BGIOSGA020707

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Revision as of 12:50, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020707| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020707, complete gene.| tag = P0686E0...")
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Gene Name

BGIOSGA020707

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020707, complete gene.

LocusTag

P0686E06.36

Ensembl Transcript ID

BGIOSGA020707-TA

Ensembl Protein ID

BGIOSGA020707-PA

Length

3078

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29473299..29476376

Sequence Coding Region

29476239..29476376,29476043..29476100,29475882..29475955,29474662..29474754,29474520..29474590
,29473746..29474424,29473583..29473651,29473299..29473331

Genome Context

<gbrowseImage1> name=IndicaChromosome06:29473299..29476376 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:29473299..29476376 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGCCGGTGCGCGGCGGCGATCGCGAGGGCGGTGGTGGAGTTCCTCGACGCCGTCCTCGTCGGCTTCTTCCTCTCCTTCTTCGGCCCCCACCCCCGCGACCGCGACCGCGACGACAGCCCCGGCTCCGGCCGCCGCGATTCGCTCGCGCACAAGGATCGGCTCGGGGAGCTGCTCTCGGACGACGATGAGCTAGGATTGGGAGGGAGGGGAGGATCTCATGAGGATTTGGCTGATGATTGTGGCAGCGATGAGGAGCTTCGATCCGAGGCAAATTTCCTCAAGTTATGTGGCACACTATTTGAAACACCAGCTGAACTCCATAACATATCCTATCAAATCAATATGGAAAGTTACATTGAGCATGATAAAATTCCCACAAATGTACTGGCAGTGGAAGCAACTCCAGCATTTGAATCTAAATCATCTGGAGGCTTTGAATATGGGGAGGATCATATCTTGACGCCTCAACTTAACACTGAAGATACTGAACATCTTCCACTAGTTAAATCAGTTTATCAATCAGCTATCCGAGGCAACTCCCCCTTCCAGAACATCAAAAGCATCAACGATGGTTCCAGTGATTCACCCTTTCATACTCCTCTAGTATTGAGAGATGATATGCAGACCCCCAGAACTGTTTATACTTCACATAAAGGATCGTCTGGAAAGCGTGTGCGGACCCGCAAACAATTCGCATATCCCATCTTTAGACCAACAGAGAACAAGCTTCAGAAGATGCAACTTTCAGATTCTGCCAAGATGACACAGCAGATCTCTTCAGATTCAGTGGTTAAAGGAGAATCACTCAATTCTTCACATTTCCCTCTTGAGGTGTCTAAGTATCAGCTCGACCGCCAAAGGCTATTGGATGCTGGAGAGAGATCAAAGTCCAATTCAGATGAAAATATTGAGGTGTGCAGTCTATCACGCTGGCTTAAATCTTCACCCGCAGGAAACACGAACCAAATGTACGATGAGAACAATCTTATCGAAGAGGGACATGCCTTTATGACTTCTGAGGATAATGTGGATGTGGACAATCATACTCCGAGGTTGTCCAAGGCTCGGGATTGCCACTGTATTCCAAACACAAGTAGAAAATATGGAGAGGATCAACATGTCAGCTGGCATTCCACACCCTTTGAGGAAAGGTTGATAAAGGTTTTGTCTGACGAGGAGGAAACTTGTCCCTGGAAGGCTTCTCTATCTTGA</cdnaseq>

Protein Sequence

<aaseq>MCRCAAAIARAVVEFLDAVLVGFFLSFFGPHPRDRDRDDSPGSGRRDSLAHKDRLGELLSDDDELGLGGRGGSHEDLADDCGSDEELRSEANFLKLCGTLFETPAELHNISYQINMESYIEHDKIPTNVLAVEATPAFESKSSGGFEYGEDHILTPQLNTEDTEHLPLVKSVYQSAIRGNSPFQNIKSINDGSSDSPFHTPLVLRDDMQTPRTVYTSHKGSSGKRVRTRKQFAYPIFRPTENKLQKMQLSDSAKMTQQISSDSVVKGESLNSSHFPLEVSKYQLDRQRLLDAGERSKSNSDENIEVCSLSRWLKSSPAGNTNQMYDENNLIEEGHAFMTSEDNVDVDNHTPRLSKARDCHCIPNTSRKYGEDQHVSWHSTPFEERLIKVLSDEEETCPWKASLS</aaseq>

