BGIOSGA020486

From RiceWiki
Revision as of 03:10, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020486| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020486, complete gene.| tag = OSUGE-1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020486

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020486, complete gene.

LocusTag

OSUGE-1

Ensembl Transcript ID

BGIOSGA020486-TA

Ensembl Protein ID

BGIOSGA020486-PA

Length

3375

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:30972680..30976054

Sequence Coding Region

30972680..30972874,30973605..30973654,30974208..30974343,30974844..30974945,30975066..30975293
,30975373..30975457,30975561..30975643,30975767..30975858,30975961..30976054

Genome Context

<gbrowseImage1> name=IndicaChromosome05:30972680..30976054 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:30972680..30976054 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTTCGGCCTTGTTGCGGACGATCCTGGTGACGGGCGGCGCCGGCTACATCGGCAGCCACACCGTCCTCCAGCTTCTCCAACTCGGCTTCCGCGTTGTCGTCCTCGACAACCTCGACAACGCCTCCGAGCTCGCCATCCTCCGCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGGTTTGAGGCTGTCATCCATTTTGCCGGGCTGAAAGCTGTTGGCGAGAGCGTGCAGAAGCCCCTGCTTTACTACGACAACAACCTCATCGGCACCATCACTCTCCTGCAGGTCATGGCCGCACATGGCTGCACCAAGCTGGTGTTCTCATCATCCGCAACTGTCTACGGGTGGCCCAAGGAGGTGCCCTGCACTGAAGAATCCCCACTTTGTGCAATGAACCCCTACGGCAGAACAAAGCTGGTAATCGAAGACATGTGCCGGGATCTGCATGCCTCAGACCCAAACTGGAAGATCATACTGCTCCGATACTTCAACCCTGTTGGAGCTCACCCAAGCGGGTACATTGGTGAGGACCCCTGCGGCATCCCAAACAACCTCATGCCCTTCGTCCAGCAGGTCGCTGTTGGCAGGAGGCCGGCCCTTACCGTCTATGGAACCGACTACAACACCAAGGATGGAACTGGGGTTCGTGACTATATCCATGTTGTTGATCTAGCGGATGGTCATATCGCCGCGTTAAGGAAGCTCTATGAAGATTCTGATAGAATAGGATGTGAGGTGTACAATCTGGGCACTGGAAAGGGGACATCTGTGCTGGAAATGGTTGCAGCATTCGAGAAAGCTTCTGGAAAGAAAATCCCGCTTGTATTTGCTGGACGAAGGCCTGGAGATGCCGAGATCGTTTACGCTCAAACTGCCAAAGCTGAGAAGGAACTGAAATGGAAGGCAAAATACGGGGTAGAGGAGATGTGCAGGGACCTGTGGAATTGGGCGAGCAAGAACCCCTACGGGTATGGATCGCCGGACAGTAGCAACTGA</cdnaseq>

Protein Sequence

<aaseq>MVSALLRTILVTGGAGYIGSHTVLQLLQLGFRVVVLDNLDNASELAILRVRELAGHNANNLDFRKVDLRDKQALDQIFSSQRFEAVIHFAGLKAVGESVQKPLLYYDNNLIGTITLLQVMAAHGCTKLVFSSSATVYGWPKEVPCTEESPLCAMNPYGRTKLVIEDMCRDLHASDPNWKIILLRYFNPVGAHPSGYIGEDPCGIPNNLMPFVQQVAVGRRPALTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWKAKYGVEEMCRDLWNWASKNPYGYGSPDSSN</aaseq>

