BGIOSGA020799

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Revision as of 12:52, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020799| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020799, complete gene.| tag = OsI_238...")
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Gene Name

BGIOSGA020799

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020799, complete gene.

LocusTag

OsI_23872

Ensembl Transcript ID

BGIOSGA020799-TA

Ensembl Protein ID

BGIOSGA020799-PA

Length

6115

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27458748..27464862

Sequence Coding Region

27464597..27464862,27464400..27464495,27462096..27462104,27461921..27461978,27461308..27461376
,27461091..27461216,27460914..27460964,27460762..27460839,27460569..27460668
,27460391..27460425,27459926..27460300,27458748..27458753

Genome Context

<gbrowseImage1> name=IndicaChromosome06:27458748..27464862 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:27458748..27464862 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCATGGAGAGCGCGTACCATGATGAGCTTGCTCCGGCGGCGGCGCCGGCGCCGGCGAAGGGAGGAGGGAGCAAGAAGAAGAGGAAGCAGCAGAAGAGGGAGGAGAAGAGGAAGGAGTGCAGGCTGGTGAGCTACCACGAGCTGCCGGACTACATGAAGGAGAACGAGTTCATCCTCGACTACTACCGCTCCGAGTGGCCCATCCTCAATGCCCTCCTCAGCCTCTTCTCCTGGCACAACGAGACCATCAACATCTGGACGCATCTTCTTGGGTTCGTGCTGTTCTTCGGCCTCACCGTCCTGCATCTTGGCCAGTACTTCCCCCAGGTTGCTGATCTCATCGGACACCTCTCCTGGGATGGCAGATCAGTTGTCAGTTCTACAGACGATTGGCCCTCCAAGTACTCCAAATTTTTTGTTCAACTTGATGATGGCTTAGAGTTTTCCTTCACTGATAAGAGGCGGTTTGCAAGAGTTCGGTTGTTTGAAGATCCCGAAACTGTACCCCCGATTTCTGAGTTAGGACCAGATGCTCTCTTTGAGCCGATGTCTTCTGACAGTTTTGCGGACTCGCTGAGCAGAAAGAAGATTGGAATAAAAGCTCTTCTACTCGATCAGAGCTTCATATCAGGAATTGGTAATTGGATTGCAGATGAGGTGCTTTACCAGTCGAGAACCCATCCATTACAGATTGCTTCAAGTCTATCCAGGGAGAGTTGTGAAGCACTACACCAAAGTATCCAAGAGGTTGTGAAATATGCTGTTGAAGTTGATGCTGATTGTGACTGCTTTCCTGTGGAATGGTTATTCCATCACCGATGGGGCAAGAAGCCTGGTAAAGTCAATGGACAGAAAATTGAGTTCATAACAGCTGGTGGCAGGACTACAGCATACGTGCCACAACTGCAGAAGCTGACTGGAATGCAATCTAGCAAAGTAGTCATTGCTAACCCAGAACAAGTGGCAGAGAACGATGATGCGAAGGAAATAGACACAGATCCAGAAGATGCTGATAATTTGAATACAAAGAAGCGAGGAGCAACTTCTAGGGTTGCCAGGGGAAAGCAAAAGAGAGATGCCATAGGTGCCCTTTCCAGAAAGACAAGGAAAAATGGTGGTGGCAAGGAGAAACCAGGTAGTGACTATAGTGAAGATGATGCTGAGACTGCTGAACCAAACAAAGTTAGCACCAGTAGCAAGGGCGAGAAGGCAGATCCGGTGAGAAGATCATCAAGGACCGCATCGAAACCCCGCCAGGTTTAA</cdnaseq>

Protein Sequence

<aaseq>MATMESAYHDELAPAAAPAPAKGGGSKKKRKQQKREEKRKECRLVSYHELPDYMKENEFILDYYRSEWPILNALLSLFSWHNETINIWTHLLGFVLFFGLTVLHLGQYFPQVADLIGHLSWDGRSVVSSTDDWPSKYSKFFVQLDDGLEFSFTDKRRFARVRLFEDPETVPPISELGPDALFEPMSSDSFADSLSRKKIGIKALLLDQSFISGIGNWIADEVLYQSRTHPLQIASSLSRESCEALHQSIQEVVKYAVEVDADCDCFPVEWLFHHRWGKKPGKVNGQKIEFITAGGRTTAYVPQLQKLTGMQSSKVVIANPEQVAENDDAKEIDTDPEDADNLNTKKRGATSRVARGKQKRDAIGALSRKTRKNGGGKEKPGSDYSEDDAETAEPNKVSTSSKGEKADPVRRSSRTASKPRQV</aaseq>