Gene Sequence

<dnaseqindica>1..138#277..334#422..495#1623..1715#1787..1857#1953..2631#2726..2794#3046..3078#ATGTGCCGGTGCGCGGCGGCGATCGCGAGGGCGGTGGTGGAGTTCCTCGACGCCGTCCTCGTCGGCTTCTTCCTCTCCTTCTTCGGCCCCCACCCCCGCGACCGCGACCGCGACGACAGCCCCGGCTCCGGCCGCCGCGTAAGGGAACCCCCCTAAACCCTAGCCTCCCGTACACATATCCCTCCCGCTTCGTTGCGGGACCTCGTGTTGGATCGTTTGGTTTTGGGAGGGGATTTGGATTGAGGTGGTGATTGTTCTCTGGCGTTTCCGATGCAGGATTCGCTCGCGCACAAGGATCGGCTCGGGGAGCTGCTCTCGGACGACGATGAGCTAGGTCTGATTCGATCGATTTCGTTGTGTGGTTTCGTGTGGGGGTAAGCGCGTACGTTGTCCCCATCTGTGTGTTTGTGGCATTGTTTAGGATTGGGAGGGAGGGGAGGATCTCATGAGGATTTGGCTGATGATTGTGGCAGCGATGAGGAGCTTCGATCCGAGGTATGCTCGAATGATTTTTCTTTTCCCCGTAATCAAGTGCGATGTAATCTATTGTCTGATTATGTACTTCTTCGGATGGCTATTGTCAGTGTCGCGTTCTAGTTTGAGGTTGACAGTCTGATTGTGTATGTGCAACCTTCAGCTTACCAGAAACTAGATCTCAAGTGTTTTTGATCCCTTGTTGTGTTTTTCTACTGTTTGGCTGATAGAATTAGCTTTATACCGTGCCTTCACTCGATTTACTGGCAGTAACAACTATTGCATAAGTTCCATGAAAAGTGCTAAGCTAATTTCTATTGTAAAGTACTAGAGTGAGCACCTAGAGAGTTTGTTGCAAGATTCTGCAGAACGTTTATCCATATTTGTTTGGTCGTGCACCTAGTAGTGATCAGTGAATTAGGAGCTATATATGTCCTAACCGGCAATTATATGACCTGGGAACCCGTTCCTTGTATATGTCCTAGTAGACATGTTCTTAAACACTCAGTATTGCTGGCTGGATATATCTTTTATATTGGTGAGAAAATAGAGAGAAATCACAAGGACTACTGTTTTTGGAAGGAGAATGGAGATTTGGATTCATGGTCTTGACAGCCACCACCTTATGTTCTATAACTAGGCCACATCACCTCACAATTATGTTATAACAATAATCGGATGGTTGTGGAATTTCTTGGAGTTACGGTGTATGGTTGAATCAGTTTTTAAATGAACTGTAGTAAGATCTGTCCTGTAAAAAAGAGTTTTATTTTTTGTACTGTAGTTCAGTAAATGTTTTTATGGGCTTATGAGCATTGCATTTGCAGATAATATGTTTATGTTATATGCTTTGGGCATAAGATTTTGTCCAGAATTTCCATCATATATAGGATTGGAAAGCTCAGTGATGCTACTCCTGTTTTGATTATATTGGTGTACATGTGTTATCTACATATTTTTTTATCTTCTGCAGTTTTTCCTTTTGCTCTCGAAGTCACGCTCTTATCCAGTACCCTTTTTGTTTAGACCTTGTTTAAGATGGTAAATTGTTGAGTACTGAGCTGTTGAGATATACTCTTTATACATATAGTCTACTAGTACTTTACTGTGAAGTTGAATTTTTCATTGCACTTTTTAACTCTACACAGGCAAATTTCCTCAAGTTATGTGGCACACTATTTGAAACACCAGCTGAACTCCATAACATATCCTATCAAATCAATATGGAAAGTTACATTGAGGTGAGAAGAGCATTTCTGAATATTTTGTTTATCAATATTCATTCTCTGATACCTTCACTTCTGATATGTAGCATGATAAAATTCCCACAAATGTACTGGCAGTGGAAGCAACTCCAGCATTTGAATCTAAATCATCTGGAGGGTAAGAACTGCCCTAATTTCCATTAGTGTCTGAAGTTTTTTAATATATTATCATGGTGAGATATTTAATTGATGCTTCATTTTCATACTATGCAGCTTTGAATATGGGGAGGATCATATCTTGACGCCTCAACTTAACACTGAAGATACTGAACATCTTCCACTAGTTAAATCAGTTTATCAATCAGCTATCCGAGGCAACTCCCCCTTCCAGAACATCAAAAGCATCAACGATGGTTCCAGTGATTCACCCTTTCATACTCCTCTAGTATTGAGAGATGATATGCAGACCCCCAGAACTGTTTATACTTCACATAAAGGATCGTCTGGAAAGCGTGTGCGGACCCGCAAACAATTCGCATATCCCATCTTTAGACCAACAGAGAACAAGCTTCAGAAGATGCAACTTTCAGATTCTGCCAAGATGACACAGCAGATCTCTTCAGATTCAGTGGTTAAAGGAGAATCACTCAATTCTTCACATTTCCCTCTTGAGGTGTCTAAGTATCAGCTCGACCGCCAAAGGCTATTGGATGCTGGAGAGAGATCAAAGTCCAATTCAGATGAAAATATTGAGGTGTGCAGTCTATCACGCTGGCTTAAATCTTCACCCGCAGGAAACACGAACCAAATGTACGATGAGAACAATCTTATCGAAGAGGGACATGCCTTTATGACTTCTGAGGATAATGTGGATGTGGACAATCATACTCCGAGGTTGTCCAAGGCTCGGGATTGCCACTGTATTCCAAACACAAGTAGAAAATATGGAGAGGTATTATCACTGACTCATCTAGTGATTTTCTTAAGCTGGGCTTATATGTAAATTCACCACTTGTTCTGAACTTCTGATGGTTTACTGTTGTTAGGATCAACATGTCAGCTGGCATTCCACACCCTTTGAGGAAAGGTTGATAAAGGTTTTGTCTGACGAGGAGGTGCCCCCTACAAGGTAACTTATACTTCCTCCGTTTTACAATATAAGACTTTCTAGCATTGTCCATATTCATTTAGATGTTAATGAATCTAGACATATGTATGTGTTTAGATTCATTAACATCTATATGTATGTGGGCAATGTTAGAAAGTCTTACATTGTGAAACGGATGGAGTAGGAAATTTGTCTACCCATCTTTTACAGAACCTGTCATACATGGTACTAATTGTGAAATCATATGTTTCAACACAGGAAACTTGTCCCTGGAAGGCTTCTCTATCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020707