BGIOSGA020620

From RiceWiki
Revision as of 12:49, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020620| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020620, complete gene.| tag = P0550B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020620

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020620, complete gene.

LocusTag

P0550B04.15

Ensembl Transcript ID

BGIOSGA020620-TA

Ensembl Protein ID

BGIOSGA020620-PA

Length

3330

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30909062..30912391

Sequence Coding Region

30912269..30912391,30912054..30912185,30911863..30911960,30911737..30911778,30911563..30911640
,30910364..30910442,30909766..30910269,30909407..30909489,30909062..30909146

Genome Context

<gbrowseImage1> name=IndicaChromosome06:30909062..30912391 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:30909062..30912391 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGGCCGCGTCCTACTTCTCCGGCACGGCGCTCATGCCATCGCAGCGCAGCGGGGCTCCCGCGCCGGAGTACTCCGCCGCCGGCACCGGCGCCGCCGCCGCTCCTTCCCCTTCCAAGCCGCGCGACCCCCGCTTCTCCGGATGCGTCCCCGCCACCGTGCTCCACATTTCCCGGTCCTTCGCCGCCGCGCTCGCCGCGGACGGTGGGGGCGACCCCGTCTTCTCCATCGACGGCGTCGAGACCACCAACGTTAGGGTTTTGGGGAGGGTGGTGAGCGTGGTGAGCAGGGATACTGACGTGTGCTTCACTCTCGATGACAGCACCGGGAAGATCCCACTCGTTCGGTGGATCACTGATCAGTCGGATACTCGAGACACGTCTTACATTCAGGAGGGAGTGTATGTGAAGGTTCAAGTGAACCTCATGGGATTTCAAGCTAAGAAGCAGGGTCTTGCTCGATCTATCAGGCCTATTAACAATTTCAACGAAGTGGTGCTACATTTCATTGAGTGTATGCATGTGCATTTGGAAAGTGTTCAATCGAAGATGCAAAGGCAACTCCCTCCTTCAGTCCAAACCAATGAATACACTCATGTGCCCTCATCTGGTGGAGTGAGGGATTACCAAGTTCATTTCACTCCTCAAGTAAACCAAGGACTACCCCCTGCAGTTCAAACAAATACATCTACTTATGTGCCTCTTTTGGGTGGAGTTAGAGATCATCAAGCTCATTTTGCTCAAGTAAACCAAGGGCAGTTTTCTCCGGCAGTTCAAGCAAACACATCTACCCATTTGCCTTTTTCTGGTGGAGTTGGAGAACATCAAATTCATTTTACTCCTAAAGTAAACCAAGGGCAATTTCCTCCATCAGTTCAAACAAACACATCTGCTCATGTGCCTTATTCTGGTGGATTTAGAGAACATCAAGTTCATTTTACACCTCCTGTAAACCAAGGGCAATTTCCTCCAGCAGTTCAAACAAACCTGTATAATCATGCGGCTTCTTCTGGTGGAGTGAGAGAACAAGTTCATCTTACTCAAGCAAACCAATTTTCAGCTTACTCAAGCACTGGTGGACTACAGCATGACCCACAAAGAATGGTTTTGGAAGCTCTGCAGCAACCAGATATAATGGGGGTTGTCAAGCATCTGGCTGCAGCAGGCTTTGTCTATTGGACCATTGATGACAATCATGTCAAGTCTATGTGTAATGGTTGA</cdnaseq>

Protein Sequence

<aaseq>MAAAASYFSGTALMPSQRSGAPAPEYSAAGTGAAAAPSPSKPRDPRFSGCVPATVLHISRSFAAALAADGGGDPVFSIDGVETTNVRVLGRVVSVVSRDTDVCFTLDDSTGKIPLVRWITDQSDTRDTSYIQEGVYVKVQVNLMGFQAKKQGLARSIRPINNFNEVVLHFIECMHVHLESVQSKMQRQLPPSVQTNEYTHVPSSGGVRDYQVHFTPQVNQGLPPAVQTNTSTYVPLLGGVRDHQAHFAQVNQGQFSPAVQANTSTHLPFSGGVGEHQIHFTPKVNQGQFPPSVQTNTSAHVPYSGGFREHQVHFTPPVNQGQFPPAVQTNLYNHAASSGGVREQVHLTQANQFSAYSSTGGLQHDPQRMVLEALQQPDIMGVVKHLAAAGFVYWTIDDNHVKSMCNG</aaseq>

