BGIOSGA020885

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Revision as of 12:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020885| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020885, complete gene.| tag = OsI_237...")
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Gene Name

BGIOSGA020885

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020885, complete gene.

LocusTag

OsI_23708

Ensembl Transcript ID

BGIOSGA020885-TA

Ensembl Protein ID

BGIOSGA020885-PA

Length

3213

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25937225..25940437

Sequence Coding Region

25940345..25940437,25940045..25940260,25939505..25939753,25938769..25938912,25938481..25938645
,25938136..25938205,25937961..25938042,25937225..25937405

Genome Context

<gbrowseImage1> name=IndicaChromosome06:25937225..25940437 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:25937225..25940437 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCAAGGCGGCGGCGCTCTCCTCCTCCCCGTTCGTCTCCTCCCGCCGCCTCTCCTCCCCCGCGGCGTCTCTCCGCGCCCGCACGCCGAGGTGCGTGATGGGGAGCGAGCAGGTGAGGGTGGTGGTGGAGGAGGAAGGGAAGACGAAGAAGAGGATGGGGGTGGCGGAGCCGAGGAGCGCGCCCCCCGCGGTGTGGACGCCGCGGGCGCCCGCGCAGGAGGCGAGGCTCGCCGCGCTGCGCACCGATGGGCGGGATTCCAGGTTGAAGATCTTCTCCGGCACGGCCAATCGCCCCCTCGCGCAGGAAATTGCTTCTTACTTGGGTGTAGACCTGGGTAAGGTCCTCATCAAGCGTTTTGCCGATGGGGAAATCTACGTGCAGCTGCAGGAGAGTGTGAGGGGTTGCGATGTGTTCTTGGTGCAGCCCACCTGCTCCCCTGTTAATGAAAACCTTATGGAGCTTTTTGTCATGATCGACGCATGTCGGCGGGCGTCGGCGAGGTCTATTACTGTTGTCATTCCATACTTTGGGTATGCCAGAGCTGACAGAAAGGCTCAAGGACGTGAGGCCATTACTGCCAAACTTTCTGCTAATTTACTTACAGAAGCTGGGAGTGATCGTGTAATTGTATGTGATATTCATTCCACTCAAGCATTGGGATACTTCGATATTCCTGTGGATCATATACATGGACAGCCTGTGATTCTGGATTACCTTGCCAGTAAGACAATATCTAAGGATCTTGTGGTGGTTTCTCCTGATGTGGGTGGTGTTGTCAGAGCACGTGCATTTGCTAAGAAATTATCTGATGCCCCTTTAGCTATCGTTGATAAGAGAAGACAGGGTCACAACATGTCAGAGGTCATGCACTTAATTGGTGATGTGAAGGGTAAGGTCGCCATCATGGTTGATGATATGATAGACACAGCAGGAACAATTACTAGTGCAGCTGCTTTGTTAAAACAGGAGGGAGCAGAGGCTGTCTATGCTTGTAGCACACATGCTGTCTTCAGCCCTCCTGCGATTGAAAGGCTCTCTGGAGGCATCTTTGAGGAAGTTATTGTGACAAACTCCATTCTGCTGCCAGAGCACAAATGCTTCCCCCAGTTGACAGTGCTCTCAATGGCGAACCTTGTGGCAGAAACAATCTGGCATGTTCATCGCGATGGCTCTGTGAGCAGCATATTTCAATAG</cdnaseq>

