BGIOSGA020440

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Revision as of 03:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020440| Description = cDNA clone:J023014J06, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA020440, complete gene.| ta...")
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Gene Name

BGIOSGA020440

Description

cDNA clone:J023014J06, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA020440, complete gene.

LocusTag

MPK20-2

Ensembl Transcript ID

BGIOSGA020440-TA

Ensembl Protein ID

BGIOSGA020440-PA

Length

5198

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30354790..30359987

Sequence Coding Region

30354790..30354813,30355628..30356033,30357004..30357131,30357220..30357279,30357762..30357911
,30358010..30358165,30358309..30358520,30358646..30358744,30359290..30359459
,30359539..30359987

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30354790..30359987 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30354790..30359987 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCAGCAGGAGCAGCGGAAGAAGAGCTCTGCGGAGGAGTTTTTTACAGAGTATGGTGATGCGAACCGGTACAGGATCCAAGAAGTCATTGGTAAGGGAAGCTATGGGGTTGTGTGCTCTGCCATTGATTTGCACACTAGACAGAAGGTGGCGATCAAGAAGGTGCACAATATTTTTGAGCATGTCTCGGATGCTGCGCGTATTCTCCGTGAGATCAAGCTTCTGAGACTCCTAAGGCATCCGGACATTGTTGAGATCAAGCACATTATGCTACCTCCGTCAAGAAGGGACTTCAAAGATATTTATGTTGTTTTTGAGCTTATGGAATCTGATCTCCACCAAGTTATAAAGGCTAATGATGACTTAACAAAAGAGCACTACCAATTTTTCCTTTATCAATTACTCCGGGCCCTCAAATACATTCATACTGCTAGTGTTTATCACCGTGATCTGAAGCCCAAGAACATTTTAGCAAATTCTAACTGCAAACTGAAAATATGTGATTTCGGACTAGCACGAGTTGCATTCAATGATACCCCAACAACTGTCTTCTGGACGGATTATGTAGCAACAAGATGGTACAGGGCTCCAGAGCTCTGTGGATCCTTCTTCTCAAAGTATACACCAGCTATTGACATTTGGAGCATTGGGTGCATCTTTGCTGAGGTGTTGACAGGGAAGCCTTTGTTTCCTGGTAAAAATGTTGTCCATCAGTTAGACTTGATGACTGATCTTCTAGGAACACCTTCCATGGATACAATTTCCCGGGTTCGGAATGAGAAAGCAAGACGGTACTTGAGCAGCATGAGAAAGAAAGATCCAGTCCCCTTCTCTCAAAAGTTTCCTAATGCAGATCCTTTGGCACTAAAACTCTTGCAACGGTTATTAGCCTTTGATCCAAAGGACCGTCCAACTGCTGAAGAGGCATTGACTGATCCATACTTTAAAGGCCTTTCCAAGATTGATAGAGAACCATCATGCCAGCCAATCAGAAAACTGGAGTTTGAATTTGAGCAGAAAAAATTGTCTAAGGAAGATATAAGGGAGCTGATATTCCAGGAGATATTGGAATATCATCCACAATTGCAGAAGAACTACAGAAATGGAACAGAGAGAGCAACCTTTCTCTACCCAAGTGCGGTTGATCAGTTTAAGAAGCAGTTCTCTAATCTTGAAGAAAGCAATGGAAGTGGCTCAGCAATTCCAATGGAAAGAAAACATGCATCGCTTCCTAGGTCTACTACTGTTCACTCTACTCCAATTCCTCCCAAGGAACAACCTCTTGCGGCCTCATTGAAGAGCAGCAGGCCTGTCTCTGATGAACCTTGTAAAAACCCCTGGGTCATGGGAGGATTTTCTGGAAATATTCCCACTTCTTCTCAGGTTTCACAAGTGGCAAAACCAGTGGCACCAGGGAGACCTGTTGGGTCAGTATTTCCTTATGAGACTGGAAGCACCAATGATCCTTATGGTCCAAGGGGACCAGTGATGAGTTCAGGGTATCCTCCCCAGCAACAAATCTCACAAGCATATGGTTATCATCAAGTGCCTGCAAGGATGAACTGTGTTGAACAATCACAAGCCATGGATGCTTATAAAATGCATTCACAGTCACAGACGCAGGCCTATGCTTATCCGAACAGCAAAGTCACGGCTGATGTTGCTCTGGACATGAGAGGATCCACGTTCCATCATTCAGCAGGATCAAAGAACGGCTCGTTAGATAGAATGGTAACACAGACTGACATATACACAAGATCTCTTAACGGTATTGTTGCTGCCGCGACTTCGGCAGGCGTTGGTACTAACAGAAAGGTTGGTGCTGTACCCATCAGCACCTCAAGGATGTATTAG</cdnaseq>

