BGIOSGA020936

From RiceWiki
Revision as of 12:54, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA020936| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA020936, complete gene.| tag = P0417D0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA020936

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA020936, complete gene.

LocusTag

P0417D05.32

Ensembl Transcript ID

BGIOSGA020936-TA

Ensembl Protein ID

BGIOSGA020936-PA

Length

1593

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24430509..24432101

Sequence Coding Region

24430509..24432101

Genome Context

<gbrowseImage1> name=IndicaChromosome06:24430509..24432101 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:24430509..24432101 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATGGCGGCGGCGAGGAGGGGCCACGGGATGCCGCTCTGGGAGTGCAACGTGCTGATCAGGACGCTGGCGAGGCGGGGGAGCTTCGCGCGCGTCATGGCGGTGTACTACGACCTCCGCGCGCGGGGACTCGTGGCGGACAGCTTCACCTACCCGTTCGTGCTCAGGGCCGTCGGGGTCCTCAAGCTGTCGGTCGAGGGGCGCAAGGCGCACGCGGCCGCCATCAAGACCGGGTTCCGGTGGGACGCCTACACCGGGAGCTCGCTGATGGAGATGTACACGATGCTGGGGCGCGTGGACATCGCGCGGAAGGTGTTCGACGAAATGCCGAGTAGGGCGCTGGTGCTGTGGAACATGATGGTCAGGTGCTACATCAGGTGCGGGCGGTACTCGGCGGCAGTTGCTTTGTCTGAACAGATGGAGAGAAGCGGTGTCACACCTGACAGGGTGACGTTGGTGACGGCGGTGACAGCGTGCTCTAGAGCGAGGGACCTGAGCTTGGGAAGGAGGATTCATGTGTACATGGATAACGTCTTCGGTTTCAATCTGCCAGTTGCAAATGCTCTGCTGGACATGTACACGAAGAATGATTGCTTGGAAGAGGCGGTGAAATTGTTCGAGCAAATGCCTGCGAGGAACATAATTTCTTGGACCATACTTGTGTCGGGATATGGCCTTGCTGGGCAGCTGGACAAGGCCAGAGTGCTCTTCAACCAGTGCAAAGAGAAGGATCTAATTCTGTGGACTGCAATGATCAATGCGTGTGTGCAACACGGATGCTTCGAGGAGGCGCTGACATTGTTCCGAGATATGCAGATGCAACGGGTTGAGCCAGACAGGTTCACTGTTGTCACTCTCCTGACATGCTGTGCCAATCTTGGCGCTCTTGATCAAGGTGAATGGATTCACCAGTATGCTGAACAAAGGAAAATGAAGATCGATGCAGTCCTAGGCACCGCGTTGATTGACATGTATTCTAAATGTGGGCACATTGAGAAGTCTCTAGAGGTCTTCTGGCGAATGCAAGGCAGAGATGCCACAGCTTGGACTGCCATCATCTGTGGGCTGGCCACAAATGGTCAGGCTGGTAGAGCTCTTGAACTGTTTCAAGATATGCAGAGAAGTAAAGTTAAGCCCGACGGTGTTACGTTTATTGGGGTGCTAAGTGCATGCTGCCATGGTGGCTTGGTTGATGAAGGCCGGAAGCAGTTCCATGCAATGAGGGAGGTTTATCAGATAGAACCAAGAGTTGAACACTATAGCTGCCTTGTGAACCTCCTAGGTCGTGCTGGTCTACTAGATGAAGCTGAGAGGTTGATCGGTGACGTTCCAATTAACAAGGATGCTATGCCACTGTTTGGTGCACTCCTCACTGCTTGCAAGGCTCATGGGAATGTTGAGATGAGTGAACGGTTAACCAAACGAATCTGTGAGCAAGATTCCCAAATTACTGATGTGAATTTGCTCATGTCTAATGTATATGCAACAGCAAGTAGATGGGAGGATGTGATAAGGGTACGGGGCAAGATGGCACACCCTACTGTCAAGAAGACTGCAGGGTGTAGCTTGATTGAGGTGAAGGGGTACTGA</cdnaseq>

