BGIOSGA020897

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Revision as of 12:53, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020897| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020897, complete gene.| tag = P0429G0...")
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Gene Name

BGIOSGA020897

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020897, complete gene.

LocusTag

P0429G06.10

Ensembl Transcript ID

BGIOSGA020897-TA

Ensembl Protein ID

BGIOSGA020897-PA

Length

6053

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25478064..25484116

Sequence Coding Region

25482926..25484116,25482570..25482815,25482396..25482473,25482202..25482302,25481917..25482112
,25481709..25481834,25481440..25481625,25480649..25480762,25480050..25480202
,25479230..25479418,25479060..25479137,25478852..25478977,25478665..25478763
,25478268..25478385,25478064..25478158

Genome Context

<gbrowseImage1> name=IndicaChromosome06:25478064..25484116 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:25478064..25484116 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGCGCGCACGCCGCCTCGCCAACCGCGCGCTGCTGCGCCGCCTCCTCGCGGCGGCGACGGCGGAGTCCCCGGCGGCCCCGTCCCGCGGCATCTCGACCCTGGCCAAGGGGTCGCGCCCGCGCGCCCCCCCACGCCCGGCGCCCCACCAGTACACCACGGGGCGGCGGCCCGTGTCGGCGTCGGCGCTGCAGCCGAGCGACACGTTCCCGCGGCGGCACAACTCGGCGACGCCGGCGGAGCAGGCGGCGATGGCGTCGGAGTGCGGGTTCGGCACCGTCGACGCGCTCATCGACGCCACCGTCCCGGCCGCCATCCGCGCGCCGGAGATGCGTTTCTCCGGGAGGTTCGACGCCGGGTTCACCGAGTCCGAGATGATCGAGCACATGCAGCGCCTCGCCGCCATGAACAGGGCCTACAAGTCCTTCATCGGGATGGGGTACTACAACACCCACGTCCCCGCGGTGATCCTGCGCAACCTCATGGAGAACCCGGCGTGGTACACGCAGTACACGCCGTACCAGGCGGAGATCGCGCAGGGTCGCCTCGAGTCGCTGCTCAACTACCAGACCATGGTCGCCGACCTCACCGGCCTCCCCATGTCCAACGCCTCGCTGCTCGACGAGGCCACCGCCGCCGCCGAGGCCATGGCCATGTGCAACGGCATCCTCAAGTCCAAGAAGAAGACCTTCCTCATCGCCTCCAACTGCCACCCGCAGACCATCGACGTGTGCCAGACGCGCGCCGCCGGGTTCGACCTCAACGTCGTCGTCGCGGACGCCAAGGACTTCGACTACGGCAGCGGCGACGTGTGCGGGGTGCTCGTGCAGTACCCCGGCACGGAGGGGGAGGTGCTGGACTACGCGGAGTTCGTCAGGGACGCGCACGCGCACGGCGTCAAGGTGGTCATGGCCACCGACCTGCTCGCGCTCACCTCGCTGCGCCCGCCCGGCGAGATCGGTGCCGACATCGCCGTCGGCTCCGCGCAGCGGTTCGGCGTGCCCATGGGGTACGGCGGCCCGCACGCCGCGTTCCTCGCCACGTCCCAGGAGTACAAGCGCCTCATGCCCGGCCGCATCATCGGCGTCAGCGTCGATTCCAGCGGCAAGCCCGCGCTCCGGATGGCGATGCAGACCCGGGAGCAGCACATCCGCCGCGACAAGGCCACCAGCAACATCTGCACTGCCCAGGCCTTGCTCGCCAACATGGCAGCGATGTATGCTGTCTACCATGGTCCCGAGGGGCTAAAGGCAATTGCCGACCGTGTACATGGACTGGCTGGTACATTTGCCCAAGGATTGAAGAAGCTCGGAACAGTGACGGTGCAGGAGCTGCCCTTCTTCGACACTGTCAAGGTCAAGGTCGCTGACGCGAATGCGATTGCCCAGGAGGCCTGCAAGAACGAGATGAACCTTCGTGTCGTTGATGCAACCACGATAACCGTTGCCTTTGATGAGACCACAACCTTGGAGGATGTCGACAAGCTGTTCAAGGTGTTCAATGGTGGCAAGCCAGTGAACTTCACTGCTGAATCCCTCGCACCAGAGGTCTCAAGCTCAATTCCGAGTAGCCTTGTGCGCAAGAGCCCCTACTTAACCCACCCGATCTTTAACATGTACCATACAGAGCATGAGCTTCTCCGCTACCTGTACAAGTTGCAATCCAAGGACCTTTCACTGTGCCACAGTATGATCCCTCTTGGTTCTTGCACTATGAAACTAAATGCTACAGTGGAGATGATGCCTGTCACCTACCCCAACTTTGCAAACATGCACCCATTTGCACCTACTGACCAAGCCGCAGGATATCATGAAATGTTTGATGACTTGGGCGATCTGCTGTGCAAGATCACTGGCTTTGATTCTTTCTCTTTGCAACCAAATGCTGGTGCTTCAGGGGAGTATGCCGGATTGATGGTTATCCGTGCTTACCACAGGGCAAGAGGAGACTACCACCGGGATGTCTGTATCATTCCTGTGTCAGCCCATGGTACAAATCCTGCAAGTGCTGCTATGTGTGGAATGAAGATTGTTGCTGTTGGAACTGATTCCAAAGGTAACATTAACATCGAGGAGTTGAGGAAAGCTGCTGAAGCAAACAAGGACAACTTGGCTGCTCTTATGGTTACCTATCCTTCGACCCATGGAGTCTATGAAGAAGGCATTGATGAGATATGCATGATAATTCATGAGAACGGTGGGCAGGTCTACATGGATGGAGCTAACATGAATGCTCAGGTCGGATTGACAAGCCCTGGCTTTATTGGAGCAGATGTTTGCCACCTTAACCTTCACAAGACATTCTGCATTCCACATGGTGGGGGTGGTCCTGGAATGGGTCCTATTGGTGTTAAGAAGCACTTAGCACCATTTTTACCATCTCATCCAGTGATCACCACCGGTGGCTTCCCTCTCCCTGAGAAAACCGACCCTCTTGGTACCATTTCTGCTGCCCCATGGGGATCAGCGTTGATTCTACCAATTTCCTACACATACATAGCCATGATGGGTTCTAAGGGTCTCACTGATGCTTCAAAGATTGCAATCTTGAATGCAAACTACATGACAAAGCGTCTGGAGAAACACTACCCAGTTCTTTTCCGTGGAGTCAATGGAACTGTTGCCCATGAGTTCATTATTGATTTAAGAGGATTTAAGACGACTGCTGGTATAGAGCCAGAGGATGTTGCAAAGCGTTTGATGGACTATGGATTCCATGCACCTACTATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGGCCGAACTCGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATTGCAGAGATAGAAAGTGGCAAAGCAGATGTGAACAACAACGTCCTCAAGAGTGCTCCTCACCCGCCCCAACTTCTGATGAGCGACTCATGGACTAAGCCGTACTCCAGGGAGTATGCTGCGTTCCCTGCAGCGTGGCTTCGGGGCGCCAAGTTCTGGCCAACAACATGTCGCGTGGACAATGTGTACGGGGATCGCAACCTCATCTGCACTCTGCAACAGGGATCCCAAGTCGCAGAAGAAGCTGCAGCTGCTACCGCATGA</cdnaseq>

