BGIOSGA020867

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Revision as of 12:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020867| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020867, complete gene.| tag = OS06G06...")
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Gene Name

BGIOSGA020867

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020867, complete gene.

LocusTag

OS06G0621600

Ensembl Transcript ID

BGIOSGA020867-TA

Ensembl Protein ID

BGIOSGA020867-PA

Length

3654

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:26121472..26125125

Sequence Coding Region

26121687..26125125,26121472..26121581

Genome Context

<gbrowseImage1> name=IndicaChromosome06:26121472..26125125 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:26121472..26125125 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACTTTACCACTAGCCACTGGAGTTGGATGGGTAGTATCTCCTGTCATCAAGCTTATGTTTGAGAAGGTCCAATCATATATATCAACTCAGTACAAGTGGCAGTCCAATTTGGTGGATGACCTTAAAAAGCTGGAGACTATTTTAACTGAAATTCTCTTGGTAGTAGGCACTGCAGAAAGGCGGAGAACACTTGATTGCAATCAGCAAGCTTTACTCCGCCAGCTGAAAGATGCTGTCTACGATGCCGAGGACATCATGGATGAATTTGATTACATGTTTCTGAAAGCGAATGCTCAAAAGAGAAAGCTAAGAAGCTTAGGCTCCAGTTCTATCTCTATTGCCAAGCGTTTGGTTGGCCATGACAAGTTTCGGTCCAAATTGGGAAAGATGCTCAAAAGCTTGAGTACAGTAAAGGAATGTGCCCATATGCTCGTCAGGGTGATGGGAGTAGAAAACTTTAGTTCACACATGTTACCTGAGCCCCTTCAATGGCGTATCTCCAGCTCGATTTCAATTGGTGAGTTTGTAGTTGGTCGTCAGAAGGAACGGGAAGAACTAGTGCACCAACTGCTGGAACAATCTGACAAACCTGAATCTAGAAGCAAAGGAGCAAGGTCAACATCATTAGAGGTAATTACTATAGTCGGCAATGGCGGAATTGGAAAAACTACTTTAGCTCAACTTATTTACAATGATAAAAGAATCGAGGATAATTTTGATATGAGGGCATGGGTATGTGTATCACATGTCTTTGATAAGGTCAGAATCACCAAAGAAATCCTAACAACTATTGATAAAAGCATTGACCTAACGAATTTTAATTTTAGCATGCTGCAAGAAGAACTCAAGAACAAAATAACCATGAAGAAGTTTCTACTTGTATTGGATGATGTTTGGTATGATGAAAAGGTTGGGGTACCCATAAATGCTGATAGATGGAGAGAATTGTTTGCTCCTTTATGGCATGGGGCGAAAGTAATCAAGATTTTAGTTACAACTCGAATGGTTATTGTTGCAAATACATTAGGATGTGCCACTCCATTCTGTTTGAGTGGTCTAGAGAGTAAAGATAGCTGGGAACTTTTCAGAAGATGTGCATTTAGCACTAGAGATCCAAATGAACATCTCGAATTGAAGTCTATAGGTGAACACATTGTGCAAAAATTGAATGGATCGGCATTAGCTATAAAGGCTGTTGGTGGGCATCTTAGTTCAAACTTCAACTATGAAGAATGGAATCGAGTTCTAAAAAGTGGTCTATCGAATGAGAAAGATATTATGACAATTTTACGCCTAAGCTATGAATGCTTGCCAGAGCACCTTCAGCAATGCTTTTCTTTCTGTGGTTTGTTCCCAAAAGGTTATTATTTCGAGCCTGACATGTTGGTTAACATGTGGATAGCTCATGAATTTATTCAGGATCGTGGACGCACCTATGGAAGCTTGACAAGCACTGGGAAAAGTTATTTTGATGAGTTGTTATCAAGATCATTTTTCCAGGCACTTCGATATGGAGGTACAGTGCATTATGTTATGCATGACCTCATGAATGATCTTGCTGTCCACGTGTCCAATGGTAAGTGTTACAGAGTAGAAGCCAATGAACCTCAAGAGATTTTTCCAGAAGTTCAACATCGGTCTATACTGGCTGAAAGAGTTGACCTTCTTCGTGCCTGTAAGTTGCAAAGGCTGCGCACCCTAATAATTTGGAATAAAGAAAGATGTTATTGCTCACGAGTTTGTGTGGGAGTAGATTTTTTCAAAGAGTTCAAGAGCTTGAGATTATTGGATTTGACTGGTTGCTGCTTAAGATATTTGCCGGACTTAAATCACATGATACACCTTAGGTGCTTAATTCTCCCAAATACTAACCGTCCTCTACCTGATTCACTCTGCAGTCTTTACCATTTACAAATGTTGTTTCTACACCGGCATTCATGTTTTATATGTGCAAAACATGTCATCTTCCCCAAAAACCTGGATAACCTGAGCAATATTTTGACTATTGATGTTCATAGGGATCTTACTGTTGATTTGGCTTCTGTGGGGCATGTGCCATACCTCCGGGCTGCAGGGGAATTCTGTGTTGAGAAGAGGAAAGCGCAGGGGCTAGAGGTGCTGCATGACATGAATGAACTCCGAGGGTTTCTTATATTTACATCTCTCGAGAATGTGAAAAACAAGGATGAAGCAATTGATGCTCAGTTAGTCAACAAGAGTCAAATATCTAGGTTGGACCTACAATGGAGTTTTTCTAATGCAGATAGCCAATCTGACAAAGAATATGATGTGCTCAATGCTTTAACACCTCATCCTTGCCTTGAGGAATTGAATGTTGAAGGATACTCAGGCTGTACATCTCCATGTTGGCTGGAGTCCAAGTGGCTATCTAGATTGCAACACATCAGCATTCATGATTGCACATGTTGGAAGTTGCTTCCACCTTTAGGTCAGTTACCATCTCTCAGGGAACTTCATATTGATGGAATGAAATCATTAGAGTGCATCGGCACATCTTTCTATGGAGATGCTGGCTTTCCCTCCCTGAAAACACTAGAATTGACAGAATTGCCAGAATTGGCAGATTGGTCTTCAATCGATTATGCTTTTCCTGTTCTTCACGATGTACTCATCAGTAGGTGTCCAAAGCTGAAAGAACTGCCACCAGTCTTTCCTCCACCTGTAAAAATGGAAGTGCTCCCATCCACCATCGTTTACACACAGCATACTGATCATCGCCTGGACACATGTATTACTCAAAAGGAGGTTAGCTTAACTAGCCTTTCGGGTATTTTTCACGTATGTCACCAGGAATCTGTGGAAATTGCAGAAATTAGCTTTGACGGAGCAGACATGGTGAATGATGGGCTTAGAGATCTAGGCCCCAATCTTCCATCCCACCAAGGACCATTTATCTGCTGGTATGCTGATTTACACCGTGCGTTTGCGAGTTTAACAGAAATGAAAATTGTTGGTTGCCCCAACATAACATCGTTGTTGGACTTCAGATATTTTCCTGTCCTCAAGAACTTGATCATACAAGATTGCCCCGAATTGAATGAACTACAAGAGGATGGACACCTAACAACCTTGACAGAGGTTCTTATAGAGCACTGCAACAAACTGGTATCACTGAGGAGCTTGAGAAACCTTTCTTTCCTTTCCAAACTGGAGATCAGAAATTGCCTGAAGTTAGTGGCTTTGCCTGAGATGTTTGACTTCTTCTCCCTCAGAGTCATGATCATACACAAATGCCCTGAAATTGTTTCTTTACCGGAAGATGGTCTTCCTCTGACCCTTAAATTTTTGTATTTGAATGGATGCCATCCATTGCTAGAGGAGCAGTTTGAATGGCAACATGGTGTTGAGTGGGAGAAGTATGCCATGTTGCCGTCATGTTTGTTTGCTGGTGAATCGATAGGATATGGTCAAGATATAGCTGAGGAAATACTTCGCGAGAATGATATAATCCAGCGGTCAATTCAATCCAGTCTACTGCATCCAACTGATTCTTCAGCAAGTTCTTCCAGTTTTCTTCAGTAA</cdnaseq>