Gene Sequence

<dnaseqindica>1..266#368..463#2759..2767#2885..2942#3487..3555#3647..3772#3899..3949#4024..4101#4195..4294#4438..4472#4563..4937#6110..6115#ATGGCCACCATGGAGAGCGCGTACCATGATGAGCTTGCTCCGGCGGCGGCGCCGGCGCCGGCGAAGGGAGGAGGGAGCAAGAAGAAGAGGAAGCAGCAGAAGAGGGAGGAGAAGAGGAAGGAGTGCAGGCTGGTGAGCTACCACGAGCTGCCGGACTACATGAAGGAGAACGAGTTCATCCTCGACTACTACCGCTCCGAGTGGCCCATCCTCAATGCCCTCCTCAGCCTCTTCTCCTGGCACAACGAGACCATCAACATCTGGACGTATGGATTTCAACCTGAATTTTTCTGAATTTGATTCTGGTTCAGCTTTGTGTGTTGTGTTCTTGCTGCTCATCGTGTGGGTGTTCTTGGTGTTTGTTCAGGCATCTTCTTGGGTTCGTGCTGTTCTTCGGCCTCACCGTCCTGCATCTTGGCCAGTACTTCCCCCAGGTTGCTGATCTCATCGGACACCTCTCCTGGTGGGTTTGTGAAAGCCTCAGTGGAATTTGTTTGGTTAAAATTTTGGCTAATGTGTCCTGGAATTAGTAGCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGATTGCCATTCCTCCATCAAAAACTAATCCCGTTAAGACGTCCATGGCGTGATGACAATCAATGCTATCAGGCGGCCTCTGCGTATTAAAGAGTGTATACATGGTTTAACTGTTGGCCCTTAACTGTTAGATTCCTTATAACGGAACTAGCCCACTCGAATTTAGTTTCTAGATTTTACATGGTTACTCATATATTTACGGTTATTCTTTTTTTTAAGTGATAGACGACGTATCTGTAGATAGCGAGACACATATAATGACCTCGTTAATTTTAAGATATGCCGGCTCAGTCTCTTCTGAAGGTGTTCATAAGATATGAGTATGTGCATTCAAGGAGTACGTGTTATAGCGTCTGTATTTATATTGCCTTTAAAAAGAGTGTATACAACTAGACGCGCATATTTAATGTACGTCATACTCCCATCATCAAACATTTAGGGTGTTTTGGAGGGTTCTCTCCGACACGCAAAATGAAATATACATTAACGCATTATTAATTCAATATATTAGTTATTTTTAAAAAAACTAATATGATTTTTTATAAACAATTTTTATAGAATTTTCTTAAAAAAATAAATTGTTCATAGAAGTTTGGAAAGTATACGTGCAGATAAACAAGGAAGGAGAAGTTGTGAACATAGGCCCTGTTTAATTTCCAAAAATTTTCGCAAAAACATCACATCGAATCTTTGAACACATGTGTGGAGCATTAAATATAGATAAGAAGAAAAACTAATTGTACAGTTTGCATGTAAATCGCGAGATAAATCTTTTGAGCCTAATTAGTCCATGATTAACCATAAGTGCTATAGTAACTCACATGTGCTAATGATGACATGATTAGGCTCAAAAGATTGGTCTCGTTGTTTCCAGGCGAGTTATGAAATTAGTTTTTTTATTTGTGTCCAAAAACCCTTTCCGACATCTGGTCAAACGTCCTATATGACAACCAAAATTTTTTATTTCACCAATTAAACAGGCCCATAAGAACCCAACATAATGCAATTAGACACACGTATTTAATACACGTCGCCACACGTGTTTGTTCAGCGTTAGTAGTATTATTCTGATTTGAGGATATCATTTTTGAATAGTCGAATCGAATAGGGTACGGGCCGTGGGGGTTCATAAATGGCCGACCTGTGATGTGAGTCGTCCACACCCCACACCCCACCCAACCCGAGCCTCAGCCGACCGACTCGACGACGTCTCGCGCTAATCGCAACGCCGACGCCCATTTATGACCAGCCTTCGCTAGGCTGCACGTCTCCGTCCCGTATCATATTGCCGTCTCAGCGACCCAGCCGCCGCGCCCCCTACCACTGCCAACCCAATCCATCTCTCTCTCTCTCTCTACTGCTCTCCCCGAACGCGCTACCGTTGTTGGACCCGACGACGACACACGCGGTGGGTGCGTGCAGTGCAGCCAAGAAGCCAGGTGGTACGCGAGAGAACCAGACGAGGCCCGTGAATCTCCGCGATTTCCATCGCGCGCACCGGCCCGCGCGCGGGCAAAATCCCAGCGGCGGCCACGCGGAGGCGAACTACACCGTGCGCGCGCGCGGCGCCTCTTCCGCTTGGGCCGCGCGAAATTTACGTGCGCGCACGTACGCGAACGGGACGAAACGAAACGAGGCAAAAAAAAAAAAAAAGGCCACAACACTGCGGCGGGAGCTGCTTCTGCTGCCGCTTGGGTTGGGCCACGCGAGCGGCTCAGCCTAGTACACGCGGCTCAGCAAATGGGATAAGTCTTTTTACCTCCCTTAACTCTTGCTGTTGATTGAATTGCATCCCTCAACCATAATAGCAGAGAACAGGTGAGAGAGAGGGAGAGGAGAAATAGGTGAGAAAAAAAGAGATGAGATTAGGATGATTGGCATGTGAGCTGATATTTTTATCTTTTTCCTGGCTAATATGTGAGTCCTATGAGCGTCACGTAGGATGAAACCGCTATCCAATAGCTGAGGTACTTTTATTTACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCAGTACTGCCTCCTCCTCCTGCAGTTCGATCGATTGCTTTTTGCTACTAGTAAATTGGAGTGACAAATTGCTGTGTGTGTTGCAGGGATGGCAGGTGCGATCTACATTAAGGGAGTTCCTGTGACCAAGTACAAGAGGCATGTGTAATTTGTATGCTGGGGAATTTGTTATACAGTAATGGACTACATGCTGATTCAGAAAATTATTGCAGATCAGTTGTCAGTTCTACAGACGATTGGCCCTCCAAGTACTCCAAATTTTTTGTTCAAGTAAGATCTCCTAGCTGTCACAGCATCTTTTTTCAGTACATTGCTGCTATGTGAGATCAAAATTAACAGTTTATAAGCAAAAGGGGATATGGAATTGTTGTTCATCAGTACTGTACTGTACTACTTTGGTTGGGTCTTATAAAGAGAGAGATGGATAGGTAGTAACTGTCATCGTTTAGCTTGGACACAAGATCGATTTGTTAGGCTATATAGCTCAGAAAACATCTTTTGGCTGAGCCTCTAGCGGACTAGCTAATCCAAAATGCGGAAGAACAAATCGCCACAAACAGTAGTGCTTTTGTGATCTCCAGAAAGCCAGAAAGGAAGACGTGCCATGTCTCAGGGTTAACATGCTATCATATAAACACGTCAATATTACTTCTGCTATATAAGGTTTATTGAATAGTAATATAACACGCAATGCATGCCTAGGCATTGTTGTTTAGTCAAAATTTGATCTCCTCTTATTGTTTATGTCCTTTTATGATATCATAGGTTGGCTCTTTTAATGTTGGTTGTTTCTAATGCATTTAACTTGTTCCAGCTTGATGATGGCTTAGAGTTTTCCTTCACTGATAAGAGGCGGTTTGCAAGAGTTCGGTTGTTTGAAGATGTATGTGCTTTGACTAGTTGAATCTAAATCTTCAGAGTCTTCCTTTCATGTTATTTTCTAATGATGTCCCTAATCAAATAACGATTTGCAGCCCGAAACTGTACCCCCGATTTCTGAGTTAGGACCAGATGCTCTCTTTGAGCCGATGTCTTCTGACAGTTTTGCGGACTCGCTGAGCAGAAAGAAGATTGGAATAAAAGCTCTTCTACTCGATCAGGTGATTTTATTACCATAGAACCAATATGAGTTTTTAGCTCCACAAAATTGTTTCTACAATATACGGGATTAGGTCCTTGTATCTCCTATACAAACAGAAGACTTGATTTTTTTTTTTATTGAACAGAGCTTCATATCAGGAATTGGTAATTGGATTGCAGATGAGGTGCTTTACCAGGTATTAATACAAATATTATTAGAGCTTGAATGAAATGCATAAATTTTAATTATGAATTCATGTTGTTTTTTCAGTCGAGAACCCATCCATTACAGATTGCTTCAAGTCTATCCAGGGAGAGTTGTGAAGCACTACACCAAAGTATCCAAGAGGTTGTGTAATTTGACATTATTTCAAATAATTTTAGTGTATTCTACTGATGTACAATCACGGAGAACTTATGCCTGAAATAAAGCATATTTCAGGTTGTGAAATATGCTGTTGAAGTTGATGCTGATTGTGACTGCTTTCCTGTGGAATGGTTATTCCATCACCGATGGGGCAAGAAGCCTGGTAAAGTCAATGGTGAGATTGTCCTCAAGTTTTATCATGAACTCGTTATTGTCTTGAATAAAATTGAGCAAAGCGTTCGCTTGTAGTTTTGCTGATATATGATGGTATATAATCGAACATGTTAATTATTACCCACTACTTTAAATGTCTTGCAGGACAGAAAATTGAGTTCATAACAGCTGGTGGCAGGGTAAGCTCTTATCTGCTTCAGTACTACTACACTTTCTAGTGCTACGAACATTCATGCATCTACCCTCTGATTTGTACTCTCACCATTTAGACTACAGCATACGTGCCACAACTGCAGAAGCTGACTGGAATGCAATCTAGCAAAGTAGTCATTGCTAACCCAGAACAAGTGGCAGAGAACGATGATGCGAAGGAAATAGACACAGATCCAGAAGATGCTGATAATTTGAATACAAAGAAGCGAGGAGCAACTTCTAGGGTTGCCAGGGGAAAGCAAAAGAGAGATGCCATAGGTGCCCTTTCCAGAAAGACAAGGAAAAATGGTGGTGGCAAGGAGAAACCAGGTAGTGACTATAGTGAAGATGATGCTGAGACTGCTGAACCAAACAAAGTTAGCACCAGTAGCAAGGGCGAGAAGGCAGATCCGGTGAGAAGATCATCAAGGACCGCATCGAAACCCCGCCAGGTAAATAAATTAAAAGAAAGATAGCAAGAGATGAAGAGACTCGCTGATGTTCGCAAAGATCATTTTGGTGTGTGTATAGCTTTAGCTTTAGATGCTCTCCGATGGCCATATTGGTGAAATCCTTGTAGCCTTGATTAGTGAGTTCTTTTCTCTGTGTCTTGTGCGCTACTGTACCAGATTATTCAAAGATGCCCTCTTGGAAATTGGAAGGTGTAATCGTTCCATACTGGGCAAAACATATGCTTCTCCTGTGCAACATGAACAATGACATATCTAGGCTATGTTGCTCGTGTCAAACCACCACCTAGGTTATCTTTTTTTTATTTTTTTTTAAGACGGAAGAAGTAAGGATGAATGTATACACACATGCTTGTCTATCATTCTTAAGATTTGAGTCTCTTGGGGACAGAGAGTAATCCATAGATTTAACTCAATTAGTCACTTGTGTCATGTCTGCACTCATAACTGTGCAGTTCCATCCTTGCCTTTCTGCAAGCAGCACACTAGTGAGTACTAGTGATCATGTGAGAAGAACCAAGTACCATTTTATATGGAAATTTAGTTGCAAAATATTTCAAGCCACTTGTATTTACACAGTTGGCTATCTTTATATATTGGCCAGTACACTCACGAGCAGCCTTTTCAAAGTCTGTTCAGTATAAAATCCAAGGTAAGATCACATATGGCCATTGCCCATTTGCCGTGTTTCATGCACAGCCCAGAGCTACTACAAACAGAAGACAACAAATGACACGGGGTTACATGTCCATCACATCAACTCAGTTACTGCTCAGTATTCGCTCACGGGCGGCATACTGCCAACGGAGTCTGCACATGCTTTGCCCTCACTTTTGCACCAATCATGCCTCTCGGTTACCCTCCAGAGAATGCAGAATATCGATCGAGCATTCCGGCTCCTATGCAGTCGTCAAAGTATTCTCTACAGTATAGTTTTCTCTCGCTATCCGACCGTACTTGACTATACTAGATCTCCTTGCTAGTAATATGTCACAGCTCACAATGTCATGCATGTGAGATTTTTTCGATCCAAGGGCTAGCTAGCTCTCCTAGCTACTCCTTCCGTTCCAAAGAAAAAAAAACCCAATTTTAAATTTAAAACTGGACACAACCTAATCTTGAGTTTAAACCTAAACCCAACTCATTGTGTTCAGGTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020799

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020799&oldid=43324"