BGIOSGA020896

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Revision as of 12:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020896| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020896, complete gene.| tag = OsI_236...")
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Gene Name

BGIOSGA020896

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020896, complete gene.

LocusTag

OsI_23690

Ensembl Transcript ID

BGIOSGA020896-TA

Ensembl Protein ID

BGIOSGA020896-PA

Length

2740

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25574673..25577412

Sequence Coding Region

25577158..25577412,25576910..25577107,25576737..25576808,25576502..25576597,25576190..25576269
,25576041..25576116,25575736..25575946,25575430..25575626,25575220..25575325
,25575032..25575121,25574673..25574692

Genome Context

<gbrowseImage1> name=IndicaChromosome06:25574673..25577412 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:25574673..25577412 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGGGCGAGCACGCACAACGGCACGCTCGCCGGCAAGATGGCGGCGGTGGTGGACGCGCTGCACGACTGCCAGGCGGCGGCCGGCACCGGCTACCTCTCCGCCTTCCCCGCCGAGTTCTTCGACCGCTTCGAGGCCATCCGCCCCGTCTGGGCGCCCTACTACACCATCCACAAGGCACGCAACGCAACCCAAAGCATCTGCATCTCCACCATGGCCATGAATCTCATCTGTTCGTGCAAATGTCTGAATGAAATCATGCAGGGCCTGCTGGATCAGCACACGGTGGCCGGGAACGGCAGGGCGCTCGGCATGGTGGTCGCCATGGCCGACTACTTCGCCGGCCGCGTGAGGAGCGTCATCCAGAGGTACACCATCGAGAGGCACTGGACGTCGCTCAACGAGGAGACCGGCGGGATGAACGACGTCCTCTACCAGCTGTACACCATTACTAAAGACCAGAGGCATTTGGTGCTGGCTCATCTTTTCGACAAGCCTTGCTTTCTAGGATTGCTTGCAGTTCAGGCTGACAGTCTTTCGGGTTTTCATGCAAATACACACATTCCTGTTGTCATCGGTGGGCAAATGAGATATGAAGTTACTGGTGATCCTCTTTACAAGGAGATTGCAACATTCTTCATGGACATAGTTAATTCTTCTCATAGCTATGCCACTGGTGGCACATCTGTCAGTGAGTTCTGGTCAAATCCAAAACATTTAGCTGAGGCTCTAACCACTGAGACTGAGGAGTCCTGTACTACCTACAACATGCTTAAGGTTTCTCGCCACCTATTCAGATGGACAAAGGAAATTGCGTATGCAGATTACTACGAGCGAGCACTGATAAATGGTGTCCTAAGCATTCAGAGAGGAAGAGATCCTGGTGTGATGATCTACATGCTACCCCAGGGCCCTGGAAGATCTAAAGCAGTAAGCTACCATGGGTGGGGAACACAGTACAATTCATTTTGGTGTTGTTATGGAACTGGGATAGAATCATTCTCCAAGCTGGGGGATTCTATCTACTTTGAGCAGAAAGGAGACAAGCCAGGGCTCTACATTATTCAGTACATACCGAGCACATTTAACTGGAGAACTGCAGGTCTTACTGTTACTCAACAAGTGAAGCCCCTCAGCTCATCAGATCAGTATCTTCAAGTCTCACTTTCCATTTCTGCTGCAAAGACAAACGGGCAATATGCAACACTGAATGTGAGAATACCATCATGGACATCAATGAATGGTGCAAAAGCAACTCTGAATGACAAAGATCTGCAATTAGCATCTCCAGGGACTTTCCTCACAATCAGCAAGCAGTGGGATAGTGGTGATCACTTGCTACTCCAGTTCCCAATTAACCTAAGGACAGAAGCAATAAAAGATCACCTCTACCTTGTTTAA</cdnaseq>

Protein Sequence

<aaseq>MWASTHNGTLAGKMAAVVDALHDCQAAAGTGYLSAFPAEFFDRFEAIRPVWAPYYTIHKARNATQSICISTMAMNLICSCKCLNEIMQGLLDQHTVAGNGRALGMVVAMADYFAGRVRSVIQRYTIERHWTSLNEETGGMNDVLYQLYTITKDQRHLVLAHLFDKPCFLGLLAVQADSLSGFHANTHIPVVIGGQMRYEVTGDPLYKEIATFFMDIVNSSHSYATGGTSVSEFWSNPKHLAEALTTETEESCTTYNMLKVSRHLFRWTKEIAYADYYERALINGVLSIQRGRDPGVMIYMLPQGPGRSKAVSYHGWGTQYNSFWCCYGTGIESFSKLGDSIYFEQKGDKPGLYIIQYIPSTFNWRTAGLTVTQQVKPLSSSDQYLQVSLSISAAKTNGQYATLNVRIPSWTSMNGAKATLNDKDLQLASPGTFLTISKQWDSGDHLLLQFPINLRTEAIKDHLYLV</aaseq>

