BGIOSGA020694

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Revision as of 12:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020694| Description = cDNA, clone: J065035I15, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA020694, complete gene.| ...")
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Gene Name

BGIOSGA020694

Description

cDNA, clone: J065035I15, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA020694, complete gene.

LocusTag

OS06G0674100

Ensembl Transcript ID

BGIOSGA020694-TA

Ensembl Protein ID

BGIOSGA020694-PA

Length

9239

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29694923..29704161

Sequence Coding Region

29704040..29704161,29698066..29698123,29697835..29697963,29694923..29695150

Genome Context

<gbrowseImage1> name=IndicaChromosome06:29694923..29704161 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:29694923..29704161 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGATGGGCATGCACGCTTCCCTCTCCTCAAGATTCACCGGCGAGCTTGGCATACAGAGTGAGGGTGGCGAGCTCAGCAAGGAGAGGTGGAGGAGAGATGATGATGATCTCACTGACAGGAAGAAAACCGAGAGGATCGAAGGGATAGAACTCCACGACCTGATCAATCGATCGAAGATGGTCGAGGGCCTCGAGGCGGCGAAGGACGTGGTGGACTTGGAGAAGGCGATCGACATCATCGATGCTGCTGCTGTTGTTGAGGCAATAGCTGGAGAAGAAAAGGTTCCTGCAGATCTGCAAGTGCAGGTGCAACGCGATGCCAGTAAGCTGAATAATCAGCATGCCCGGAAGAAGTACTGGCTGCTGCTGTGGTTCCTGATCGTTGTTTGGGTGATGATTCTGACAGATCATTTCTTCGACGTCGACGGAGACCAACAAAAAGATCATGCCGAATCCGACAGCCCGCATTCCACGCTCGCCAAGTTCATCGGCTTCCTGAGTGTCATCTGCCTCATGTTTCGCGCCCTTGATTAA</cdnaseq>

Protein Sequence

<aaseq>MVMGMHASLSSRFTGELGIQSEGGELSKERWRRDDDDLTDRKKTERIEGIELHDLINRSKMVEGLEAAKDVVDLEKAIDIIDAAAVVEAIAGEEKVPADLQVQVQRDASKLNNQHARKKYWLLLWFLIVVWVMILTDHFFDVDGDQQKDHAESDSPHSTLAKFIGFLSVICLMFRALD</aaseq>