Protein Sequence

<aaseq>MAAKAAALSSSPFVSSRRLSSPAASLRARTPRCVMGSEQVRVVVEEEGKTKKRMGVAEPRSAPPAVWTPRAPAQEARLAALRTDGRDSRLKIFSGTANRPLAQEIASYLGVDLGKVLIKRFADGEIYVQLQESVRGCDVFLVQPTCSPVNENLMELFVMIDACRRASARSITVVIPYFGYARADRKAQGREAITAKLSANLLTEAGSDRVIVCDIHSTQALGYFDIPVDHIHGQPVILDYLASKTISKDLVVVSPDVGGVVRARAFAKKLSDAPLAIVDKRRQGHNMSEVMHLIGDVKGKVAIMVDDMIDTAGTITSAAALLKQEGAEAVYACSTHAVFSPPAIERLSGGIFEEVIVTNSILLPEHKCFPQLTVLSMANLVAETIWHVHRDGSVSSIFQ</aaseq>

Gene Sequence

<dnaseqindica>1..93#178..393#685..933#1526..1669#1793..1957#2233..2302#2396..2477#3033..3213#ATGGCGGCCAAGGCGGCGGCGCTCTCCTCCTCCCCGTTCGTCTCCTCCCGCCGCCTCTCCTCCCCCGCGGCGTCTCTCCGCGCCCGCACGCCGGTGAGTGAGCGGGGTGATTCGATGTCGATTGGCGCGCGAGGGCGCGGTTTGTGATTTTTGGTTTTTGTTTTTGTGTGTGCGTAGAGGTGCGTGATGGGGAGCGAGCAGGTGAGGGTGGTGGTGGAGGAGGAAGGGAAGACGAAGAAGAGGATGGGGGTGGCGGAGCCGAGGAGCGCGCCCCCCGCGGTGTGGACGCCGCGGGCGCCCGCGCAGGAGGCGAGGCTCGCCGCGCTGCGCACCGATGGGCGGGATTCCAGGTTGAAGATCTTCTCCGGCACGGCCAATCGCCCCCTCGCGCAGGTTGCTTTTTGCCCCTGTTACTGTTACATACTCCTAGTAAAATTCATGAACCAGAGTTTTTTTTTTGTTTCATCTCCAATTTTATAAGGGAGTACAGCTTTGTACGGTCTCTTGTTTTGTATGCGATTGGCTGGGATAATTTGATAATTGCATAATTGTATTTGAGTTTGGCTCGGCTGCACCTTTTGTGCTATGGATTGGTATGTGTGTTATCCACGATGGATATGAAGGCGACCTTTTTGGACCTTAGTTCTGAAAATTTTGTTTTTGTTTTTTAGTTTCGTTTTGCAGGAAATTGCTTCTTACTTGGGTGTAGACCTGGGTAAGGTCCTCATCAAGCGTTTTGCCGATGGGGAAATCTACGTGCAGCTGCAGGAGAGTGTGAGGGGTTGCGATGTGTTCTTGGTGCAGCCCACCTGCTCCCCTGTTAATGAAAACCTTATGGAGCTTTTTGTCATGATCGACGCATGTCGGCGGGCGTCGGCGAGGTCTATTACTGTTGTCATTCCATACTTTGGGTATGCCAGAGCTGACAGAAAGGTATGTATAAACTCTTAATTGATGGCTGTTGCGGTATGCCAAGTGTGTTTGTACTGATCATCATGCAATTTCATTTTTACTGGATATCTTCTTCCCTTATCGTGGTAGCTAATTTGTTACTGTCCCATTTCTAGTGGATGTAACCCTTTTCCTTGTCTAAGATTTTTGCTATTGTGGTGTACTTAAATTTATTACACACTGACACTGCTGGTACTAAAGGGGGTCAAAATTAACGTTCAGATGATACTACAGAAGCCATTAAGCACGCAGATTGGTGGTGATAGTGTTTATTATGCTTTTTACAAATCCTGACAAGAAAAGCATAATTACAGAAATCAGAATATGACCATATCTTCTACCTGTTTACTTGCTACAAGCACCTTTTCTCTGCCATTTTCTGTTATCTCTGCTTCAGCAATGTGCTCGCTGGACCCCTTATGGATTTTCCCTTCCAAACATTAGCAATTCCTTTTGCTTTATTATGTTGGCTGAATCTGTTGAACACTATTTGCAATGTTTCATGACCACTGTTTCTCCCTCATGTGAATGCACTTTTGTTTTCATGAACTAAGTTGATTCTTTTGTAGTGTAGGCTCAAGGACGTGAGGCCATTACTGCCAAACTTTCTGCTAATTTACTTACAGAAGCTGGGAGTGATCGTGTAATTGTATGTGATATTCATTCCACTCAAGCATTGGGATACTTCGATATTCCTGTGGATCATATACATGGACAGGTACTCTTAACAGACCAAGATATGTTCCTTTTATTACCTAAATGCTGTTTTCAGTTGTACGCAATTTTCTTAGCTGGATCTGAGTTGGCAGCAAAGTAACGATTGAATCTTTGTTATATGTAGCCTGTGATTCTGGATTACCTTGCCAGTAAGACAATATCTAAGGATCTTGTGGTGGTTTCTCCTGATGTGGGTGGTGTTGTCAGAGCACGTGCATTTGCTAAGAAATTATCTGATGCCCCTTTAGCTATCGTTGATAAGAGAAGACAGGGTCACAACATGTCAGAGGTTGGAACAAGTTTCCTTGAATTTGATCTACTCCAATTTTGAAGTTACACCTACACATTTCATCTCTGCTGCATAGGCTGAAAGTAGGATAAAAAGCAACTTTTCTGATTACCCGACAATTAATTAATACAGTTAGATGCTTTACTGAACCCAGCCATCCTCTTATTGATTTTGCCATGATTTTTGGGCAACTACTTGCAATTCATGGTTCACAACTTAGATGTATGAGGCTGCTAAATAGTAATCTGGAATTTCCTATTGCTGGCCATCTGCAGGTCATGCACTTAATTGGTGATGTGAAGGGTAAGGTCGCCATCATGGTTGATGATATGATAGACACAGCAGGTTAGCATCTTTTCATAATGGTAAGATTCTGCATATTTTGTAGTGCGCTCGTTCAATTATTAATCTCATTTTTTTTCTTTTAATACATCCCAGGAACAATTACTAGTGCAGCTGCTTTGTTAAAACAGGAGGGAGCAGAGGCTGTCTATGCTTGTAGCACACATGCTGTCTTCAGGTTTGGCAGTTGGTTTATTGTAACATCCATGATCCATGTAATAGTATTGGTTCATTGGCTTGTTGCGAAGGAACCACGTTATGGCATGATTAGGCAGATTGGCTTTATGTTTGATCAATATAAAAATGACAGGGTAGAGCAATAATTTTACTAGATTCCACTTGAGCACACCAATCACTTAGTGCTAGTAAGTGGGAGTCTGGAAAAGAGGTTGGCTTTAATCTAGTTGAGTGCGGATCTGGTTCTTGTTGACTCTATTTCATTAGTAGTCATGAATCTGTGCCACACATATCAGCATATGTTTTTCTGGCTATTTTGATTTAGGAAGGGACCTCAAGTCCTCAATTGAAGTCTTGAATTTTATTAGCATCAACATGCATGATGTCTTTTTACATGGTACCGCACAGTAATTTGACTTCAAAATAATAGCAGGATGTGTTGCCACTTACTTCATTTGCAAAAATTGTTGTCCTTTTGTATTCCTGCACTATTTTGTAGGCATAAAAGTAAGTCGTTTACCACACCTACTTTTTCCCACTAACACTGTCTTTGCAGCCCTCCTGCGATTGAAAGGCTCTCTGGAGGCATCTTTGAGGAAGTTATTGTGACAAACTCCATTCTGCTGCCAGAGCACAAATGCTTCCCCCAGTTGACAGTGCTCTCAATGGCGAACCTTGTGGCAGAAACAATCTGGCATGTTCATCGCGATGGCTCTGTGAGCAGCATATTTCAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020885