BGIOSGA020784

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Revision as of 12:51, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020784| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020784, complete gene.| tag = OJ1226_...")
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Gene Name

BGIOSGA020784

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020784, complete gene.

LocusTag

OJ1226_A12.22

Ensembl Transcript ID

BGIOSGA020784-TA

Ensembl Protein ID

BGIOSGA020784-PA

Length

6124

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27801236..27807359

Sequence Coding Region

27807267..27807359,27804461..27804582,27803113..27803296,27802948..27803031,27802724..27802798
,27802553..27802636,27802359..27802448,27802155..27802256,27801980..27802075
,27801787..27801858,27801590..27801685,27801374..27801478,27801236..27801277

Genome Context

<gbrowseImage1> name=IndicaChromosome06:27801236..27807359 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:27801236..27807359 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTGACAGTCTGGTCCCGCATGTGGCTCCTCTTGCTCAGATGCACCTGCGACCAGCGGCAGAGGAAGCAGGCACGGTGGCTGTCGGCGTCCGTCCGTCCGTTGTCTTCTTCCAAGATCCCAGACGATGCAAGCCTCATCGGCGGCGGCGGCGGCGGCGTGCTCGGCTATCAAGCCGGCGGCGCATCAGCACACCGTGCAAGTCCAGGAAGTCTCACAAGAAGCATAAGGAGGCAAAAAAGACAACATTTTCCAGTCCTCCAAGTGAGATGCTATGCCATTCCTGGTGATCAGCACGAATCCATCGCCACTGAGTTTGAAGAAATTTGCAAAGAAGTTCCCCAGAAACTGGGAGCTTTTTATCGGTTTTGCCGACCCCACACAATTTTTGGCACTATAATAGGAATCACTTCAGTTTCTCTCCTGCCAATGAGGAGCCTAGATGATTTTACTATGAAAGCATTATGGGGATTTCTTGAGGCTTTATCCTCTTCTTTATGTATGAATATCTATGTTGTAGGCCTGAATCAACTATATGACATCCAGATTGATAAGGTTAATAAGCCCAGCCTTCCGTTGGCGTCAGGAGAATTTTCAGTGGCAACTGGAGCAGTGTTAGTACTCACGTCCTTGATCATGAGCATTGCCATTGGAATCAGATCCAAATCAGCTCCTTTGTTATGTGCTTTGTTTATCAGTTTCTTTCTTGGAAGTGCATACTCTGTTGATGCTCCGTTACTCCGGTGGAAAAGGAACGCGTTTCTCGCTGCATCTTGTATACTATTTGTAAGAGCTGTCTTAGTTCAGCTAGCTTTCTTTGCACATATGCAGCAACATGTTCTGAAGAGGCCCTTGGCACCAACAAAGTCGGTGGTTTTCGCAACATTATTCATGTGTTGCTTTTCTTCAGTTATAGCTTTATTCAAGGATATTCCAGATATTGATGGTGACAGACATTTTGGCGTCGAATCCCTGAGCGTACGTTTGGGTCCAGAAAGAGTGTATTGGCTCTGCATAAACATACTATTAACAGCATATGGGGCTGCCATTTTGGCTGGAGCATCATCTACAAATCTATGTCAAATGATTATCACCGTTTTCGGCCATGGCCTGCTTGCCTTTGCACTTTGGCAGAGAGCACAGCACTGTGACGTTGAAAACAAGGCGTGGATCACATCATTTTACATGTTCATTTGGAAGTTGTTCTACGCTGAGTATTTCCTTATACCATTTGTGCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MALTVWSRMWLLLLRCTCDQRQRKQARWLSASVRPLSSSKIPDDASLIGGGGGGVLGYQAGGASAHRASPGSLTRSIRRQKRQHFPVLQVRCYAIPGDQHESIATEFEEICKEVPQKLGAFYRFCRPHTIFGTIIGITSVSLLPMRSLDDFTMKALWGFLEALSSSLCMNIYVVGLNQLYDIQIDKVNKPSLPLASGEFSVATGAVLVLTSLIMSIAIGIRSKSAPLLCALFISFFLGSAYSVDAPLLRWKRNAFLAASCILFVRAVLVQLAFFAHMQQHVLKRPLAPTKSVVFATLFMCCFSSVIALFKDIPDIDGDRHFGVESLSVRLGPERVYWLCINILLTAYGAAILAGASSTNLCQMIITVFGHGLLAFALWQRAQHCDVENKAWITSFYMFIWKLFYAEYFLIPFVQ</aaseq>