Gene Sequence

<dnaseqindica>1..122#6039..6096#6199..6327#9012..9239#ATGGTGATGGGCATGCACGCTTCCCTCTCCTCAAGATTCACCGGCGAGCTTGGCATACAGAGTGAGGGTGGCGAGCTCAGCAAGGAGAGGTGGAGGAGAGATGATGATGATCTCACTGACAGGTGGGGCTCACCAAGTTTTTACTGGTCCGATTACAATACACTAGTACAGATCTTTCTATCTGTGATGGGCTCTAATATGCTTAGAAATAGCGGGCCGTCACAAGGAAGTCATCTCAATCGGGCCGAAAAGTGCCCGATTGAGATATGGACGCACAGACATGTTAGATGGGTATAAAACTTAAGCCCGTCACGGATGATACCTATCAGTGACGGGCCACAACTTTAGTGCCCGATTGAGATAACATTCCATATCTCAAACGGGCCTTAAGTTGTGGCCCATCACAGATTGATGGTCATCTGTGACGAGCCACAACTTTAGGTCCGTGTGAGATACCATGCCATATCTCAAACGGGCCTCAAGTTGTGGCCGTCACAAATGACCATCATCTGTGACGTACACCAACTTGAGGCCCGTTGAGATAACAACTAGGCCCGTCACAGATGACTCATCAATGACGAGCTATATACTTAATCTCTATCGGGCATTAACTAAAGCCCGTCACCGATGACTATTTTTCCATTTTTCATATGAAATGTTTATATTTGTAAGTTGACTATAGCAAAATAATTTTACGGGTAGTAAATGATTTCAAATGGAAAAAATGTCAACAACAAAGTTGTATAACTTATCAATATTTACAACTTTTAGTTTGGTCATTTTTCAATATAACTTTTTTTTAAACAGTTTGAATTTGAATTTAAAAATATGACAACTTCAAACAACATTTTCAAATACTAAATGATTTCAATTGAAAAAGTCATCAACAACAAAGTTGAATAACTCATCAAGATCTAAAACTTTTATTTTTGTTAATTCTGTGTAATATATACACAGATTATCCGTCTGTACATAACCACTGCCAATTGGCCAGTGAAGAGCGAGTGTTGTTTTCATATAATTTTGGTCTCCATCTCGACTTGTACGCACCACATTTAAGAATTACTAATCGACAGGTGGTGACCTAACATGGCAGCAAACACCACTCACTGTAGATCGGAGCATTTGATTGGTGCGAGGCTTCAAACCGATCGAACTGGAACACTCACCACGGGCCGCATGTACCTTAAAACCACCACTCCATGGCTTCCGAGGTCAACTACTCGTCATGCCGCCGAGCTCTCTCGCCTCAGCCGCCGCCGCCGGGCGCCGGCGGCTGCAGAGCAGACATGAGACCTCCGCGGCGCCGCCCAGCTGGGCCAACGACATAAGCAGATAAGTACGTTTTTGCAGTTTCCTGTGAGTATGGTCTATATTATGCTTGTTAATAAGCTATTGTCCCCTCTTTTTCTTACTTCCTTTGGAAACAAATTAAAAAGAGGTCGGCTAACGTTTCGTTGTGCATGAGTCCATCTGTGCTTCATTCTTGTCTATATGCATAGCTGCGGGCCGGGCTGCCTATATACATGATCTGACAAACATGCATCTCATGTTAAAATGAAAAAAAAAAGTAAAGTCCATCACCGATCCTTGTACCGTTATGTTATCCCGGTCCCTAAACTCGCAAATCGACCGTTCAGGTCCTCAAACTTGTTCGACTGTGTCATCCCGGTCCCTAAACTTGCAGATTACTCGTTTAGGTCCTCCAACTTGTTCAGTTGTGTCACCCCGGTCTCTAAACAGGACGGTCTAAAAACTTTATATAAAAAATATTTTATAACTTTTTCATGTGAACTCTAATGAAGACAAATTTTATATCAAAATTGTAGCCCTCGATGCGACCTACAACTTTGTAGTTGAAAAGTTTTTGAATTAAAACTGTTTAGGGTCCCAAAATATTGTTGATGTTTATAGATTTTGAAATTTTAATTTTAAAATTACATTTTGGGACAAAAACTGACTTCAAATAAAAAAAATTCAACTACAAAGTTGTAGATCGCGTCGAGGGCTACAAGTTTGATATAAAACTTGTCTTCATTAGAGTTCACATGGAAAAGTTATGAATTATTTTTAAATATAAAGTCTTTAGACCGTCCTATTTGACCCAGATGATATTCAAATTCAAGTTTAGGGACCGGTGTGACACAATTGAACAAGTTGAAAGAGCTAAACGAGTGATCTGCAAGTTTAGAGACCGATGATGGACTTTACTTAAAAAAAATACAGTATGTATGATAGATTGATAGTAAGTATATGGAAATTAACGCCATCACATCAGGATGAAAAGTGTAGAAAAAAACGACTAGTATTTCGGGGTCAGGAATCAGAACTCACAGGGAAGAAAAGTGAAGATGAGAGAGCCTTTAGATGTGTGTTTGACACAATTATTCAAATCACCTAGCCCCTTTGGATTTTTTTTTACATTTTCATTAATTTTTTTACGAAAATATTTGTAAATTTTCATGTACAATTTTTAAATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACATTAGCACGGGCAATTACTAGTGAATGTACTCCTGTTACATGAGAAATGATTACCAAATTTTGAATGGTAAATAAGATCATGTTCATGGAAATGATCAGCCAAATTTTACGCATCTAACACTAGAACGGATACCATCATCTCAATCGGGCGGCAACCCCCATCTCAATCGGGCATGGCGTCCGTCACAGGCTAGAAGTCATTGATGTGAAAAGTTATCTCAATCGGGCAAACGGCCGTCACAGATGAACCTATATCAATCGGTCCATAATTAAAGCCCGTCACCGATAGCTTTAACCCAGACGATCAGTCAAACTATAGCCCGTCACGGATGACCTATCTCAATCGGGCCTAAACTACAGCCCGTCACAGATGACCATTATCTGTGACGGGCATTAACTATAGCCCGTCACAGATGAGTCATCTCAATCGGGCCTAAGTTAATGCCCGTCACAGATGAGTATAATCCCAAAAAAAAATTATTTTTAGGCATGTCGTCCAACCTCTCTCACGCCAGTCTTTTTTGTCCTTACTCGTGTGCACCTGGGATAAGGTTCCCGATTGGTCACCTATCCCGAAATTGCTACAAGCCAAGCACGCTTAACATCAAATCAAAGTTTTTTGGAGATCGGCATCCGAAAGAGTAGTTGTAACTTATTGATGTGAGTATTCTATTAATCCTATTAAGCCCTTGGCCAGGATGTCACACCCCAACATCTCTCATTCATATACATTCATTCACATACACAATCATCAAAAATCCTAAACAACAAAATTGTATAACTCACTGAGATCTACAACTATTGTATCGGTCCTTTCTATACATAAGTTTATTTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGCAAACCTTCCGCAGTAGAACGAACCGCGCCTCCATGGCGCCGTCCACAGCGATCTTGGGTCTCCGGTTAGGCGCAATCGCCCTACGCCGGCACCGGAGGGCTTTCGCTGATTCAGAACCAGCCTCGAAGGGGATGGTGTGGTAGAACCACCTCGCCATCCAATGGCGGTCCCACTTCGACATGGCAGCGTTCACCGGCCAGAGATCGGATCGCTCGGGGCGAACGTTGAAGTTCACGCTCCCGAACACTGTTTTTTTCGTTCCAGCTGGGGTAATCACCGTCTTCGAGTTCACGGTGGCGAAAAATATGGCGCCAAAGAGCTCGGCGTTGGGCTCAAACCCAGAAGTCCGACACGCCCAGCCGAAGATAGCGATCCGAACAAGCGTCGACGTGCTCAGCTGCGGAAGTTCCACCTGGAAGAGGCGAAGGATCTCCGGCAACAATACGTTGCAGGGAAACCGTAACCCTGCCTCAAAAAATACGGCGAACACCACCGTCCGATTGTCGACAGGTTTCGGCACCACGGTTTTCCCTGGGGCGGAAGCCTGCCCCTCAACCAACGCTCCGGAGCTGACCAGCTTCGCCAGCTCGACGTCGTCCACAAGAGAGACCCCCAGAAAGGCGGTGCTGTCGTTATCGACTCGGCCGGAATCTGGCCCTTTTGCTAAAGTAGGGTTTGGCTTACGTGGGGCCATGGCGAACGGTGCGTTTGCGGTGGCGAAAAAAGAGATTCGGCGAAACGCCTGAGGGATCGAAAGATGCTGTGAAAGGAAGAGACGGAGAAAGAGAGCACGCGCGGTAAAATGGAAAGTGTGGCGGTGAAAAGGAAAGAGCAACGGGAATATATAGCCCGCCCAGGCGACCGTTCGCCTACCCACCAGTAATGAAGCGCCACGTGTCGCAAGGGTAGGAGAAACGGTAAATTCCCATCGACTGAGCGGCACAGTAAAAAGCCCAAGATAGGAAGGCCCAATACTGTTCCGTTCGGCCCAGGAAAAAAGAATATATATAACCATCAATCGCACGAGGCGAAGCGCGGCAAAATAATACCAGTCGCACAAATAACAAACTTCATTCGCAGGAATAATGTAGGTTTCAGCAGGAGCATCGGTCGAAAGGGGGCGCCGCATACCATACCACATGGTTTGCATGGTCTCGGCCGAAGCTCCAATCTCACCCTTGCCCGTGAGGGGCTTGTTGGCGGATGGCACGAGGCCCTTCAACCAAACCTGCCGAAACCCATGGCGAAGGCTATGGAACAAGAACGGCGCAAGACGAAGACTGTCTGCCGAAGGAGGATGACTTCGCCTTGACAAAGTTCGCCCTCGCGAGGGCCGAGGAACCAGGCCAGAGGCGTCTCAGGCGAAGGGTGCAAGGCGAAGACTGTCTGCCGAAGAAGGATGACTTCGCCTTGACAAGTTCGCCCCCGCGAGGGTCGAGGAAGCCTTTCCGGCCCATCAGGCCGGCGATCGTCAGACGGCCCATCAGGGGCCCATGAGCCCCTATAACATTATGTACCCCTGTAAATGTCCCTTTTGTAAGGGTAATCATGTAAATTCCCCTGTACAACCTAAACCCTGGTAGTAAGAACCTGTAATGGGACTATAAATAGTCCCCTAGGGCCATGTAATGGGGGGATGAAAAAAGTGAAAATTCAGAATTTAGTACACTTCGTTTTTCCAACAACTGTTGAGTAATCACGTCTTTCGACGTATGCGGTTGTCGTTTCGACAATATATATATATACACACACACGTGTTGGCTCTCAGTCTCGTAGATACTCTGAAAATAGTATACTAATTTTTACAGTTTTTTTTTAATATATCAGAGTGGATAGACTAATCGTTAGCAATCTTGGGCAGCTCAGTTTTATGTCTTGTGATTTGGCGAAGCTTTTATTTTCAACGAAAGAGAGATGCATGTTCTGATGTCCTCCCTCTGTCTAAAAAATATCTCACATTATTTAGATACATTTTTAGTATTTGGATTTTTTTTAACAGACGAGTACGTAGAAACAACAAAAACGATCGAGCTAGCAGACAATATAGGAGTACGTGTTAACGTGCCATGGTGCAATTAATAACGATTAGTGTGCTTGCACACAGTGTCGTCATCTCTTAAAACCAATAACGCGTCGTCGTTGGTTGGTGGTCAAGGAGCTACGCAAGAGTAATCTCCTTCCTTTGCTTCTCCTTCTCTCTCTCTTCCTCTTCCTCTCTCTCTCGATCGGTTTCTCCCTCTTTTTCTTTGTCTCTCGCACAGACCAAAAGCAAACGCACCGCCTCTCGAATCGCGATTCTCCCTTTCCGTGCGTGTCATGGTTCGGATCAGGGTAGCTTTGATGCTCTTCTCCCCTCCTTAGCTACATCTAGCTAGCTCTAGCTAATTAAGCTATTGCCTTAAGCTAGCTAGATCCAGAAATCTGACCTAATTAATATCCGATCAGTAAGCAGCTGGTTCGTCGATATATACCTGCATCCGTTCGTTCAGGTAAGCTAGATAACCATGTGTAAAATATTTTCTTCTATTAGCTCAAGCGCTTCTGAGTTCTGAACTTTTGATTGCTAATTTTCTGATTTTCTCTTTGATCCTTTACTTTTCCTCGTCTGCAGGAAGAAAACCGAGAGGATCGAAGGGATAGAACTCCACGACCTGATCAATCGATCGAAGGTATCTGAGCTCATCATGGCTAGATAGCTAGCTACCCCTCCTCAATCCCATGCCATTTCAACTAGGTAACCTCCATTAATTTCTTTTTTCTGATGATCTGAGATGGTCGAGGGCCTCGAGGCGGCGAAGGACGTGGTGGACTTGGAGAAGGCGATCGACATCATCGATGCTGCTGCTGTTGTTGAGGCAATAGCTGGAGAAGAAAAGGTTCCTGCAGATCTGCAAGTGCAGGTAACTAAGCCTACTAGTACAACTTCATGCATGTTGTTCATCATGCTACTATCTAATAACTTCCCTCCCCTTTTGGCTTTGATTTTGTTCTTCGATCACTTTCTTTCTTTTTTTTTTCCTGGTTCGTCGTTTGATTCGAGTTGTTCTTGCATGAGATCCACACTCGATTAGTCCTGCTTCCTCTACTCATGATAACACCAAAAACCCGTGAATACTAGCTTGGAAGATGCCTAATTAACTAGCACTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGGCACCATGGTGCCCGGGCACCATGGTATCTAATGTACAAAATCACTCAAATTTTTCAAAATTTTCAAATTGTGAGTATATACCTAGTTATAATAATTCAATTCATATCTATACCTATCAACAAAACAACTCAAATTTAACTTTATTTCACAATCCATGATTACATACCTAACTAATTATATGCATGGATGCTATATACCTAGAATCAAAATCTAACAAAAACAGTTCAAATTCAGTACAAACATGCTTTGAACTAGTTAGTAAAGTAGTTAATGTTAATACCTAAGTAATTGAAAAAGTTTCATACTCATTTGAATTGGGTATATACTCAATTTCAACAATGGTGCCCGGGCACCATGGAGCACCAAACAAATTTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACACACACACACACACACACACACACACACACACACACATACTTTTTCTCTGTATATATTGATTTACAAGAATTATTCTTACCATCAAATATCAACTAGCAATTTTCTTTTAGAGATAAAGATCAGCAGAAGTTCAGTTCCATTGATTCCTTTGTCTTTCATGTGTAGACATTATATAAAGAGTATGAAGAAATTGAGTGAGTTACATGTCTTTCTCATGTGTTTTCTTCTGAAGCTCACTTGCTTGCAGAAAGAGCCCTTCATAATTTTTTTCTCTCTCTCAACAGGAGAAGGGAGAAACAGTAACTTATAAATCTGCCATGTTAAGAACAAGACATCCTTCATTTGTGTGAAAGTTAAAAATACATGTTGTGCCACCGTTTTGGGTGGGGTTACCGTCACCCCACGGTTTAACGGTGACCGCGGTAACCGAGTTATATACCGTGGTTTCTAAACTGAAAAGGTTACCGCACGTGATAATTATGATAACCGCACGTTTTGTAAACCATGTGTTGGATAACTATGGAAAAGTCAGAAGCACTAAACTAGTAGTCTAAATTTCTTGAAAGGGTCACAACCGTGTTTTTATACGTTCAGAATTTTACAGCAAGGTTAAAAGTATGACAAACTACTAGTTAATAAGATTAACACATCATTTACAACCAATCTAATAGCTCACACATACAATAAATAGCTATAGATATATACTACTATTTCATTAATATATGACCCATCTCTCACACACAGTTTACTATTGAAGCTTGAGCTACAATTAGGCATAAATATGTAGTAAGTTTTCCCTCTCTCTCATCTCCTCTCTTCTTCCTGAGCACAAAATTGATGTGGCAACTCTTATAGCATGCTTTGTATTTGCTCTTAGTTAGTTCCCTACAGCTAGATTGTAGTGCAACATATATATCTGTTTTGTGGTAAGTACATATATTTTTCACTAGTATATGATTCTAATGGCCATGATATTGTTTACGAACAATAATAATTATATCTGTACTAAGTATCAACATGCAGCAAGAGTCCTGCAAATTTTTGTCCTCTATTACCACCCCCCCCCCAAAAAAAAAAAAACAACAGAGACACTTCGGCATTTGGATATTGCATGCGAAGTAACTATTGCACCATGGGCTATGTAAGGAATTCAATCACATGAATCCTATCCAAACAAGGCTTTAGGACTCTATTGCATCTCACTCTGTTGCGCACGTATATATGTTGAATTTGAACTATTCTTATATTGGCGCATCATATCACTAGTCATCTTTACGGGCAATAATATATTGTTAAGTGTGTAGTAGTACTCTGATCACCGTCAGTTTTAAAATATAGCAATCTAATACTCTTGATTACATATCACATAATAATTCGAATCTAATACTGGCTCTTCTTTCTTTAGAGTAGCTAGCGCTAGGTATGTCCTATATTTCACAAAATTTCGTATTTAATCAATTAATACATACTACTGCATTTAATAATCAGGCTATTACTGCAAGTAGCACATATACTACTTTCTCTATTCTAAAATATACTCCCTCCATTTTATAATTAATATAAGGCACAACTATTTTTTAAGATATTTCACAATATTATAAGACATGCATACACATGTATACAATTAACTAGCTAGCATGTGTGTATGTACACCTTTGTATAAAATAAAAAAAATAGTTGCCTACTCCTTCCGTTTCATATTGTAAGATTTTCTAAAATTGCTCACAATTATATAAATGTTGTCTAGATTCACTAAAATTTATAATCTTACATTGTGAAACGGAGAAAGTAATATATTTTAGAATGAAGCTAGGGCCAGGAGTATATATTGCATGCATGCACGACGATTGTTCTGGCTTCCAGCTAATTTTCCGTGTGCATGTAATAACAGGTGCAACGCGATGCCAGTAAGCTGAATAATCAGCATGCCCGGAAGAAGTACTGGCTGCTGCTGTGGTTCCTGATCGTTGTTTGGGTGATGATTCTGACAGATCATTTCTTCGACGTCGACGGAGACCAACAAAAAGATCATGCCGAATCCGACAGCCCGCATTCCACGCTCGCCAAGTTCATCGGCTTCCTGAGTGTCATCTGCCTCATGTTTCGCGCCCTTGATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020694