAATAAATCTTTTGACATTCGTGAGTCTATGACTGTCCACTGTGGCTTTGTTAGAGGAAAGAAACCTGGCCAAGGTTCTGGATTTGATATCAATGATGATGATCTGTTAGAGATGGAGAAATGCCGTGAGCTGGTTGTAGCTTCTGCTATTTTTGGGAATTATGATATGATTCAACATCCAAGGAATGCCAGCGAATTTTCAAAGGCAAATGCATGTTTTTATATGTTTGTAGATGAAGAAACAGAGGCTTATGTAAAAAATTCTAGCTCATTGTACAGAAACAATAAAGTTGGCTTATGGAGGCTAGTGGTTGTTCGAAATCTCCCGTACGAAGATCCAAGGCGTACGGGGAAGATTCCTAAGCTTCTGCTCCATAGGCTTTTTCCAAATGTGAGATTTTCAGTTTGGATAGATGCAAAGCTTAAGCTCGTTGTGGACCCTTATCTACTACTTGAGAGGTTTTTGTGGAGGAAGAATGCTACTTTTGCTATCTCTCGGCACTACAAACGCTTTGATGTATTTGAAGAAGCAGAAGCTAATAAAGCTGCTGGCAAGTATGACAATGCATCAATTGATTACCAAATAGAGTTTTACCGAAATGAGGGCCTAACATATTATGCACCTGCTAAGCTTCCTATTACAAGTGATGTCCCTGAAGGTTGTGTCATCATCAGAGAGCACATTCCCATCACGAATCTCTTCACATGTCTTTGGTTCAATGAAGTTGACCGTTTCACCTCCAGGGATCAAATTAGTTTCAGCACCGTCCGGGACAAAATAAGGGCTAGAGTTGGCTGGATGCCTGAAATGTTCCTGGACTGCGAAAGACGCAACTTCGTTATTCAGGGATACCACAGGGAGCTACTAGAGCAAATGATTGCATCCGGTTGGAAGCCCCCTCCAATGGCCAGTGAACCATCTCGAAAACTCAGATTAGGTAGCAGGAAAGCTCCTCCATCAAAGAAGTCTTCCATGAAGCGGAAAAGAGTGAAGAAATCGAGCTCACGGAGGCGTCTCCCCAAACCAATCACTGGGATGACTGATTCTACTACCTGA</cdnaseq>

Protein Sequence

<aaseq>MTRPLMTSSDQFSASSVNKTELPNRLRLSFANFTHHPCEGFSVAPPLVDPKRTGPRPCDVCYVPVDQAFALMPLQPSPSPVLKNLSYVFEDNITANFSNQGSVFGGHPSLEQRNKSFDIRESMTVHCGFVRGKKPGQGSGFDINDDDLLEMEKCRELVVASAIFGNYDMIQHPRNASEFSKANACFYMFVDEETEAYVKNSSSLYRNNKVGLWRLVVVRNLPYEDPRRTGKIPKLLLHRLFPNVRFSVWIDAKLKLVVDPYLLLERFLWRKNATFAISRHYKRFDVFEEAEANKAAGKYDNASIDYQIEFYRNEGLTYYAPAKLPITSDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQISFSTVRDKIRARVGWMPEMFLDCERRNFVIQGYHRELLEQMIASGWKPPPMASEPSRKLRLGSRKAPPSKKSSMKRKRVKKSSSRRRLPKPITGMTDSTT</aaseq>