Gene Sequence

<dnaseqindica>1..93#2778..2899#4064..4247#4329..4412#4562..4636#4724..4807#4912..5001#5104..5205#5285..5380#5502..5573#5675..5770#5882..5986#6083..6124#ATGGCGCTGACAGTCTGGTCCCGCATGTGGCTCCTCTTGCTCAGATGCACCTGCGACCAGCGGCAGAGGAAGCAGGCACGGTGGCTGTCGGCGGTAAGCCCATGGGGACGGGAGTGGAGGAGGTCGCGCCTCCACGCCGTCCGCATCTCCGTCGGTGAGAGGAGGGAGGAGAGGGGAGAGAGGGGAAGATAGGTGAGATGGGGGGAGAGAGGAGGTCAGGAGGAAGAAGAGGAGGGGATTGAGAATGACAGGCAGGGCCCACATGGGTCCCACCATTTTTTATTATTGTGTATGTGAAGCTAACATGTGGGTCCCACGGGTTTTACTATTTTTTCGGATCAAATTGCCACGTAAGGGCCACGTCAATGCCGCGTTAAATGAAGACTGAGTCAAATTAGCCACGTAGGCACCACGTCAGCTAAAACCGCTGTCCAAACCTCCTTATGACCTATATTGCACCGGTTTTGATAATTAAGGGACCTATTATATCTGATTTTTTGGTTGAAAGACGAAAATCGGATTCGTCAATAAGTTAAGGGACCTCAGATGAACTTATTCTGGGAGAAAACGAGAAAGAAATAAGTCCACATATCGCCTCTCAGTTTTCGTGGAGTTTAATTGACATCCCTAAACTGTAATACCAAAAATCTTCACCCCTTATACAGACGAAACCGGCCAAGCCAAGTTCCATGACAGTACGGATGGTTGGTTTTGGGCTGACGTCATATCTTAGTCAGCAAAAAGAAAATTAAAAAACATGTGGTCCACATGTAAGTGGACCTCCTCCTCTCAACTATCCCCTCTCTTCCCCATCTCTCCACCTCTCCCCTCTCTTTCCCAGGAGCTCAATGGAGGAGAGAGTGGCAGTGACTGGCAAGCCCGTCCGCGGGAGACAGCGCGGCGGTGGGAGGTCGGTGATGAGAGGGCTCTTGTGGACCATGGCAGCAAAAGGAGAAGAGGAGGGAGATGAGGGAGTCGGCGAGCTCTAGCTCACCGACAGTCCATGGGAAGGTGGCGGTGAGCAGTCGAAGAGGATGGAGGGCAATGGTAGTCTGCGATGACGGAGGAGAGGACCCGATGCCCCGGTAGCTCCGTCTTGGGTGCTCCTGTACGTGGTCCTGTGACACTGGGGATGGGCTCTTCCCTACCGCTAGGAGTGGGGCTTACGTCGCCGCCGATTATGTCGAGAGTGAGAGGAGGAGCCGCTAGGTTGAGGAAGGGATGCCACGGTGGTGGCGATGGAAATCAAGCTCGAGCGGGGTGTCGTTGCCATGTCCTAGTTCCAGCCCCAAGCCACTCACGCTGCCCGACTCGCTAGGTAACTCCTATCATGCCTCCTGCGGCAGGAAGCGCTCCACATCGAGTCAGCAACGGTAGCTCAGCCCGATTCCTTTTNGTCGCTTCTCGCCTACCCGACAGCTCGACGGAGGCGGCGAGCTGATGAGGTTGAAGGTGAAAGGGGAAGAGCCAACCTGGATGACGAGCTCCTCCTCCTATTCGGAAGCTGAGGAAGTCCCTGCTCTATACGGATGTTTCTACTTCGGTTTGGCCTCTGTCACCACCATGGCAGACCCATCGCCGCACTAGACCTCCTCGCCTTGAGCTGCTTCCTCATCACCGCTCCTGGTTAGCCCCCACTTCTCAATCACCGCTCTCTAGCAACGTGCTCGATGCATCAAGCTCCAAGAACCAAAGGGAGATGGAGAGAAAATGGAGATGAGGGAGGGAGAAAATGGGAGGAGAGCGAGGATTATATGTGGGGCTCACTTTTATTTTTTTTCACGTATACGCCTAGTCAGCATGAGTGGACCGGGTCAACTTGTTATGTCAATGAAACCAACCATCTATACTGACGGATGATCTTAATTAATCTGGTTTTGCAAGTTGGGGTTGAAGATTTATAGTATTGCAGTCTAAGGATGCCGTTTAAACTCGACGTGAAGGTGATGGATGGCAAGCAAACTTATTCCAAACGAGAACCAAAATTGCTAAAAAAAAACTGTCGCAAGTTTTATAGGAAAAAACTTTCAAGTGTAACTACAGTATAGTTGTAGTGTAACTATAATGTAAATTTACTATAGTTATATTGTACTCCCTCCGTCCCATAAAAAAAATCTAGTACTGGATGTGACATATTTTAGTACGATGAATCTGGACAGATATATGTCCAGATTTATAGTACTAGGATATGTCACATCCGATATTAGGTGGTTTATGGGACGGATGGAGTAATTGTAACTACAATATAACGTAACTACATGTAATCTCTATATAAGTTAGATATAAAGTTGCGTATATTATTTTAATACTTATATACAAGTTAATATTATAGTTACAGTGGAATTATATTACAATTGTAGTATAGTTAGATTTGAAAGTTTTTCCTAAATAACTTGCGGCGGTTTTTTAGACGCGCGTTTTCGCGGCCCAATGGGCTGACTGCCCGGCTAACTCCCGTGGACCATGGCCTGGTTTCCAACGCGTGAGTTGTAGTGCAGCACAGGCAGGCGGCGTGGGATAGCTGCCTGCCTGCGTCGTCATCACTGCTGGCTGATGCGCAGTGCGGCTAGCATAGCTGGTTCGGTTACATGCACGCCATGCATGCGTGCATTAATCAGCAGCAGAAAAGCTTGCGTCCCCCAACTCATCGATCCCCACTCCACACATCTCCCTTCCATCGATCGATAGATCAGCTAATCCCTCGCATAAATCCTCGATCCGGCCGGCCGGCGGCTTAATTCCTAGGTTTTCCTCCTCTTCAGTTCTTCCTCATCTAGTCCGTCCGTCCGTTGTCTTCTTCCAAGATCCCAGACGATGCAAGCCTCATCGGCGGCGGCGGCGGCGGCGTGCTCGGCTATCAAGCCGGCGGCGCATCAGCACACCGTGCAAGTCCAGGAAGGTAACCGGCCGCCGCCAGCTGACACACAACTCTTTTATACTGTCTTTTGTTAGTCTTGTTCTTTGATTACTTCGGTTTGATTTGAGGATTTTCTTTAACTTGGGTGCTGCAGATAAGAGGGGATCGGAATTCAGGGCTCGGTTTGGAACGAGGAAACTGTCCTGGGGAGGTATACAGAGATTCGTGTTTTCGTTCTATATTTAGTATGTTTTTTCAATAAAAATCAACATTCCAGGCATCCGGGTTGGGTTGTTCGTAGATCAAATCCAGCTAGCCTAGATGCACCACAAATAGAAGAAGATGGGGGATAAAGCATAAAACCTTAAAACATTTGAACTGCATGCGCATGATAATTGCAGGATCAAACAAGTATTCAAGTTTTTCACTATGAAGAAAAAGATTGTACATTTGGGTTCCTAGTTCTCCGGAAGAGTTTCAGGATCTTGCGATCCTTTTAATTGTATAGGGCGGATCTAGCATGGAGGCGGTAGAGTCTCGAGCCTCCACTACTTACGTGAGGACCATGGGAGCCCCTGCGAAGCCCCTACTAAAATTATTGGGTTTGTTGGAACCATGACACCCTATATTTGCAAAATTTGAGATATGCCACCCGTATCTCAATGACATGTAAGACCCACATGAGTCAATGACATGTGGGTCAGGGTGGCATATCACAAATTTTGTAAAATTTGTGTGGCATGGTTCAAATTGTCCCAAAATTTGCAAATATAGGGCATTACTGATTAATATGTCCTCAATTTTTCAGCCACTAAGTTTTAGAAGAATTCGAAGGTGCATATTTCTGAAATGAAGTTTATCCTAATTAACAAATTCATAGTTGTGTCCTTTTCAGTAACTGTATTTTTTTTCCTCTTCTTTTAGGAGAAATAAAATACCTTGTTGATAAAATGGATGAATAATTTAGAGATGTTAGTGTGCACTTTCCCCCATGAAACATAAGTTGTTAAAATATAATTTGTCCAAAGTGACTAATGTACTAAACACTTGTCCTCAATTACACATTACAGGTAAATTGTCGGTGGAAAATTCTGCCCTACACCAGTGTCAAAGGCAAGCACTCTCGTAAATCTGGGGTTAATATTTTCGATAGCCCACTATGACAACTTCACAAGTAAAACTAAGTGCAATTTTAAATGCTACCAGTCTCACAAGAAGCATAAGGAGGCAAAAAAGACAACATTTTCCAGTCCTCCAAGTGAGATGCTATGCCATTCCTGGTGATCAGCACGAATCCATCGCCACTGAGTTTGAAGAAATTTGCAAAGAAGTTCCCCAGAAACTGGGAGCTTTTTATCGGTTTTGCCGACCCCACACAATTTTTGGCACTGTGAGTTTCATTCAATTTTGTATGGCAGTTTCGGATGCATGTTGCCTAGCTACTGCTTATTGTTCTTGGATTGTTTGTCAGATAATAGGAATCACTTCAGTTTCTCTCCTGCCAATGAGGAGCCTAGATGATTTTACTATGAAAGCATTATGGGGATTTCTTGAGGTATCATACATAAATTTTGTAATGAATGCTGTGCTCAAGAGATGTTTTAAATTAAATTCCTGATGAACCCTGTGCTCAACAGATGCTCAAAGTTATCTTCTTAATGGTCTATAGATATACAACAGCCATTTATTTTTCCTTATGTGCAGGCTTTATCCTCTTCTTTATGTATGAATATCTATGTTGTAGGCCTGAATCAACTATATGACATCCAGATTGATAAGGTGATTTTTTACTTGCTGTTTGAAAACATTTTCTTCTATCATGTGATATGTAGTATCATTGTGATTAAATCATACTTCTTTTTGGAGGTTAATAAGCCCAGCCTTCCGTTGGCGTCAGGAGAATTTTCAGTGGCAACTGGAGCAGTGTTAGTACTCACGTCCTTGATCATGGTATATTAGGTTCAACGCCAAGAATAAAGAATCAATTATTCTAGTTTGAATAAAACAGGTTTTATGTCAATACACCTTCCTCACATTTTGTTTCCTTTTGCTAGAGCATTGCCATTGGAATCAGATCCAAATCAGCTCCTTTGTTATGTGCTTTGTTTATCAGTTTCTTTCTTGGAAGTGCATACTCTGTTGATGTAAGTAGTTTTTACCGAGCTTTGTAAGTACAAATGGTGTTCCATGATCCCATCTAACATATAAATACTTGTATTTTCAATCCATCATACTCTTTTTTTCAGGCTCCGTTACTCCGGTGGAAAAGGAACGCGTTTCTCGCTGCATCTTGTATACTATTTGTAAGAGCTGTCTTAGTTCAGCTAGCTTTCTTTGCACATATGCAGGTAGTACAAAACATTGTTTACATCTCAAGTTCAAATTCCTTATTTCCCTTTGGTTAGTATTGAATTCTTCTTGTAACAGCAACATGTTCTGAAGAGGCCCTTGGCACCAACAAAGTCGGTGGTTTTCGCAACATTATTCATGTGTTGCTTTTCTTCAGTTATAGCTTTATTCAAGGTAAATGCCCAATTATGTTGACTATATGTTCACGTGAGATCACAATGGCTTTTCTTCAGTCATAGCCTTATTTCATCCATCTCTTCAAATATCATCACTGGGACCTTTTCTGAATTTTCAGGATATTCCAGATATTGATGGTGACAGACATTTTGGCGTCGAATCCCTGAGCGTACGTTTGGGTCCAGAAAGAGTAAGAACATATCCAATTCTACCACTGGAAAACAAAATAATGGTTCTACATGCCATTCCAGATTTAAAAATGGTGTAAAATCCTATTTTTATCTGATTTAGGTGTATTGGCTCTGCATAAACATACTATTAACAGCATATGGGGCTGCCATTTTGGCTGGAGCATCATCTACAAATCTATGTCAAATGATTATCACCGTGAGTGAATTCTTCACTTCTGAAAAGAAGAAGAAAAATTGTTCATTTCAAAAAAAAATTTCCCCAGTTTGAAAGTTGAGAAGTCCTTTTGCTGTTGCATTGATAATCCAGGTTTTCGGCCATGGCCTGCTTGCCTTTGCACTTTGGCAGAGAGCACAGCACTGTGACGTTGAAAACAAGGCGTGGATCACATCATTTTACATGTTCATTTGGAAGGTGATTAATGATAGTGTTCTAGTTTATACGATGAATTTTGTTAACCAATTAAACATTGGTAATGTTAATCATTTGCATTGTTTGTATTCCTTGCAGTTGTTCTACGCTGAGTATTTCCTTATACCATTTGTGCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020784

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020784&oldid=43309"