Gene Sequence

<dnaseqindica>1..195#926..975#1529..1664#2165..2266#2387..2614#2694..2778#2882..2964#3088..3179#3282..3375#ATGGTTTCGGCCTTGTTGCGGACGATCCTGGTGACGGGCGGCGCCGGCTACATCGGCAGCCACACCGTCCTCCAGCTTCTCCAACTCGGCTTCCGCGTTGTCGTCCTCGACAACCTCGACAACGCCTCCGAGCTCGCCATCCTCCGCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGGTCTTCCTTCCTTCCTTCCTTCCTTACTTAATTCTCTCTCTCTCTCTCTCTACATTAGATTCTGATTTTGCGGTTCCTTTTATTAATTTAACAAAACAAAACAACCATTCCCATCTCGATAAGCGGCGCGCGGCGATATATCATAACTTGTCTTTTTGATTAGATTGAAATGAAATCAATTGGATTGGATTAATCATCTCATCTAGTCAACATATTACTAGTTACTTATATCTGTATTCGGGCGACACAAATCCAAATAGTAACTACTCCTCTTCCTCCTTAGTAATGGAAAGTTAGAGTTCCTACAAATATTTTTGTTTGAATTGGAGTTGTAGTCGTTCGTTTTCATGGGGAGGCGGTCAATTGAATTGAATTGAATTGAGTTGGTGGAGTAGTAGTGGAAATGGGAAAAAAAAACCCAAGGAGGGAGGGAGGGAGGCGTTGGAAGGCGCCGGACGCGTTGTTCCCGCCCCCCTGCTTCATTTCTGTTTTGATTTTTCATGGCCAAGCACACAACGCATGCACCACCCACCCCACATACGTTCCTTCTACTTTCTTTCCACCCATATATAAAAAGATCCTTTACAATCCACATCTCAATCTCAAATATAAATAGGATTATTAATACTAATAAGCTCATTCCCCTGGTGCATTGCATACTCATAAAATTTCTTGCTTAAAGGACTCAAAATCTATCTTAGACTAATATAACATATAAATTATTATGCAGGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGGTTGGTTAGTCTTCCTTGCTCCTTCAATTTGCACTTAAGTACCTACCTTTAATTTGTTTTCATTTTTGGTTAGCAGCGTGACACCGTAAATTTCAGCATAATATATATACAAACTATAGCTATTAAACTATTTCAGCATAATTTCATCGGTCGGTCGGTCGGTCGGTCGTTTATTCCATGAATCAAATCAAATCGATCATTGTCAAAATAATTACTCCTCATCATGTATTACAAGTATTCTGGACCTAGCTAGCTGCTCAGCCAGCCTGCCAGGTCAAGAATCTGGTGCTTGGCCAGTTTAATTTGCAGCCGTCTATCACGCACGGTAGCTGTCACGCTCATAGTACCAACCAACGAACCGAACCTTCCTTGTGGAATTAATGCATTACTATATATCACAGGTGACAGTCCATCCCTTTTGTACCCAACCGCGTAGTATACTGGAGTACTAATAAGCAATACTATGATGAATGAAATGAAGAGTAGTAGTAGGTATTATTATCTGTTTTGGCGAAGATTTGAGACGGACGGACGCTGGTCTGCTTGGCTGCAGGTTTGAGGCTGTCATCCATTTTGCCGGGCTGAAAGCTGTTGGCGAGAGCGTGCAGAAGCCCCTGCTTTACTACGACAACAACCTCATCGGCACCATCACTCTCCTGCAGGTCATGGCCGCACATGGCTGCACCAAGGTACAGCCCCCGCACCATTTCATTTATTTTTCTCCCATTGTTTTGCTTTGCCTATATGTATATGCGTGCCTCTTGCTGGCTTTATTGGTTGGCTGGCCTGGCTCTTCTTTGCATTGCTGGGGGTCACAGGATATACCTTATGCCTTTTTGCATTGCTGGGGAACACAGGAACATATACCACAGATTACCTACCTATCACAACCACTCTGTGTCTGTGTGTGTTGTTTGCCATGCATGATGCACGGGAATATAACCCTCCCCTCTTAAAATTGCTGCCTGCCTGGTCCCACTCCCAGCCAAGATTTTTTTTTTTGTTCTCTTCCTACTGCCCTCTGATTTTTCTTCTTCCTTTCATCTTGTTTTGGTTGGTTGGTTGGTTCTGAGCTTACTCTGGAGGCGGCATCGCAACAGATTTATACTTACTTAATCCACTAAAAGTAAACATATATGCTTTAGTTTTTAATAATGGACATAATCATAAGCTATTTTGCTCCGGCCAGCTGGTGTTCTCATCATCCGCAACTGTCTACGGGTGGCCCAAGGAGGTGCCCTGCACTGAAGAATCCCCACTTTGTGCAATGAACCCCTACGGCAGAACAAAGGTACTCCAGTTTTTTCTCTTCTGTTATACTATATTCAGTTCAATCATCATGCCTAGGATCAATCAATCAATAAATCCTAATTAAGCCAAACAACATATATATGATATGATATGATTGCAGCTGGTAATCGAAGACATGTGCCGGGATCTGCATGCCTCAGACCCAAACTGGAAGATCATACTGCTCCGATACTTCAACCCTGTTGGAGCTCACCCAAGCGGGTACATTGGTGAGGACCCCTGCGGCATCCCAAACAACCTCATGCCCTTCGTCCAGCAGGTCGCTGTTGGCAGGAGGCCGGCCCTTACCGTCTATGGAACCGACTACAACACCAAGGATGGAACTGGGGTATGTATATGCATTATTCATTCATTCTCAACAATCAGTCGTATATGATTTACTAATTAATTTTATTCCTTGCCGGCAGGTTCGTGACTATATCCATGTTGTTGATCTAGCGGATGGTCATATCGCCGCGTTAAGGAAGCTCTATGAAGATTCTGATAGAATAGGTATATATGAACCCTCTCTTGTTGTGCATCCATCCACGGGACGGGACACATGAAAACATCATCATCTCATAAATTAATAATTTATGTGGCTATATTCTTCCAGGATGTGAGGTGTACAATCTGGGCACTGGAAAGGGGACATCTGTGCTGGAAATGGTTGCAGCATTCGAGAAAGCTTCTGGAAAGGTAAACTAACAGGACAAGTGTACTTCCTCTTAATTACTATAATAATCATTAATTCCCAACTTGTCCTTTGCTTTTGTTGATCATATGATGTCGTCCTAACAATAATAATGCCAACTTGAACAGAAAATCCCGCTTGTATTTGCTGGACGAAGGCCTGGAGATGCCGAGATCGTTTACGCTCAAACTGCCAAAGCTGAGAAGGAACTGAAATGGAAGTAAGTATCAGGATATATATATATATATAGCATCTCACATCATTTCATCTGTACTGTAATGAAATGAAATATTAAAATCATCATGTACTCTCTTCACACCAGGGCAAAATACGGGGTAGAGGAGATGTGCAGGGACCTGTGGAATTGGGCGAGCAAGAACCCCTACGGGTATGGATCGCCGGACAGTAGCAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020486