Protein Sequence

<aaseq>MERARRLANRALLRRLLAAATAESPAAPSRGISTLAKGSRPRAPPRPAPHQYTTGRRPVSASALQPSDTFPRRHNSATPAEQAAMASECGFGTVDALIDATVPAAIRAPEMRFSGRFDAGFTESEMIEHMQRLAAMNRAYKSFIGMGYYNTHVPAVILRNLMENPAWYTQYTPYQAEIAQGRLESLLNYQTMVADLTGLPMSNASLLDEATAAAEAMAMCNGILKSKKKTFLIASNCHPQTIDVCQTRAAGFDLNVVVADAKDFDYGSGDVCGVLVQYPGTEGEVLDYAEFVRDAHAHGVKVVMATDLLALTSLRPPGEIGADIAVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKAIADRVHGLAGTFAQGLKKLGTVTVQELPFFDTVKVKVADANAIAQEACKNEMNLRVVDATTITVAFDETTTLEDVDKLFKVFNGGKPVNFTAESLAPEVSSSIPSSLVRKSPYLTHPIFNMYHTEHELLRYLYKLQSKDLSLCHSMIPLGSCTMKLNATVEMMPVTYPNFANMHPFAPTDQAAGYHEMFDDLGDLLCKITGFDSFSLQPNAGASGEYAGLMVIRAYHRARGDYHRDVCIIPVSAHGTNPASAAMCGMKIVAVGTDSKGNINIEELRKAAEANKDNLAALMVTYPSTHGVYEEGIDEICMIIHENGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVITTGGFPLPEKTDPLGTISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMTKRLEKHYPVLFRGVNGTVAHEFIIDLRGFKTTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAEIESGKADVNNNVLKSAPHPPQLLMSDSWTKPYSREYAAFPAAWLRGAKFWPTTCRVDNVYGDRNLICTLQQGSQVAEEAAAATA</aaseq>