Protein Sequence

<aaseq>MAMAAARRGHGMPLWECNVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAIKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGRYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKTAGCSLIEVKGY</aaseq>

Gene Sequence

<dnaseqindica>1..1593#ATGGCGATGGCGGCGGCGAGGAGGGGCCACGGGATGCCGCTCTGGGAGTGCAACGTGCTGATCAGGACGCTGGCGAGGCGGGGGAGCTTCGCGCGCGTCATGGCGGTGTACTACGACCTCCGCGCGCGGGGACTCGTGGCGGACAGCTTCACCTACCCGTTCGTGCTCAGGGCCGTCGGGGTCCTCAAGCTGTCGGTCGAGGGGCGCAAGGCGCACGCGGCCGCCATCAAGACCGGGTTCCGGTGGGACGCCTACACCGGGAGCTCGCTGATGGAGATGTACACGATGCTGGGGCGCGTGGACATCGCGCGGAAGGTGTTCGACGAAATGCCGAGTAGGGCGCTGGTGCTGTGGAACATGATGGTCAGGTGCTACATCAGGTGCGGGCGGTACTCGGCGGCAGTTGCTTTGTCTGAACAGATGGAGAGAAGCGGTGTCACACCTGACAGGGTGACGTTGGTGACGGCGGTGACAGCGTGCTCTAGAGCGAGGGACCTGAGCTTGGGAAGGAGGATTCATGTGTACATGGATAACGTCTTCGGTTTCAATCTGCCAGTTGCAAATGCTCTGCTGGACATGTACACGAAGAATGATTGCTTGGAAGAGGCGGTGAAATTGTTCGAGCAAATGCCTGCGAGGAACATAATTTCTTGGACCATACTTGTGTCGGGATATGGCCTTGCTGGGCAGCTGGACAAGGCCAGAGTGCTCTTCAACCAGTGCAAAGAGAAGGATCTAATTCTGTGGACTGCAATGATCAATGCGTGTGTGCAACACGGATGCTTCGAGGAGGCGCTGACATTGTTCCGAGATATGCAGATGCAACGGGTTGAGCCAGACAGGTTCACTGTTGTCACTCTCCTGACATGCTGTGCCAATCTTGGCGCTCTTGATCAAGGTGAATGGATTCACCAGTATGCTGAACAAAGGAAAATGAAGATCGATGCAGTCCTAGGCACCGCGTTGATTGACATGTATTCTAAATGTGGGCACATTGAGAAGTCTCTAGAGGTCTTCTGGCGAATGCAAGGCAGAGATGCCACAGCTTGGACTGCCATCATCTGTGGGCTGGCCACAAATGGTCAGGCTGGTAGAGCTCTTGAACTGTTTCAAGATATGCAGAGAAGTAAAGTTAAGCCCGACGGTGTTACGTTTATTGGGGTGCTAAGTGCATGCTGCCATGGTGGCTTGGTTGATGAAGGCCGGAAGCAGTTCCATGCAATGAGGGAGGTTTATCAGATAGAACCAAGAGTTGAACACTATAGCTGCCTTGTGAACCTCCTAGGTCGTGCTGGTCTACTAGATGAAGCTGAGAGGTTGATCGGTGACGTTCCAATTAACAAGGATGCTATGCCACTGTTTGGTGCACTCCTCACTGCTTGCAAGGCTCATGGGAATGTTGAGATGAGTGAACGGTTAACCAAACGAATCTGTGAGCAAGATTCCCAAATTACTGATGTGAATTTGCTCATGTCTAATGTATATGCAACAGCAAGTAGATGGGAGGATGTGATAAGGGTACGGGGCAAGATGGCACACCCTACTGTCAAGAAGACTGCAGGGTGTAGCTTGATTGAGGTGAAGGGGTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA020936