Gene Sequence

<dnaseqindica>1..123#207..338#432..529#614..655#752..829#1950..2028#2123..2626#2903..2985#3246..3330#ATGGCCGCGGCCGCGTCCTACTTCTCCGGCACGGCGCTCATGCCATCGCAGCGCAGCGGGGCTCCCGCGCCGGAGTACTCCGCCGCCGGCACCGGCGCCGCCGCCGCTCCTTCCCCTTCCAAGGTTCGTGATCTTCCGTTTCGTCGTAACCCTATCTCCGTCTCGTTCTCCCCCGAACCCTAACGCCGTCGAGGTTTCCTTGTCAGCCGCGCGACCCCCGCTTCTCCGGATGCGTCCCCGCCACCGTGCTCCACATTTCCCGGTCCTTCGCCGCCGCGCTCGCCGCGGACGGTGGGGGCGACCCCGTCTTCTCCATCGACGGCGTCGAGACCACCAACGTAGGCTACTCGGCACCTCCACAGCTTCCCTCAATTTATTTTCCGTGGTCCCGCGTAATCTGTTTTTTTTTTGGGTGCCGTTGATGGTTTTAGGTTAGGGTTTTGGGGAGGGTGGTGAGCGTGGTGAGCAGGGATACTGACGTGTGCTTCACTCTCGATGACAGCACCGGGAAGATCCCACTCGTTCGGTGGTGAGTTGCAATTTTGTTTCCCCTTTCGCATTGAATGCTGTTGCGATGCAGTACATGTGACATTTTTTTTTTCTGGGATTGTAGGATCACTGATCAGTCGGATACTCGAGACACGTCTTACATTCAGTATGTGATGTGTATTAGTGTATAGGCTCTGAGATGTGCTTATTTTAGTTTCAGCGATTTTATATTCTGTTATTTATATTTCCTGTACATATGAAGGGAGGGAGTGTATGTGAAGGTTCAAGTGAACCTCATGGGATTTCAAGCTAAGAAGCAGGGTCTTGCTCGATCTATCAGGTAAGGTACTTGAATTCCTTTTGTATTGATGTGGTGGTACTCTGTTAATTCACCTAGAAAGCTTCTGCTCATTTGAATGAAGTACTACTATGTTTTTTAAAAGTTTTACCTCTGAAATTCATAGTTCTACTGGAGTTACATTAATTTTCAATAGCAATTATGCACGCTCTGAAGTTTGCATACAATGCTGGCAATCTTTGTTGTGCACTTGCACCCAAATGTCTTGGCCGTTTGCTTTGTTTGAAGATCATGGGCTCACAAAGTATTATTTTGTGGATAATACTTGAACTCTGTTCTTACAGTAAGTTTTCTTGAAATATATTATATCATTTGAATGGAGTGCTAATCTTGGATGACCTGATTAGATACATGGTGGATGCAAATTTAGAAGTGTTTTGAAGAAAGTATGGGGATGTTTGAGATAAAGGTTTTATTGTATGTGTAGCGGCTATCTTTCGTTTTCTTTTCTTTTTGTATGTTTGTGTGTGTGTTTGATTCTTAACACTATCCTCTTTCAGAGTAGTTTTCTCTGTTCATCTAAGTTCAACCTGGGTATGTCTTTTGGAACTTGTTGCTGATTTTTTTTCAGATAGTACCATCATTAGCTGTTCTAATTTATTAGATCTTTGCATAAAATGTGCTGATTTTTCCTTCGTTGCACACTACCTTTTTCTTCTATTTCTTCACCTCAGGTGTTTTGGAACCTTTTCTTTAACTTGTTCAGTTGGTGGACATGTTAAATCTGTTGCACTGTTATTGATTGATGTGTATTGTATGTACTTCCTTAATTGCACTCTTTTTTGTCATGTATTGCATAACCATGTTGCTATCGTGTATCTGTATTCTATCTCTGTTATACCTTTTCTGAAGTGTACTGTTGGATGAACTACTGATCCTACGAACAAGCTGGAAACTGAATTAATCAATCCTTGCTTCGCTGACTTAATTCAGTACATTTCTAATACAAGTGAAGTCAATGGTCTGTAGAAATACTAGCTCACTATTGTAGTGTTAGTTTATGAGTACTTGAGGAAACTATATATATTTGCTCATTTCTCTGTTATTTACTAAGAGTACTTCTATTCTATTAAGCTTCAAATTGTGATTCGTGTATTTGCAGGCCTATTAACAATTTCAACGAAGTGGTGCTACATTTCATTGAGTGTATGCATGTGCATTTGGAAAGTGTTCAATCGAAGGTACATAAAGCAAGTAATTCAATATTATGGCAATTCTATTACTAATTTGACAATGCTAGAAGTCATTAATGATCGCTACCTTTCCATTTTGAAGATGCAAAGGCAACTCCCTCCTTCAGTCCAAACCAATGAATACACTCATGTGCCCTCATCTGGTGGAGTGAGGGATTACCAAGTTCATTTCACTCCTCAAGTAAACCAAGGACTACCCCCTGCAGTTCAAACAAATACATCTACTTATGTGCCTCTTTTGGGTGGAGTTAGAGATCATCAAGCTCATTTTGCTCAAGTAAACCAAGGGCAGTTTTCTCCGGCAGTTCAAGCAAACACATCTACCCATTTGCCTTTTTCTGGTGGAGTTGGAGAACATCAAATTCATTTTACTCCTAAAGTAAACCAAGGGCAATTTCCTCCATCAGTTCAAACAAACACATCTGCTCATGTGCCTTATTCTGGTGGATTTAGAGAACATCAAGTTCATTTTACACCTCCTGTAAACCAAGGGCAATTTCCTCCAGCAGTTCAAACAAACCTGTATAATCATGCGGCTTCTTCTGGTGGAGTGAGAGAACAAGTTCATCTTACTCAAGCAAACCAAGTATGAAATTTTACATATCGTTTTGAGAATTGCTTGCTTATAAAAAATATAACATATTAATAGTATATGATTTAGTTGGTATATCTGAGAACTGAGATTTGGTTTTATTTGATAATTTGTGTCAGTATTATGGAATTGAGATTTTTATTGCCTTTTCCCTAGCATAGTTTTTAGTGCCTTCCGTTTAATTCACCAACATGCATTCTTTAAGGCCCTCTTTCTTGTTACATGTTCACTCTTACCTGATCTTGTTAGATCTTTTATTTCCCGGCCCAGTTTTCAGCTTACTCAAGCACTGGTGGACTACAGCATGACCCACAAAGAATGGTTTTGGAAGCTCTGCAGCAACCAGATATAATGTAAGTGTATTGTCTTAGGCACTGTTAACCGATGATAGCTTATTTTGGATATTTGGACTGACTTTTTATTTCCACAGTGCTCTCGAACATGGAGCACACGTTGATGAATTGGTTAGAAGAACTGGAATGCCCAAAGCAAACATTATGTACTCTCTCTCTCTCTCTCTCTCTTATGTATATTTTTTTTTCTTGTGTGTTACTAGTATTATTATTTTTTAATTGCACATGAATGATGATAAGCTCGACTGTTTACAATGCAGGGGGGTTGTCAAGCATCTGGCTGCAGCAGGCTTTGTCTATTGGACCATTGATGACAATCATGTCAAGTCTATGTGTAATGGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020620