Gene Sequence

<dnaseqindica>1..255#306..503#605..676#816..911#1144..1223#1297..1372#1467..1677#1787..1983#2088..2193#2292..2381#2721..2740#ATGTGGGCGAGCACGCACAACGGCACGCTCGCCGGCAAGATGGCGGCGGTGGTGGACGCGCTGCACGACTGCCAGGCGGCGGCCGGCACCGGCTACCTCTCCGCCTTCCCCGCCGAGTTCTTCGACCGCTTCGAGGCCATCCGCCCCGTCTGGGCGCCCTACTACACCATCCACAAGGCACGCAACGCAACCCAAAGCATCTGCATCTCCACCATGGCCATGAATCTCATCTGTTCGTGCAAATGTCTGAATGAAGTCATGAAGATCTCCTGTGCCTTTCTTCTTCCTCTGCATCGCGTGTGCAGATCATGCAGGGCCTGCTGGATCAGCACACGGTGGCCGGGAACGGCAGGGCGCTCGGCATGGTGGTCGCCATGGCCGACTACTTCGCCGGCCGCGTGAGGAGCGTCATCCAGAGGTACACCATCGAGAGGCACTGGACGTCGCTCAACGAGGAGACCGGCGGGATGAACGACGTCCTCTACCAGCTGTACACCATTACTGTAATCGTTCTTGTCAATCTTGATTTGTGCTGATTGGAAGCACGTTTTATTTCAGCGAGTTAATTGTGTTGCTATTATGAATGATCTCCAATTTTGGGCAGAAAGACCAGAGGCATTTGGTGCTGGCTCATCTTTTCGACAAGCCTTGCTTTCTAGGATTGCTTGCAGTTCAGGTCTGAAGATCTTAATTCCCCTATGGCACTCTATGTTCTCCTACATGCTATTCACTTTGTAATTAGTAATTTATTGTACAACTAATCCAGCTAGAACTCGTAATCTGACAGAATATAACTCGTAATCTTTGATGTTCAGGCTGACAGTCTTTCGGGTTTTCATGCAAATACACACATTCCTGTTGTCATCGGTGGGCAAATGAGATATGAAGTTACTGGTGATCCTCTTTACAAGGTAAAACTTATGGGGCATGTTGATTTCAAGAGAGAAGAGACACACATGGTCCATGGTACTTCATGATTTTGCTACTATAATCCACTTCTATGGGTGTCCGTTATAGTTTTACTGAAAAGCTACTATGTCTTGCAGTGTGTGCTTTCTTGCAAATAATTGTACACTTCAATACTTGTGGTGAAACTTGAATGAATCTTGGTGCATCTGACCATAAGTCCTATTTATGAAACAGGAGATTGCAACATTCTTCATGGACATAGTTAATTCTTCTCATAGCTATGCCACTGGTGGCACATCTGTCAGTGAGTTCTGGTAATGAACTTGAATGGTTGAAGTTCACAGAAATCTTTTTCGGTCACTTAATGCCCAAAATGGATTTTGTCAGGTCAAATCCAAAACATTTAGCTGAGGCTCTAACCACTGAGACTGAGGAGTCCTGTACTACCTACAACATGCTTAAGGTGATTTATTTGTTCATGATCATCAATGATCAAATTCCTAAGTCCATTTTTCTTTCCTAGAATTAGATACAAAGTGAAAATACAAAGTATGCAGGTTTCTCGCCACCTATTCAGATGGACAAAGGAAATTGCGTATGCAGATTACTACGAGCGAGCACTGATAAATGGTGTCCTAAGCATTCAGAGAGGAAGAGATCCTGGTGTGATGATCTACATGCTACCCCAGGGCCCTGGAAGATCTAAAGCAGTAAGCTACCATGGGTGGGGAACACAGTACAATTCATTTTGGTGTTGTTATGGAACTGGTAAGTGAACAGTTAGTTTCAGAAGTTCAGAACTGAACAGTATAATGTTAAGTGCTCTGAAAAAACAAGTAGGATTGTAATGTTATCTACTGTCTGGTTTTATTTTCAGGGATAGAATCATTCTCCAAGCTGGGGGATTCTATCTACTTTGAGCAGAAAGGAGACAAGCCAGGGCTCTACATTATTCAGTACATACCGAGCACATTTAACTGGAGAACTGCAGGTCTTACTGTTACTCAACAAGTGAAGCCCCTCAGCTCATCAGATCAGTATCTTCAAGTCTCACTTTCCATTTCTGCTGCAAAGGTAAAATTTATCTTGGATTTTCACTGTATGAGAGAGAGAGAGAGAGAAATCAACAATGATTAGTCTTGGATCATAGTTTAATCAGTTTGATTTTTGTGACACAGACAAACGGGCAATATGCAACACTGAATGTGAGAATACCATCATGGACATCAATGAATGGTGCAAAAGCAACTCTGAATGACAAAGATCTGCAATTAGCATCTCCAGGTATGCTCATAAGAATTGAGAGAGCACGGTAATTTGTCGCCCATAATATGTTGGAAGAACTACAGATATAACTCTGCCTCAATCTCGATCTTATTCAGGGACTTTCCTCACAATCAGCAAGCAGTGGGATAGTGGTGATCACTTGCTACTCCAGTTCCCAATTAACCTAAGGACAGAAGCAATAAAAGGTATGGAATTTTGAGTTTTATTTTCTATTCAGCTTGAAGAAATAAATCAAAGGTTTATCGATCAGTAACAAAGCCCACACACAACAATATATCAAAGCAATCGAATACTACTTGCTTTCCCTACTTCAACAGACCAGTATCCAGAAGTCAGAATCAGTACTATCCAGTGATTTTGCATTTCACCAACATTTCGGTGAATTTGGGCTTTACTATCGGTACAAGAAATGTTCATACCTGCCAAAATTTTATCCCAAATTCTAATATTGAATTCAGTGTCAATTCTAAGTTGACAATCAATTAATTGTTTTCACATCTATTTTACTTATGTTCATTATCCAGATCACCTCTACCTTGTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020896