Protein Sequence

<aaseq>MATLPLATGVGWVVSPVIKLMFEKVQSYISTQYKWQSNLVDDLKKLETILTEILLVVGTAERRRTLDCNQQALLRQLKDAVYDAEDIMDEFDYMFLKANAQKRKLRSLGSSSISIAKRLVGHDKFRSKLGKMLKSLSTVKECAHMLVRVMGVENFSSHMLPEPLQWRISSSISIGEFVVGRQKEREELVHQLLEQSDKPESRSKGARSTSLEVITIVGNGGIGKTTLAQLIYNDKRIEDNFDMRAWVCVSHVFDKVRITKEILTTIDKSIDLTNFNFSMLQEELKNKITMKKFLLVLDDVWYDEKVGVPINADRWRELFAPLWHGAKVIKILVTTRMVIVANTLGCATPFCLSGLESKDSWELFRRCAFSTRDPNEHLELKSIGEHIVQKLNGSALAIKAVGGHLSSNFNYEEWNRVLKSGLSNEKDIMTILRLSYECLPEHLQQCFSFCGLFPKGYYFEPDMLVNMWIAHEFIQDRGRTYGSLTSTGKSYFDELLSRSFFQALRYGGTVHYVMHDLMNDLAVHVSNGKCYRVEANEPQEIFPEVQHRSILAERVDLLRACKLQRLRTLIIWNKERCYCSRVCVGVDFFKEFKSLRLLDLTGCCLRYLPDLNHMIHLRCLILPNTNRPLPDSLCSLYHLQMLFLHRHSCFICAKHVIFPKNLDNLSNILTIDVHRDLTVDLASVGHVPYLRAAGEFCVEKRKAQGLEVLHDMNELRGFLIFTSLENVKNKDEAIDAQLVNKSQISRLDLQWSFSNADSQSDKEYDVLNALTPHPCLEELNVEGYSGCTSPCWLESKWLSRLQHISIHDCTCWKLLPPLGQLPSLRELHIDGMKSLECIGTSFYGDAGFPSLKTLELTELPELADWSSIDYAFPVLHDVLISRCPKLKELPPVFPPPVKMEVLPSTIVYTQHTDHRLDTCITQKEVSLTSLSGIFHVCHQESVEIAEISFDGADMVNDGLRDLGPNLPSHQGPFICWYADLHRAFASLTEMKIVGCPNITSLLDFRYFPVLKNLIIQDCPELNELQEDGHLTTLTEVLIEHCNKLVSLRSLRNLSFLSKLEIRNCLKLVALPEMFDFFSLRVMIIHKCPEIVSLPEDGLPLTLKFLYLNGCHPLLEEQFEWQHGVEWEKYAMLPSCLFAGESIGYGQDIAEEILRENDIIQRSIQSSLLHPTDSSASSSSFLQ</aaseq>

