BGIOSGA020432

From RiceWiki
Revision as of 03:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020432| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020432, complete gene.| tag = OsI_211...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020432

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020432, complete gene.

LocusTag

OsI_21131

Ensembl Transcript ID

BGIOSGA020432-TA

Ensembl Protein ID

BGIOSGA020432-PA

Length

6989

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30233857..30240845

Sequence Coding Region

30233857..30233909,30234100..30234168,30234267..30234325,30234421..30234465,30234652..30234756
,30235489..30235525,30235952..30236048,30236206..30236287,30236367..30236445
,30236555..30236718,30237406..30237449,30237530..30237685,30237782..30238003
,30238245..30238392,30238456..30238543,30239540..30239667,30239767..30239851
,30239935..30240047,30240763..30240845

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30233857..30240845 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30233857..30240845 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTCTACTCGCACCAGCTCCTCGCGCGGAAGGCTCCGCTCGGCCAGATATGGATGGCGGCGACGCTTCACTCGAAGATCAACCGGAAGCGGCTTGACAAGCTCGACATCATCAAAATCTGTGAGGAGATTTTGAACCCGTCGGTACCCATGGCACTAAGGCTCTCCGGAATTCTCATGGGTGGTGTGGCGATCGTGTACGAGAGGAAGGTGAAGGCTCTGTATGATTACGCTTGTACTAACTCCTCACACAGATTGAGATCAACGAGGCATGGCGGGTCAAGCCAGTCGCAGACCCCACCGTACTTCCCAAGGGCAAAACCCAAGCCAATTACTGGTGCCAAGGGAGCAGGTCTGAGGGCCGTCTGGTATGAAGCAGTAACACTGCCAGAGAATATCATGGATATGGATGTGGAGCAGCCCATGCTTTTCTCAGAGGCTGATACTACAAGGTTCCGGGGAATGCGTTTGGAGGATTTGGATGACCAATACATTAATGTCAACCTAGACGATGATGACTTCTCACGTGCTGAGAATCATCACCAAGCTGATGCAGAAAATATCACCCTGGCTGATAATTTCGGGTCTGGGCTTGGAGAGACTGATGTGTTCAATCGTTTTGAGAGATTCGACATAACAGATGATGATGCAACTTTCAATGTCACTCCTGATGGACACCCACAGGTTCCAAGTAATCTGGTTCCTTCTCCACCTAGGCAGGAAGACTCTCCTCAGCAACAAGAAAACCATCATGCTGCCTCATCCCCTCTTCACGAAGAAGCTCAACAAGGGGGGGCATCTGTAAAAAATGAGCAAGAGCAGCAGAAGATGAAGGGTCAGCAACCTGCTAAATCATCAAAGAGGAAAAAACGTAGGAAAGATGATGAGGTGATGATGGATAACGACCAGATAATGATCCCAGGAAATGTATATCAAACATGGCTGAAGGATCCATCAAGCCTCATTACCAAAAGGCACAGAATCAACAGTAAAGTTAATCTTATTCGGTCAATCAAGATAAGAGACCTCATGGACTTGCCCCTCGTTTCTCTAATATCTTCCTTGGAGAAGTCACCCTTAGAATTTTATTATCCTAAGGAACTTATGCAGCTTTGGAAGGAATGTACTGAAGTCAAGTCCCCAAAAGCTCCATCTTCAGGTTACTACACAATTTGTAGTTTTCTTTCACCTTTCTGGATCACCAAGGGAACTCCTCAGGTTGATAATGACAGGGAAATGGGATTTCACCCAGTGGACTTTGCAGATGACATCGAAAAACTCCGAGGAAACACTAGTGGGGAATATGGAAGAGATTATGATGCTTTTCACAGTGATCATAGTGTTACTCCTGGAAGTCCTGGGCTAAGTCGCAGGTCTGCTTCAAGCTCTGGTGGCTCTGGACGGGGATTTACGCAGTTGGATCCAGAAGTACAGTTGCCATCCGGAAGGTCCAAGAGGCAGCATTCATCTGGAAAAAGCTTTGGGAACCTCGATCCAGTTGAAGAAGAATTCCCATTCGAGCAAGAACTTAGAGATTTCAAGATGAGAAGGCTTTCAGATGTTGGGCCAACTCCAGACCTGCTGGAAGAAATCGAACCTACTCAAACCCCATATGAAAAGAAATCCAATCCTATCGACCAGGTCACACAATCAATCCACTCGTACCTCAAGCTACACTTTGACACCCCAGGGGCCTCACAGTCTGAATCATTAAGTCAGCTAGCACATGGGATGACTACAGGAAAGGCTGCCCGACTCTTCTATCAAGCATGCGTTTTAGCAACTCATGATTTTATCAAGGTTAACCAGCTGGAACCATACGGAGACATCTTGATCTCGAGGGGACCAAAGATGTGA</cdnaseq>