Protein Sequence

<aaseq>MQQEQRKKSSAEEFFTEYGDANRYRIQEVIGKGSYGVVCSAIDLHTRQKVAIKKVHNIFEHVSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTASVYHRDLKPKNILANSNCKLKICDFGLARVAFNDTPTTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSMDTISRVRNEKARRYLSSMRKKDPVPFSQKFPNADPLALKLLQRLLAFDPKDRPTAEEALTDPYFKGLSKIDREPSCQPIRKLEFEFEQKKLSKEDIRELIFQEILEYHPQLQKNYRNGTERATFLYPSAVDQFKKQFSNLEESNGSGSAIPMERKHASLPRSTTVHSTPIPPKEQPLAASLKSSRPVSDEPCKNPWVMGGFSGNIPTSSQVSQVAKPVAPGRPVGSVFPYETGSTNDPYGPRGPVMSSGYPPQQQISQAYGYHQVPARMNCVEQSQAMDAYKMHSQSQTQAYAYPNSKVTADVALDMRGSTFHHSAGSKNGSLDRMVTQTDIYTRSLNGIVAAATSAGVGTNRKVGAVPISTSRMY</aaseq>

Gene Sequence

<dnaseqindica>1..24#839..1244#2215..2342#2431..2490#2973..3122#3221..3376#3520..3731#3857..3955#4501..4670#4750..5198#ATGCAGCAGGAGCAGCGGAAGAAGGTGGGTTTCCCGGGTTCCGGTGATCTCTCGCCCCTCTTCCCCCCCTCGTGTTTCTCTGTGTAGCTCTCTGGAACGTATATGGGTGCCCGATTGATGTTGGTGCGATGCGCGAATCGCCTCGGTGTCCTTCGATGTTTTTGTCTTGTTATTTTGTTCTTTATAAGTTGTGGATTGTCTAATGGCGTTCTGGTGTTGCTGTTCATTTCAGTTCTAGCGCGCGATTTGCAAATAGGCTAGTTTTTTAACTCCCCATCGCCATTTTTACAGAAACTTTTTTGAGATTTTTTTTTACTTTTTTTTACATGTTCTAATGGATTAGTTATTGCGTTGTTCATCATGGACGAAATGTGCGATCTAGCTAGCAATCTGGAGTATGTGGTTGAAATGGCCAAATGCGATGTGCACCGAACGGTGAGTTACGAACAGCTCATCCTTCACATGCCAAAGTTGACCATTACCGTGTCGCTGCGAGATGCTTCTGCGCCGAACTAAACAACGCCGCATGCTGCTGCTTTGCCCTGTCGGTGGGAAAAAGCTTTTCCCTTACCTCGTGTACTCGTGTGGGGCTCCCGGCTTCGGTAATGCCCACAAGCAAACCCATCTCGGTGGGAAAACGAAAACAACAGTTCGTTGCTGTGTCCATGATTTAATGCTGGTGGAAGATGGAAGCTTCTCAATGTTCGGTTTCGAATTGCAATAATTTTGTGACCTCAACAATATGGTGCCGTTTTTTTTATGAGATTGATTATATGAAGTTCATTGCAATCTTGATGGGCTGTTGATTCGGTGTGTGAAATTTCTTTTTTTTTTTCAGAGCTCTGCGGAGGAGTTTTTTACAGAGTATGGTGATGCGAACCGGTACAGGATCCAAGAAGTCATTGGTAAGGGAAGCTATGGGGTTGTGTGCTCTGCCATTGATTTGCACACTAGACAGAAGGTGGCGATCAAGAAGGTGCACAATATTTTTGAGCATGTCTCGGATGCTGCGCGTATTCTCCGTGAGATCAAGCTTCTGAGACTCCTAAGGCATCCGGACATTGTTGAGATCAAGCACATTATGCTACCTCCGTCAAGAAGGGACTTCAAAGATATTTATGTTGTTTTTGAGCTTATGGAATCTGATCTCCACCAAGTTATAAAGGCTAATGATGACTTAACAAAAGAGCACTACCAATTTTTCCTTTATCAATTACTCCGGGCCCTCAAATACATTCATACTGGTAGGAAACATTAACTCCTTCAGCTCTAGTTCCATTTCCCCCTTTTAGATAGTGTGCATCTGTAGTCTGTATATTAGTTACCCCCTTTGATCTCATTTCACAATGCAGCATTCTGTGGTTAGTCTTATATGTATTGCATATTCATTGCATAGAGGGAAGTCACCTACTCATCATGCCCTTCAACCACTCTCCCCATGTGTTTGTGCTTCAGTATAATTATAAAAGAAAGTGAAGTAATGGGGTAGTTATGGCTTCCTCGGTGACCATGTCTAGATAATCTACAGTGAATGTGAGAATATTTTTATTTACCAAAGGTTGCTTGGAGTGCAGTCAATCAAATGCAGATAATAAATCACCATATTTTTGCAAACCAATTTAGCAGCAGGGGCTTTCCCCTTTATGATGTAAAACCAAGTTAACCAATGGGTTTGTGTATGATTTTATAATTTTACCTATTATTAATCTGGTTCCTTGCTTTGTGCTAGCTGGTCCAACCATGATACCTGTCACTATCCCTCTATATTTTAATATGTCCACTTAACATATCCATTTACATATCAGTCTGCGTCCTTTTAGTTTGTTCAAACTAGTAGCTTTCTTTTAGCCCACACGCCTTCTAAAATTACCATGAAAGTAAATTATACTTAATTGTAACAGTCAAGGTATAAGACCTGACTGTAAGTTCATGGAAGCTTTGTGACTTATTTAGCACTCTTGTCATTTTCCTCATTACATTTATGTAGTATCTACTCTGATAAGGACACAGTCTGATTGCTTGAGGGGATTCTTGTCCAATAATTGTCATAGGTATTGACTTGCCACTGGCCACTGCTAAAAACACATCAACCATGCCCTGTTGTTTTTCTACCTTATTGACACCCTGTGTAAAATCTTATGACTCAATTGCATATTATTCTTTTATTTTTCTATTGCCATAATGTGTGCTAACACTGAGTTTATATAACTGTAGCTAGTGTTTATCACCGTGATCTGAAGCCCAAGAACATTTTAGCAAATTCTAACTGCAAACTGAAAATATGTGATTTCGGACTAGCACGAGTTGCATTCAATGATACCCCAACAACTGTCTTCTGGACGGTATGTTAGTACGAAGCACAAACCCAACACCAACTGATTTGGTTGAAGTACCACCATGATTTATGGACATAACACGTATGCTCTGCAGGATTATGTAGCAACAAGATGGTACAGGGCTCCAGAGCTCTGTGGATCCTTCTTCTCAAAGGTGAGCTTTGCAGTTCATGCATATGTTTATCCTGACAGAAATACAATGTGCTTGTTAGACTTGACGATGTCATATTATGTTTTATTTGGTATTTTCTCTTTTATATGTTTTTATAAAGCATATACAATTCATCTTTGTGTTTCTTTGATACTGTTTATCCATTTTTGCTAGATTTATATCCGTTCAATCTTGTTCTGATATCATTTTTTTGTTCTGTTTTGTATTTTAATTCAAGGACTTATTATTATTTCCCATCAATTCCATGTTTTACGCAAATATGGACCAATATCCTGCTGAATAGCAACGTTTACAACAATTCAGGTTACTGTAAAAAAAAAAGCAACTTAGAACAGTACAAGCTTTTTTAAAAAAAATTCACATGCCTGGTGAACTAATGTGCTGCTTTTATGCTTATCATAATTTTTCAAGGGTGTGGTTATATGCAGCATCTTAATGTGTTTTGCATTATCATTTCACTGCAGTATACACCAGCTATTGACATTTGGAGCATTGGGTGCATCTTTGCTGAGGTGTTGACAGGGAAGCCTTTGTTTCCTGGTAAAAATGTTGTCCATCAGTTAGACTTGATGACTGATCTTCTAGGAACACCTTCCATGGATACAATTTCCCGGGTATGATAATACTGTTAGGTAAAAGTTTTTTGTAGGTCCTCCTGGGAGGAGACTTCAGTGACCCCCAACATTTGGCTTATTGTTCTCTTCCTTTCCAGGTTCGGAATGAGAAAGCAAGACGGTACTTGAGCAGCATGAGAAAGAAAGATCCAGTCCCCTTCTCTCAAAAGTTTCCTAATGCAGATCCTTTGGCACTAAAACTCTTGCAACGGTTATTAGCCTTTGATCCAAAGGACCGTCCAACTGCTGAAGAGGTAACTGTTTGGTGTCTTTTGTCACTGTGATAAACTGATATGTCAATTTCTTTTATATGTTAAGATTTTGCTTGCAACTTTAGTTTGGTATGTGAAGTATTTTGTATTGTTGTGGCATTCTCCTGATACTTAAAACTTGTCAGGCATTGACTGATCCATACTTTAAAGGCCTTTCCAAGATTGATAGAGAACCATCATGCCAGCCAATCAGAAAACTGGAGTTTGAATTTGAGCAGAAAAAATTGTCTAAGGAAGATATAAGGGAGCTGATATTCCAGGAGATATTGGAATATCATCCACAATTGCAGAAGAACTACAGAAATGGAACAGAGAGAGCAACCTTTCTCTACCCAAGGTTTTAGCTTTTCTGTATTTGCACACGTATGGTGCTTTTGCACATGCATGTACCATGTATTTATACGTTTCTTTTACTGTATCAAGTCTCATTGACGGTGATAACTTGTCGTCATGATTATACAGTGCGGTTGATCAGTTTAAGAAGCAGTTCTCTAATCTTGAAGAAAGCAATGGAAGTGGCTCAGCAATTCCAATGGAAAGAAAACATGCATCGCTTCCTAGGTAATATGGCATCAAATTCTGATCTCGTGTTTTTTTTTTTGAGGCGTGCTTTGAAGGTCATCTTAAGATTTCTCAATATCAAGGCAACCTTGGTGCCAAATGATGAAAGAAACATCTAGATCAGGCCAGGGGTTCCTTGTCCAGATGGCAAACTGGGTTATATAAAACTTTGGACTGAAGTAACTGGGGCTCACATGAGTTCAAAGAAAACAGCTGCTTTATTCCTGAAGTGTGTCAAAATCTTGTGCATGGTCTTGCACCAAGCACAGGGATGGAGATTTCTCTAGGAATTTGTGGTTCTGTCAATGTTGTAGAGTTGGCGCATATAACTGCTATCTAGATGGCCAAATTCTCCGTTTGACTTGGTATATGATATGATGAAGAAAGGAACTCGCACGTTAGTTAGAGTCATGTTACAAAAGAATTTTGCAGTCTAGATATTTTGACATTAGACGAGAATTGATTAGCATGCATTCATAATGTTATACCCTTTGATTTAGTTAAACCTTGAGTTTTTTTGCTAATCTACATCTACATTTTGTAAGGTCTACTACTGTTCACTCTACTCCAATTCCTCCCAAGGAACAACCTCTTGCGGCCTCATTGAAGAGCAGCAGGCCTGTCTCTGATGAACCTTGTAAAAACCCCTGGGTCATGGGAGGATTTTCTGGAAATATTCCCACTTCTTCTCAGGTTTCACAAGTGGCAAAACCAGGTGCACTTGTGTTTCATTTATTAATACTAGTATATCTACATGTTCTGTTTATATTTCTAATATATTTCCTTCTTAACAGTGGCACCAGGGAGACCTGTTGGGTCAGTATTTCCTTATGAGACTGGAAGCACCAATGATCCTTATGGTCCAAGGGGACCAGTGATGAGTTCAGGGTATCCTCCCCAGCAACAAATCTCACAAGCATATGGTTATCATCAAGTGCCTGCAAGGATGAACTGTGTTGAACAATCACAAGCCATGGATGCTTATAAAATGCATTCACAGTCACAGACGCAGGCCTATGCTTATCCGAACAGCAAAGTCACGGCTGATGTTGCTCTGGACATGAGAGGATCCACGTTCCATCATTCAGCAGGATCAAAGAACGGCTCGTTAGATAGAATGGTAACACAGACTGACATATACACAAGATCTCTTAACGGTATTGTTGCTGCCGCGACTTCGGCAGGCGTTGGTACTAACAGAAAGGTTGGTGCTGTACCCATCAGCACCTCAAGGATGTATTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020440

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020440&oldid=49196"