Gene Sequence

<dnaseqindica>1..169#267..480#586..695#774..973#1416..1519#1923..2110#2191..2390#2570..2779#ATGACAAGGCCTCTAATGACGTCCAGCGACCAATTCTCTGCTAGTAGCGTCAACAAAACTGAACTTCCAAATCGACTTCGTCTTTCATTTGCAAACTTTACACATCATCCTTGTGAAGGTTTCTCAGTTGCCCCTCCCCTGGTTGATCCGAAACGCACTGGACCACGACGTAAGCTTAGTTCTTTACATCTTTTTGGTTAGCGTTGCAAGTTTGTTTGTGTTTGACTTGTCATTAATCGTAAGATATGTTCTCATTTTCCCTGTAGCATGTGATGTTTGCTACGTGCCTGTAGACCAGGCGTTCGCTCTTATGCCTCTACAACCTTCACCATCTCCTGTCCTTAAGAACTTAAGTTATGTATTTGAAGACAACATCACTGCAAATTTCTCAAATCAGGGCTCTGTATTTGGTGGGCATCCATCTCTGGAGCAGAGAAATAAATCTTTTGACATTCGTGAGTCTATGACTGTCCACTGTGGGTAGGTTACTTGCATCTTCTTACCCATATTTAATCCAGAACTTCTGCCAAAACTTAATGGCTGAAATGTGTATGCTGAATGAAATGATTTGTGCTATTTTATCAGCTTTGTTAGAGGAAAGAAACCTGGCCAAGGTTCTGGATTTGATATCAATGATGATGATCTGTTAGAGATGGAGAAATGCCGTGAGCTGGTTGTAGCTTCTGCTATTTTTGGTAACATCACTGTTCAGTAATAGTATTAATTATGATTGCGTTCTGCTTGTCTGCTCACACTTTGATACCGTTTTCCAGGGAATTATGATATGATTCAACATCCAAGGAATGCCAGCGAATTTTCAAAGGCAAATGCATGTTTTTATATGTTTGTAGATGAAGAAACAGAGGCTTATGTAAAAAATTCTAGCTCATTGTACAGAAACAATAAAGTTGGCTTATGGAGGCTAGTGGTTGTTCGAAATCTCCCGTACGAAGATCCAAGGCGTACGGGGAAGGTGCCATTCTTATGACTTGTAATTTCTGTCGACGCTATATCCTTGTGATGCATTACTAGCTCTCGGTATATTTACAGGAGACAAACAAACCTCATGAACCTCATACTTGAATGCTAACATAGTATAATTACGTGAGGCTTCTTACTATATTGCTTAAGTGGTTTGGGTCCAAGTAGAGAATTGTTGAAATGTCATGTGCAATTCAGGATAAATTAAAATACTAATCCATGAGAAAAGTAATGTATAAAAGTGATACAGTCAGTTTGAGTGGGCACTAGGCAAACTTGTTGTAGGGGCCACTGAAGAGCGTATGTTGCAAACAAATGTTTGTCACTGATATTGAAGTTCCCAAACTGAAAGTTGTTGCTTTAATGTGTAGGCCCACGTTATATGTTGCCCTTGTTTTGTGCTTGTTAATTGAACAAACATCTAATTTGTGCAGATTCCTAAGCTTCTGCTCCATAGGCTTTTTCCAAATGTGAGATTTTCAGTTTGGATAGATGCAAAGCTTAAGCTCGTTGTGGACCCTTATCTACTACTTGAGAGGTATGATTTATGTGAAGATCTTGGTTTATTATATGCTATTTCTTTAAGGAGAGAAACCTGTCATGTGCTATAGTTTTGTCAAATTAAAATTTGGGCTGTTCTACACCTTGGCATCTTTGCAACAATTTCAACAGCCACCATTTGCCATTACTTCTATCAACGGATTACTGCATATTTAAGTCTGTTGAGGATATTAGACTAGAAAGATTATCAATGGCTTTCTCACAAGACGCTTTATTTATAACAGCTACTCACTCAATTTCTTAGTATTTTGTTTGTATTTCCTTGTTGGTCTGCTGACATTAGAATTTGGAACTTACCAGCTTTTCATTATTTTAAGATCGCAATATTGCAATATTTGACTACTGTGTTGAGTCTGACTGTGTCATATCATGGCTATTAGGTTTTTGTGGAGGAAGAATGCTACTTTTGCTATCTCTCGGCACTACAAACGCTTTGATGTATTTGAAGAAGCAGAAGCTAATAAAGCTGCTGGCAAGTATGACAATGCATCAATTGATTACCAAATAGAGTTTTACCGAAATGAGGGCCTAACATATTATGCACCTGCTAAGCTTCCTATTACAAGTGGTCAGTGATCTCATTGAAGTATGGCGAAAACAGTTCAGTTACTTTCTGAGATTTTAACTGTCCTTTTTGCATTGGTTTAGATGTCCCTGAAGGTTGTGTCATCATCAGAGAGCACATTCCCATCACGAATCTCTTCACATGTCTTTGGTTCAATGAAGTTGACCGTTTCACCTCCAGGGATCAAATTAGTTTCAGCACCGTCCGGGACAAAATAAGGGCTAGAGTTGGCTGGATGCCTGAAATGTTCCTGGACTGCGAAAGACGCAACTTCGTTATTCAGGTTTCTCATCCTACTACATAATTTTTGTTTTCACATACTTCCTAGGACACAAGCACACACTACCTAACCTGCAGAACTAAACTACCAGTGCCCTGTATTTCCTGTGTCCTATTGGCAGCACATGTTGAACCTCATAAGCTTACTAGTGTATCTGTTTTTGCTGTTTGACATCTCACCAGGGATACCACAGGGAGCTACTAGAGCAAATGATTGCATCCGGTTGGAAGCCCCCTCCAATGGCCAGTGAACCATCTCGAAAACTCAGATTAGGTAGCAGGAAAGCTCCTCCATCAAAGAAGTCTTCCATGAAGCGGAAAAGAGTGAAGAAATCGAGCTCACGGAGGCGTCTCCCCAAACCAATCACTGGGATGACTGATTCTACTACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020246