Protein Sequence

<aaseq>MFYSHQLLARKAPLGQIWMAATLHSKINRKRLDKLDIIKICEEILNPSVPMALRLSGILMGGVAIVYERKVKALYDYACTNSSHRLRSTRHGGSSQSQTPPYFPRAKPKPITGAKGAGLRAVWYEAVTLPENIMDMDVEQPMLFSEADTTRFRGMRLEDLDDQYINVNLDDDDFSRAENHHQADAENITLADNFGSGLGETDVFNRFERFDITDDDATFNVTPDGHPQVPSNLVPSPPRQEDSPQQQENHHAASSPLHEEAQQGGASVKNEQEQQKMKGQQPAKSSKRKKRRKDDEVMMDNDQIMIPGNVYQTWLKDPSSLITKRHRINSKVNLIRSIKIRDLMDLPLVSLISSLEKSPLEFYYPKELMQLWKECTEVKSPKAPSSGYYTICSFLSPFWITKGTPQVDNDREMGFHPVDFADDIEKLRGNTSGEYGRDYDAFHSDHSVTPGSPGLSRRSASSSGGSGRGFTQLDPEVQLPSGRSKRQHSSGKSFGNLDPVEEEFPFEQELRDFKMRRLSDVGPTPDLLEEIEPTQTPYEKKSNPIDQVTQSIHSYLKLHFDTPGASQSESLSQLAHGMTTGKAARLFYQACVLATHDFIKVNQLEPYGDILISRGPKM</aaseq>