Gene Sequence

<dnaseqindica>1..1191#1302..1547#1644..1721#1815..1915#2005..2200#2283..2408#2492..2677#3355..3468#3915..4067#4699..4887#4980..5057#5140..5265#5354..5452#5732..5849#5959..6053#ATGGAGCGCGCACGCCGCCTCGCCAACCGCGCGCTGCTGCGCCGCCTCCTCGCGGCGGCGACGGCGGAGTCCCCGGCGGCCCCGTCCCGCGGCATCTCGACCCTGGCCAAGGGGTCGCGCCCGCGCGCCCCCCCACGCCCGGCGCCCCACCAGTACACCACGGGGCGGCGGCCCGTGTCGGCGTCGGCGCTGCAGCCGAGCGACACGTTCCCGCGGCGGCACAACTCGGCGACGCCGGCGGAGCAGGCGGCGATGGCGTCGGAGTGCGGGTTCGGCACCGTCGACGCGCTCATCGACGCCACCGTCCCGGCCGCCATCCGCGCGCCGGAGATGCGTTTCTCCGGGAGGTTCGACGCCGGGTTCACCGAGTCCGAGATGATCGAGCACATGCAGCGCCTCGCCGCCATGAACAGGGCCTACAAGTCCTTCATCGGGATGGGGTACTACAACACCCACGTCCCCGCGGTGATCCTGCGCAACCTCATGGAGAACCCGGCGTGGTACACGCAGTACACGCCGTACCAGGCGGAGATCGCGCAGGGTCGCCTCGAGTCGCTGCTCAACTACCAGACCATGGTCGCCGACCTCACCGGCCTCCCCATGTCCAACGCCTCGCTGCTCGACGAGGCCACCGCCGCCGCCGAGGCCATGGCCATGTGCAACGGCATCCTCAAGTCCAAGAAGAAGACCTTCCTCATCGCCTCCAACTGCCACCCGCAGACCATCGACGTGTGCCAGACGCGCGCCGCCGGGTTCGACCTCAACGTCGTCGTCGCGGACGCCAAGGACTTCGACTACGGCAGCGGCGACGTGTGCGGGGTGCTCGTGCAGTACCCCGGCACGGAGGGGGAGGTGCTGGACTACGCGGAGTTCGTCAGGGACGCGCACGCGCACGGCGTCAAGGTGGTCATGGCCACCGACCTGCTCGCGCTCACCTCGCTGCGCCCGCCCGGCGAGATCGGTGCCGACATCGCCGTCGGCTCCGCGCAGCGGTTCGGCGTGCCCATGGGGTACGGCGGCCCGCACGCCGCGTTCCTCGCCACGTCCCAGGAGTACAAGCGCCTCATGCCCGGCCGCATCATCGGCGTCAGCGTCGATTCCAGCGGCAAGCCCGCGCTCCGGATGGCGATGCAGACCCGGGAGCAGCACATCCGCCGCGACAAGGCCACCAGCAACATCTGCACTGCCCAGGTACACTACACGCACGCCACCCGTTCACCAAAATGCCTGACAGCGACAGAGGCGATAAGAGATACGATGAATTTACTAGTCGGTAGTGATAAAGATTGGCTGTGGTGTAGGCCTTGCTCGCCAACATGGCAGCGATGTATGCTGTCTACCATGGTCCCGAGGGGCTAAAGGCAATTGCCGACCGTGTACATGGACTGGCTGGTACATTTGCCCAAGGATTGAAGAAGCTCGGAACAGTGACGGTGCAGGAGCTGCCCTTCTTCGACACTGTCAAGGTCAAGGTCGCTGACGCGAATGCGATTGCCCAGGAGGCCTGCAAGAACGAGATGAACCTTCGTGTCGTTGATGCAACCACGGTTCGCTTTTCTGTTGATGTTTCCCTTGTATTGCAACCGAGTGAGTTTGTTGATGTTGAGTGTTGAGCATTCAATTCAAGTTGTGATGTGTTGCAGATAACCGTTGCCTTTGATGAGACCACAACCTTGGAGGATGTCGACAAGCTGTTCAAGGTGTTCAATGGTGGCAAGCCAGTAAGTAATCATTCAATCGGCGCAAAATTTGTGTGCTTGATAGTGAAATTGGATCGTGATATTAAAATGATGTGTCGTTACAATCATTTTTAGGTGAACTTCACTGCTGAATCCCTCGCACCAGAGGTCTCAAGCTCAATTCCGAGTAGCCTTGTGCGCAAGAGCCCCTACTTAACCCACCCGATCTTTAACATGTATGTGATGTTAAAAGGCATGCTGCTTTTCTTCACTAATTTCTTGCAGTGTTAAAAGATAAAACTGAACTTATGTTGTGGGCTTCCAGGTACCATACAGAGCATGAGCTTCTCCGCTACCTGTACAAGTTGCAATCCAAGGACCTTTCACTGTGCCACAGTATGATCCCTCTTGGTTCTTGCACTATGAAACTAAATGCTACAGTGGAGATGATGCCTGTCACCTACCCCAACTTTGCAAACATGCACCCATTTGCACCTACTGACCAAGCCGCAGGATATCATGTGAGGGGAATTCAGCATTTGTTTAGTTTCTAAATGCAAACTGTTCATCAGATGATCTGAAATGGCTTGTTTTGTGATGAAGGAAATGTTTGATGACTTGGGCGATCTGCTGTGCAAGATCACTGGCTTTGATTCTTTCTCTTTGCAACCAAATGCTGGTGCTTCAGGGGAGTATGCCGGATTGATGGTTATCCGTGCTTACCACAGGGTATGTCATCATAAATAAGTTGGCATAGCTCTCCTGTTTTGTTTCACATTTTGTATTTACAAACCATGTTATAAAAACTGCAGGCAAGAGGAGACTACCACCGGGATGTCTGTATCATTCCTGTGTCAGCCCATGGTACAAATCCTGCAAGTGCTGCTATGTGTGGAATGAAGATTGTTGCTGTTGGAACTGATTCCAAAGGTAACATTAACATCGAGGAGTTGAGGAAAGCTGCTGAAGCAAACAAGGACAACTTGGCTGCTCTTATGGTACTGTTCTTTTTGCTCTGTAAATGTTATCATTTATCTGGTCTTCTGGTAGTACTGTGGAATGCCTATGGTCTCTCTGGTCAACTATTCACTGTTAAATTTAGAGCTAGTTTTCTAATACTGTACTATCACTGCATCACCTTTTCGCTATATTTAGCGTGTTGCTTAAAGTCATAAGGCTATTTCTGTACTTTTTGTTGTTTCTAATATATATTAGGATAGAAACCAGATAGCTGCTCCATAACATGATCCCTATAGTGGCTGTATTTGTATACATTCAATAATTTGAAGTTAATCGACATATATAATAGAAACAAATCCCCAGTTAGTTTAGTTTATCTTTTTCCATATGAGCAATTTTATAGTCTTTGAGAAGGTACCATGAGATACCACTTTTTCCATTGTAAAGTTGATACCTCCTGGTATCTAATTACTAGGAGGTATTAAATTTTACACTAAATTTTTATTACCTCATGGTATCTTCTCAAGGATTGTAAAATTGCTCTTTTCCATATAGGCTATAGCCCGCGGGTGATTTGTGAATAAGATTTTTTTTATTATGGGCATAGAAACATAATAGTTCACTCAGGTTGATTTGATTTATAAAACAAGATTTTGAAATATGTTGGCCTTATGCGTAAAGTAACAGAATGTTGCGTGGTTGCTCTGTTCACCAGGTTACCTATCCTTCGACCCATGGAGTCTATGAAGAAGGCATTGATGAGATATGCATGATAATTCATGAGAACGGTGGGCAGGTCTACATGGATGGAGCTAACATGAATGCTCAGGTTAGTTGTTTGCAGTTTATCATGCCATCAGTCTAGCATGCTCTCTTCAAGTCTTGATGGATTGGAACGCATTGGGGTGAGGCTCTATAAATCGTACAGATGGCCTTTTGGCATGGCGATGATTAAAAAAACAATTAGTTGTGCCTATGAATTATACTAAACATGTTTATGTAACAAGTCTATTTTAATTCAGTTCCAAACACAAGTATACCTTGTTTTGAAACAAACACAGAAGTACCAACTTTCATTTGCATGTTTATCTTTCAATGACCCTTACCCAATTAATTATGCTGAGATATGCTATCTTCAATAAAATATGATAAGCTTTCTCCAAGTTCATCTGATCCCAATTGAGAACTTCTGTTATCGTAATTCCAAAAAACCCCATCTGTCGAGCCAAAAATATTCAATACACTCCCTAACTAACAGAAGTTGTCTTTTTACAGGTCGGATTGACAAGCCCTGGCTTTATTGGAGCAGATGTTTGCCACCTTAACCTTCACAAGACATTCTGCATTCCACATGGTGGGGGTGGTCCTGGAATGGGTCCTATTGGTGTTAAGAAGCACTTAGCACCATTTTTACCATCTCATCCAGTGGTAGGTGCTCTGAATTCAATGTGCTGATAATCTAAACAGATTAATGCTCAATGCCCAACACTTACCTTGAAATATTAGACAAGATTGATATAACACAGAATGCTAGACGACCTTAGAAAAATTCCATCTTTACTCTTTTACAGAATTAGGCAAATTATACGAAATCATGTTACACTCTATAACTAGTCTTTTATGATGTGTTGGACTGAGTATATTTCAGAGGATTCCACACAAACATACATTTCTCTATGTCATCAACAATGCTGTGTTGATTTTTAAAAACTAGTTTCCTTGTAATCCTAACTCCTTCAACTCGAGAACTATTGCTGGTTTTATTTTCTCGCTTTCTTGGTGCCACATTAGCTTAGGTGGGTATGCTAAGTGACACCTTATTTTCATTTTATATTAACCTAAACTCCTGAAGCAAGACTTGCCTGCATCATTTTTCATATCAAAAGCATAGTACGGTGATATTATGTAAAAAAATGCTGTAGAAGTTTTTGTTGATGATAAAACTACTAAACCACATTCGGTACTAAAACCAGAAGTGTTCGTTCATAATTCCATCATTCTTTTTAACAAGAAAAAGCAGATGCTACTTCATTAACCAGATTAATTCTGTAATTATCAGATCACCACCGGTGGCTTCCCTCTCCCTGAGAAAACCGACCCTCTTGGTACCATTTCTGCTGCCCCATGGGGATCAGCGTTGATTCTACCAATTTCCTACACATACATAGCCATGATGGGTTCTAAGGGTCTCACTGATGCTTCAAAGATTGCAATCTTGAATGCAAACTACATGACAAAGCGTCTGGAGGTATATTTGTTACTCGTGATCACTTACCCATTGCTACCTAGTTTGATTGTGTTTGAACTAGTTTTCTAAGTTTTACCATGTTACCTGTACAGAAACACTACCCAGTTCTTTTCCGTGGAGTCAATGGAACTGTTGCCCATGAGTTCATTATTGATTTAAGAGGATTTAAGGTATCTATCATAGTTATTTTGGCATTTGGACCTTGAGTTATGCATTTCAATTTTCTTAATTGGATATCGCAACCTTTTGCAGACGACTGCTGGTATAGAGCCAGAGGATGTTGCAAAGCGTTTGATGGACTATGGATTCCATGCACCTACTATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAAGTGAAAGCAAGGTAAAACACTAAAACACATACTATATTCCTTAGCATTGTACCAACCATTCTTTTATATGAGCTTAATGTCACATCAATTATCTCGCAGGCCGAACTCGATAGGTTCTGTGATGCTCTAATCTCAATCAGGGAAGAAATTGCAGAGATAGAAAGTGGCAAAGCAGATGTGAACAACAACGTCCTCAAGGTAAAATACTACTATACCGCTATCTGTTTTCATATATTAGATTGTAAGTTCGTAACACCTATCTATCTATATACGGGCAATTATGTTCTTACCCCCAATTCTTATAGGTTATATAAGATGTTAGTAGACCCCGTTCAATCCTAGTCCTCATGCTGTATGCAATTTTGGAGATACATTAGCATGGTCCAAACTCAAAAGTTCAAACATGAGGCGGCTGCATAGCTCTTGCATCACCAGGATGTTGACATGTGATTCTTGTTTTGTTCCGTTGTTGTGCAGAGTGCTCCTCACCCGCCCCAACTTCTGATGAGCGACTCATGGACTAAGCCGTACTCCAGGGAGTATGCTGCGTTCCCTGCAGCGTGGCTTCGGGGCGCCAAGTTCTGGCCAACAACATGTACCTACTTGCTTGCTTTCTGTGTCTCCAAAAGATCGCTCTTAATTTGCTCAACACAATTTGACACCAACCTAATCTGTATTCTGCCGTGTCTGTGTGCTCTTACCAGGTCGCGTGGACAATGTGTACGGGGATCGCAACCTCATCTGCACTCTGCAACAGGGATCCCAAGTCGCAGAAGAAGCTGCAGCTGCTACCGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020897

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA020897&oldid=43422"