Gene Sequence

<dnaseqindica>1..3439#3545..3654#ATGGCCACTTTACCACTAGCCACTGGAGTTGGATGGGTAGTATCTCCTGTCATCAAGCTTATGTTTGAGAAGGTCCAATCATATATATCAACTCAGTACAAGTGGCAGTCCAATTTGGTGGATGACCTTAAAAAGCTGGAGACTATTTTAACTGAAATTCTCTTGGTAGTAGGCACTGCAGAAAGGCGGAGAACACTTGATTGCAATCAGCAAGCTTTACTCCGCCAGCTGAAAGATGCTGTCTACGATGCCGAGGACATCATGGATGAATTTGATTACATGTTTCTGAAAGCGAATGCTCAAAAGAGAAAGCTAAGAAGCTTAGGCTCCAGTTCTATCTCTATTGCCAAGCGTTTGGTTGGCCATGACAAGTTTCGGTCCAAATTGGGAAAGATGCTCAAAAGCTTGAGTACAGTAAAGGAATGTGCCCATATGCTCGTCAGGGTGATGGGAGTAGAAAACTTTAGTTCACACATGTTACCTGAGCCCCTTCAATGGCGTATCTCCAGCTCGATTTCAATTGGTGAGTTTGTAGTTGGTCGTCAGAAGGAACGGGAAGAACTAGTGCACCAACTGCTGGAACAATCTGACAAACCTGAATCTAGAAGCAAAGGAGCAAGGTCAACATCATTAGAGGTAATTACTATAGTCGGCAATGGCGGAATTGGAAAAACTACTTTAGCTCAACTTATTTACAATGATAAAAGAATCGAGGATAATTTTGATATGAGGGCATGGGTATGTGTATCACATGTCTTTGATAAGGTCAGAATCACCAAAGAAATCCTAACAACTATTGATAAAAGCATTGACCTAACGAATTTTAATTTTAGCATGCTGCAAGAAGAACTCAAGAACAAAATAACCATGAAGAAGTTTCTACTTGTATTGGATGATGTTTGGTATGATGAAAAGGTTGGGGTACCCATAAATGCTGATAGATGGAGAGAATTGTTTGCTCCTTTATGGCATGGGGCGAAAGTAATCAAGATTTTAGTTACAACTCGAATGGTTATTGTTGCAAATACATTAGGATGTGCCACTCCATTCTGTTTGAGTGGTCTAGAGAGTAAAGATAGCTGGGAACTTTTCAGAAGATGTGCATTTAGCACTAGAGATCCAAATGAACATCTCGAATTGAAGTCTATAGGTGAACACATTGTGCAAAAATTGAATGGATCGGCATTAGCTATAAAGGCTGTTGGTGGGCATCTTAGTTCAAACTTCAACTATGAAGAATGGAATCGAGTTCTAAAAAGTGGTCTATCGAATGAGAAAGATATTATGACAATTTTACGCCTAAGCTATGAATGCTTGCCAGAGCACCTTCAGCAATGCTTTTCTTTCTGTGGTTTGTTCCCAAAAGGTTATTATTTCGAGCCTGACATGTTGGTTAACATGTGGATAGCTCATGAATTTATTCAGGATCGTGGACGCACCTATGGAAGCTTGACAAGCACTGGGAAAAGTTATTTTGATGAGTTGTTATCAAGATCATTTTTCCAGGCACTTCGATATGGAGGTACAGTGCATTATGTTATGCATGACCTCATGAATGATCTTGCTGTCCACGTGTCCAATGGTAAGTGTTACAGAGTAGAAGCCAATGAACCTCAAGAGATTTTTCCAGAAGTTCAACATCGGTCTATACTGGCTGAAAGAGTTGACCTTCTTCGTGCCTGTAAGTTGCAAAGGCTGCGCACCCTAATAATTTGGAATAAAGAAAGATGTTATTGCTCACGAGTTTGTGTGGGAGTAGATTTTTTCAAAGAGTTCAAGAGCTTGAGATTATTGGATTTGACTGGTTGCTGCTTAAGATATTTGCCGGACTTAAATCACATGATACACCTTAGGTGCTTAATTCTCCCAAATACTAACCGTCCTCTACCTGATTCACTCTGCAGTCTTTACCATTTACAAATGTTGTTTCTACACCGGCATTCATGTTTTATATGTGCAAAACATGTCATCTTCCCCAAAAACCTGGATAACCTGAGCAATATTTTGACTATTGATGTTCATAGGGATCTTACTGTTGATTTGGCTTCTGTGGGGCATGTGCCATACCTCCGGGCTGCAGGGGAATTCTGTGTTGAGAAGAGGAAAGCGCAGGGGCTAGAGGTGCTGCATGACATGAATGAACTCCGAGGGTTTCTTATATTTACATCTCTCGAGAATGTGAAAAACAAGGATGAAGCAATTGATGCTCAGTTAGTCAACAAGAGTCAAATATCTAGGTTGGACCTACAATGGAGTTTTTCTAATGCAGATAGCCAATCTGACAAAGAATATGATGTGCTCAATGCTTTAACACCTCATCCTTGCCTTGAGGAATTGAATGTTGAAGGATACTCAGGCTGTACATCTCCATGTTGGCTGGAGTCCAAGTGGCTATCTAGATTGCAACACATCAGCATTCATGATTGCACATGTTGGAAGTTGCTTCCACCTTTAGGTCAGTTACCATCTCTCAGGGAACTTCATATTGATGGAATGAAATCATTAGAGTGCATCGGCACATCTTTCTATGGAGATGCTGGCTTTCCCTCCCTGAAAACACTAGAATTGACAGAATTGCCAGAATTGGCAGATTGGTCTTCAATCGATTATGCTTTTCCTGTTCTTCACGATGTACTCATCAGTAGGTGTCCAAAGCTGAAAGAACTGCCACCAGTCTTTCCTCCACCTGTAAAAATGGAAGTGCTCCCATCCACCATCGTTTACACACAGCATACTGATCATCGCCTGGACACATGTATTACTCAAAAGGAGGTTAGCTTAACTAGCCTTTCGGGTATTTTTCACGTATGTCACCAGGAATCTGTGGAAATTGCAGAAATTAGCTTTGACGGAGCAGACATGGTGAATGATGGGCTTAGAGATCTAGGCCCCAATCTTCCATCCCACCAAGGACCATTTATCTGCTGGTATGCTGATTTACACCGTGCGTTTGCGAGTTTAACAGAAATGAAAATTGTTGGTTGCCCCAACATAACATCGTTGTTGGACTTCAGATATTTTCCTGTCCTCAAGAACTTGATCATACAAGATTGCCCCGAATTGAATGAACTACAAGAGGATGGACACCTAACAACCTTGACAGAGGTTCTTATAGAGCACTGCAACAAACTGGTATCACTGAGGAGCTTGAGAAACCTTTCTTTCCTTTCCAAACTGGAGATCAGAAATTGCCTGAAGTTAGTGGCTTTGCCTGAGATGTTTGACTTCTTCTCCCTCAGAGTCATGATCATACACAAATGCCCTGAAATTGTTTCTTTACCGGAAGATGGTCTTCCTCTGACCCTTAAATTTTTGTATTTGAATGGATGCCATCCATTGCTAGAGGAGCAGTTTGAATGGCAACATGGTGTTGAGTGGGAGAAGTATGCCATGTTGCCGTCATGTTTGTTTGCTGGTGAATCGATAGGATATGGTCAAGGTAATTCACAGCAGCTTGAATTTTGAAAAGGATAGGTCTAGCAATTATTTGTTGCAAAAATATTACCACAATCCACTGATTTGTGTTAGTGCCAACCTATTGCAGATATAGCTGAGGAAATACTTCGCGAGAATGATATAATCCAGCGGTCAATTCAATCCAGTCTACTGCATCCAACTGATTCTTCAGCAAGTTCTTCCAGTTTTCTTCAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020867