Gene Sequence

<dnaseqindica>1..53#244..312#411..469#565..609#796..900#1633..1669#2096..2192#2350..2431#2511..2589#2699..2862#3550..3593#3674..3829#3926..4147#4389..4536#4600..4687#5684..5811#5911..5995#6079..6191#6907..6989#ATGTTCTACTCGCACCAGCTCCTCGCGCGGAAGGCTCCGCTCGGCCAGATATGGTGGGTTTGCTTCGCTCTCCGCTCCTCTCGATCGCGTCCTTTCGGCTTCTCTTCTCATGCGCCGTTCTGCGGTGCTCCGTTCTATATTGTTTTCTGCGATTTCTCTGCTCGTTCCGCTCCGAAATCCGAATGTTCGCCACTTGGTTGGAGTTGATTAGGCCGCTGGTTACTCCGCTTTTTTTTTTCGCAGGATGGCGGCGACGCTTCACTCGAAGATCAACCGGAAGCGGCTTGACAAGCTCGACATCATCAAAATCTGGTGAGCGAATTAGTCCGAATCCAGTTGTCTCTGATTTCTTCGTTTCGAACTTGACGGTTTTTTTTGGGGGGATTTTGTGCGTGTGGTTTTTGGGTTAGTGAGGAGATTTTGAACCCGTCGGTACCCATGGCACTAAGGCTCTCCGGAATTCTCATGGGTGAGTCCAGTTTGCTTGTTGTCTCCATAGTTCCGATCGCATTTGTTTGGTGATATTTTCTGATGTGGGTGCTTGCGTCGTGGGAGTGTGAGTAGGTGGTGTGGCGATCGTGTACGAGAGGAAGGTGAAGGCTCTGTATGGTGAGTTGCTCCCTGATTGCTTCTCTTTTGTTTCCATTTTTTTTGGATTCGTTATAGACTCAAACTGTGTGAGATCTTCTTCGCAGATGATGTGTCTCGGTTTCTGGTAAAATTCGAGTTCGATTTTCACCTAATTTTGGTGCCTCCTCCTTGATCCATTTGCCTGTCTATGCTAACATGGTTCAGATTACGCTTGTACTAACTCCTCACACAGATTGAGATCAACGAGGCATGGCGGGTCAAGCCAGTCGCAGACCCCACCGTACTTCCCAAGGGCAAAACCCAAGCCAAGTAAGTGCCCTCTTTGTTTCCATGACCTTCTAGAACTAGAAGTTTCTAGATGTTCTGTGCACGGTTTTGGGTTCGAGGGAAGATTGAAGAACATGCTATTATGTTGGTGACCGAGGGGAGTTTGCTTTTGTTTCCCTGCTGCCAGGGATTGTGAGTTTGTGTGTGATTTTCACCATCCGATGCTAATCTGATGGACTCGTCATTTGACACAGTTGCAAGTTTTGATATGTCATCAGCTTACTTGGTTCTGATTAGAACATGCTGCATCTGTGTAATGTTGATTTTATGATGATACTATCTCCTTGCAGCATAGTACATTGTTATGTTTTCAGATGTACCTGATGTTGTCATATGACTGATTGTTCTGTTCTACCTGTTGTCTATTGGCGGTTCATGGGACCCTGCTGTTACTTGCCTCTTGTTGTCTTGCTGACTTTGGTAGCAGCCGATGTCTGTATTATGCAGGAGTACTATTCTACAAATGATCTGTTTCCTGGCAGCATAAATTTGTCTGTATGTTGTTCCAGTATATGTAGGTCCTCTACATTTGTAGGGTGATGAAGGGCTTTTGCTTCCCCACAGTGTTTCCTCCTCTCTTAATGAAATGATATGCAACTCTCTTGCATATTCAAGAAAAAAAAACTGGAAGGGCATTAGGCAGTTAGGCAGGCATTGTCAGTGAGCGATACATGCTTTATGGGGATGAACATTTGACTTTTTCTTGGGTGTCAGTTACTGGTGCCAAGGGAGCAGGTCTGAGGGCCGTCTGGTACTTGAGAAATGTTGCTATCTTAGAGTCTAGGGAATTCCATCACCTTTGGGAACCGGAGGCAAACATTTCTTAATCTTGTATCATGCTCGAAGGACTGACTCTTGTGGGTGTACCATTTCCTTCCATTGTGGCCTGCATCTGATATGTAACCATGTGGCTGTGCCATCATCCCCTTGATCCCTTCGGAACTATGTTCGATAGTTACTGCAATGTTCACGTGATGTTGATACCTGTACTGTTGCAATGAGTTTAACCCTCTTGGAGTCCTGGATAGTTCCTCTGAATGATTGTATCCCAAGGGTCTTTTCAACTTACTTTTGTAAATAGCATAGAGTGGGTATAAGTTGGTGGATGGAGAATGATATTTTGTACCAAGAGTAAAACAGTAATGGTTTGCTCATCTAAACTTGGGGCTTCATGCAGGTATGAAGCAGTAACACTGCCAGAGAATATCATGGATATGGATGTGGAGCAGCCCATGCTTTTCTCAGAGGCTGATACTACAAGGTTCCGGGGAATGGTAATCCCTGTAATATGTATATTTCGGCAGTGTCTGATTGTATGCATTGAAAGATGGCATTAAGTTATGAGCAATAACCACGAGATAGTCTTGCTTTCAGTCTCCTGACTTTTGCCAGATTGTCTCTATTCCTCTGAAATCCGTCATGCATGTGCAGCGTTTGGAGGATTTGGATGACCAATACATTAATGTCAACCTAGACGATGATGACTTCTCACGTGCTGAGAATCATCACCAAGGTTTTCATTTCTTTTCTTATGAATTACTCTTTGTGGTTGCTTAAGAGGTGTACTTTCTGACTGAAATATGTTATCTCAGCTGATGCAGAAAATATCACCCTGGCTGATAATTTCGGGTCTGGGCTTGGAGAGACTGATGTGTTCAATCGTTTTGAGAGGTGAAGCAAAATTTTATTCTTCTCTTATTCTACCATTCATTTTTTGCACTTCTTGTTCCTTATTTTGGCCAGTACAATTATTCATTGAGCAATGTTACAATGTCACCAGATTCGACATAACAGATGATGATGCAACTTTCAATGTCACTCCTGATGGACACCCACAGGTTCCAAGTAATCTGGTTCCTTCTCCACCTAGGCAGGAAGACTCTCCTCAGCAACAAGAAAACCATCATGCTGCCTCATCCCCTCTTCACGAAGAAGCTCAACAAGGTCAATTCAAGCACATGGTTTGGTCTATTTGATCCTAAATTTGGAAAGGGTACTATCATCCTGTAAATTGGGATTTTTTTTTCCAGTTTCCATGCCAAAAGACAACAATTCTCATCTCTGTTTTTTTAGCATGCCACAGATGCAAATGATATTTCAAACAAGTAAAACTTCCATCCAAATATATCTCAGTGAATTTATGATTTGATGTAGTTTCTTCAGGGATATGAACTTGATGGTTATGTCAATATCTCTTAACAGCTAGATATTCTATCTTATCATATACTCTGCTATATTATGTTGGTTAAGCAGCTAAAAGTTCACTCATCATCTCCTGTTGCCTTTCTACATTTCCAACGGTTGGATTTTCGCGAGGCTAGGTAGAGATGCTGAGCGATTGCTATTGAATTTGCTACATGTTATGTCATTGAATTTGGCTTTTGTCAACGGGATAATAAAACACATTGTGTAACTTGTCACCATTCACACTAGTTTACTGACTGAAATTCAATTTATATTATATTTGAATCTTTTCTACTTGCTAAACAAGACTTGCATATAGCCTCTTCCTCGTGACTATCTGTACTTCAGGTTTGCTATATCTGATATAAGTGCTGGACATGGTTTGGGTACATTAATATGTGCCATAGTGCAAGTGCCTTGTTGCAATTACTGACAACTTTTCTGCAGGGGGGGCATCTGTAAAAAATGAGCAAGAGCAGCAGAAGATGAAGGTTTGTGATCAAGCGAGCCGTTAGCTTCAGGAACATCTAGATGAAGAAGATAATTGTTTTGTTTGATATTGTTTAACCAGGGTCAGCAACCTGCTAAATCATCAAAGAGGAAAAAACGTAGGAAAGATGATGAGGTGATGATGGATAACGACCAGATAATGATCCCAGGAAATGTATATCAAACATGGCTGAAGGATCCATCAAGCCTCATTACCAAAAGGCACAGAATCAACAGTGTATGTAATTGCTTTGATTACCTAATTCTGTGTAGAGTTTTGTAACTATGCAGAATTTTGTGAACATATCTGATGTTTTGCCGTGTAATATTGCAGAAAGTTAATCTTATTCGGTCAATCAAGATAAGAGACCTCATGGACTTGCCCCTCGTTTCTCTAATATCTTCCTTGGAGAAGTCACCCTTAGAATTTTATTATCCTAAGGAACTTATGCAGCTTTGGAAGGAATGTACTGAAGTCAAGTCCCCAAAAGCTCCATCTTCAGGTTACTACACAATTTGTAGTTTTCTTTCACCTTTCTGGATCACCAAGGGAACTGTAAGTTTTTTATAATTTAATCTGCTAAGTTCGAACTGAAAAGGTTGCAATCTTTTTTAAAGGAGGGCAGCAGTCATCATCACCAGAACAACAGCAAAGAAACTTGCCTCCTCAGGCATTTCCAACCCAGGTTATTTCTAAATTTATATGTTTATGGAAATGATTTATGCTAGCTTTTCCTATTGAGCTGTAACATTTACATTCATTCTTGAACTTGTCTGATAAGTGGTTCAATTTGCAGCCTCAGGTTGATAATGACAGGGAAATGGGATTTCACCCAGTGGACTTTGCAGATGACATCGAAAAACTCCGAGGAAACACTAGTGGGGAATATGGAAGAGATTATGATGCTTTTCACAGTGATCATAGTGTTACTCCTGGAAGTCCTGGTAAGTACAAAAAACAATATATATTATTTATTTAGACACTGAATGACATCAGTCCTGCTGCAGGGCTAAGTCGCAGGTCTGCTTCAAGCTCTGGTGGCTCTGGACGGGGATTTACGCAGTTGGATCCAGAAGTACAGTTGCCATCCGGAAGGTGAGTGTTGATTAATAGCAATCTTCACTAGTTTTCTGAAATATGACTTGCTCCTGGAATAAATAAAAAGTTATCCGTGCAAACTTTTGAAGATGCATGTCTTTATACTGGAGCCTCTTTGGTTTATGTTCCAAAGCATCGAAGTGGTTAGTTGTCTTATTGATGAAGTGTTAAGCAAGAAGAAAAGGAAACGGAGATTGTTACCCCCCCCTCCAGCGGTAACCGCTGAAAACCACGTGAAATTCGTCCTCAAATATTTGAATTAAAAATCGGCGGTTTTGCGTTTTCGGCACAGTAACCGCGATATTCGCGCGGTTACTGCCAATTGTGTAGCAGAATAGAAACACTCTTAAAAAAGTTTAAAAAAGCACTTAAATGTGTGTAGAAATTGGGGATAATTAGAAGAATATATAGGATACTTGCAAACCTAACTTTTGGGTGTAAAATACAAAAATTCTGCATGACATTTTCTATGTTATGGACTTCGAAGCAATTCAACATTTCGTAGCATAATAATTCAACAACAACAATTCAACAACCTCACATTTGAAAGCATGTGCCGAGAGAGAGCGATAGAGATAGATGAGAGGACCTAGGAGATATTTTTCCCACTTATGGGACTTAATGGGCCAGATAAACAGTGCAACTGTGCAACCTAAGGTCCATTACATTTTTCTTTTTTCCATTTTCTAATGAACATTCGGTTTTACCCTCAAATTTGAATTTATCTTACTCTTTTTCAAAAAATTTCTTCACTGTCTACCACTACAAATCAAGAAGTTTTTTTATTTGTTTGGAATTTTGAATTTGGGCAAAATTCATCAAACCCTACCACCGGTAACCCTTACTGTACCCCCGCGGTAAGCGCGGTTACCGGTGGTAAGGGAAACCCTGGTCTAGGCTACTTGACTATCAACTATCAAGTGGCAGCTTCCTATCTATGGTCCTTCTATTTTCATAGAGGTCTTAGTACAACTGCGTGAGGTCATTGAACAGGTCCAAGAGGCAGCATTCATCTGGAAAAAGCTTTGGGAACCTCGATCCAGTTGAAGAAGAATTCCCATTCGAGCAAGAACTTAGAGATTTCAAGATGAGAAGGCTTTCAGATGTTGGGCCAACTCCAGGTTGACTTCTTTTCAGTCCTTATTTCAAATGATTCTATACAAAAGTGTGGAAATTTATTTCCCCGTCATCATACCGATTAACTTTTAATTTGGTCACAGACCTGCTGGAAGAAATCGAACCTACTCAAACCCCATATGAAAAGAAATCCAATCCTATCGACCAGGTCACACAATCAATCCACTCGTAAGTATTCAACTATACATTATGTTTGTTCCACAGATTACAGTAGATGTATACTCTGTGATCATCAAACTAAATCCATCCAGGTACCTCAAGCTACACTTTGACACCCCAGGGGCCTCACAGTCTGAATCATTAAGTCAGCTAGCACATGGGATGACTACAGGAAAGGCTGCCCGACTCTTCTATCAAGCATGCGGTATGAGTTCTATAATCCCAATGCGAGTCAACAGATGATGCAATCGCTAGAGTAAACATAATGTTAACATTTCATTTGCTGGTTTGATGGTTATTTATAGTTTCCGTAAGTTCATTTCAACACTTGATAAGCCATGTGTACTTCCTTTCCATATTGCAACATTGCAATGAAATATTCCAACCATTGTTTCAAGTTATGATATCACCGAAACCTTTTAGGGTCATTACGTTTTTCCCAGGCTTCTCTCATTACATTGACCAAGTAAATATAATAAGTTCACTTTATTAGTTCATGTAGTGTTAAGGGAGGAAAACAAATGTGCAATAGCACTATTTCCTGAGTTGGATAAGTGGGCAACACCTAGTTTGCTTAGCCATAGACAGATGTTGGAAAATCTTGAAGAAGTACCTTGGAAATTCAATTGTACATCATTGTGGCTATGTATTTTTTGTTTCTTTTTCAGATTTTAGCCATGTTTGATGGACGAGTTAGTGATTTTAACTATGTCAATAATGGTTATGTTTCTTTTCTCCCTCGATGAGAGAGGATGAGGGCCTAACACCATGTGTGGGCAAGATCGGTGTTCACAAAAGTTTGGTTAGTGTTTTATATTCTTAGCTTTACTGTTTAGCGTGGCAGTTTGATGTTTTTAGGTGCTTGTATGTGTTATTATTGGTTCAGTACTTGTATTTACTGAGGACCCTTTGTTCTGCAGTTTTAGCAACTCATGATTTTATCAAGGTTAACCAGCTGGAACCATACGGAGACATCTTGATCTCGAGGGGACCAAAGATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020432