BGIOSGA021045

From RiceWiki
Revision as of 12:56, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021045| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021045, complete gene.| tag = P0458E1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021045

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021045, complete gene.

LocusTag

P0458E11.18

Ensembl Transcript ID

BGIOSGA021045-TA

Ensembl Protein ID

BGIOSGA021045-PA

Length

3551

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:21930084..21933634

Sequence Coding Region

21933304..21933634,21932542..21932681,21931349..21932063,21930901..21931004,21930714..21930822
,21930517..21930576,21930084..21930259

Genome Context

<gbrowseImage1> name=IndicaChromosome06:21930084..21933634 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:21930084..21933634 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGGCGTCGTCGGAGTCAGCGGATGCCGCCGCCGCTGGGCCGTCGACGCTGAGCATCTACAAGGCGGCGCGGCGCATCAAGCGGCGGGAGAGCACGCTGTACAACGCGCTGCGGAGCGTGGCGGACGACGCGGCGTTCGTGGCGGAGATCGCGGCGCTGTGGCCGGCGCTGCCGCTGGTCGCCAACCTCCGCTGCGGGCTCTGGTACTTGCCGCCCCGCGCCGTCGCCGCCACCTGCTACTTCAAGTCCACCGATGGGCACGCGGGCAACTGGGCCTTCTCCACCGCCCGCCTCAACCTCCACCTCGCCCTCCTCGCTGGGGAGAGAGGAGGGTGCATAATTGTTGATTCAACAAGGAGAGGGAAACGTTTCCCTGACAGCATGTCAAAGACCATACCCATTTGGTGCTGTGTCCTCAACCGAGCAATTGAGAGGTATCGGCTGCAGACTAACAACAAGTCAGCTGCTGTAGCCAACAAAGACGCTGAAAAGATCTCTGAATCATCAAACTGGGATAACTCAGTGCATCTTCCTGTATGGGTTCTAGAGACTGAGAAAAATGCTATAGAGGGGCGTATCGAGGAATGGACAACCCAATTTGAATCATGTGGTGCAGACATTCGTTCTCTTGCGTTAAGTTTGAAGAAACCACTACGTCCATTGTGGATATCACAAAGGACACGGATATGGTTAAATGAAGTTCCAGAGCTTGAATCATGGGATTTCACCCCTATCATATTAGTTTCAGCATCTGCATCTGGTGCAGTAGCTACACAAAGGATGACTTCAGAGTTCAGCTGGCACTATATTCCTGGAGCTGGAGATGATGAAGAGAGTTGGGCACGTGGTCTCACTCCTACATTATTCTGGAAGCACTCATATGATCTGCTTGATGGTGGACCAGACCTTTGTAATCAGTTAGTTGCAGATATTGTTGAAAAAGATAGGGTCTATCGTGCACAGAGAGGCGAATATTCTCCCCAAATTACAGCTAAGCCTTTGAAGTGTTCAAGCCATGATGGTCCTTTCAGTAATGGTGATCATACAAGTATTGTGCAACCAATGGACTCGGATCCTCCTACCGTTACTGCTATGGACAAACAAAATTCCAGTGATGGCCATATACTCTTCTGGATTGGGACATCAAACCTTGCAGTAGCATCAACTCTCCAAGTTGGAGATTCCTTAGCTGAAGTGGATTGTATACTGAACTGTGACAGCACATCAAATTTACCTTTGACTTCATCAGAGAATTCTTACCTTGAACTACCTATGGTGGGATCAAAGGACGACCGGTTTTCGTTGATGAAAAACCTTCCAAAAGCAGTTAGCTTTGCAAACAGGAATTTGATAGCAGGGAAGAAGCTACTAATATGCTGTCAAAATGGAGAGGATATAAGCATCTGTGTGGCCTTGGCGATAATTACACGATTATTTGATTGCGATGGATTCTTTGATCATGGCAATTCATTTCTGAAAGGAGACGTCACGAAGTTGGAGATGAGGAAGAGGCTGGTTTTTGTTTGCAAATATGCTGTTAATGCAAGACCATCTAGAGGAAACTTGAAGCAGGTCTATGGTTTCCTTTGCAGCGAGAAGGAACAGTTTTCTTGTTTGACGTAG</cdnaseq>

Protein Sequence

<aaseq>MAAAAASSESADAAAAGPSTLSIYKAARRIKRRESTLYNALRSVADDAAFVAEIAALWPALPLVANLRCGLWYLPPRAVAATCYFKSTDGHAGNWAFSTARLNLHLALLAGERGGCIIVDSTRRGKRFPDSMSKTIPIWCCVLNRAIERYRLQTNNKSAAVANKDAEKISESSNWDNSVHLPVWVLETEKNAIEGRIEEWTTQFESCGADIRSLALSLKKPLRPLWISQRTRIWLNEVPELESWDFTPIILVSASASGAVATQRMTSEFSWHYIPGAGDDEESWARGLTPTLFWKHSYDLLDGGPDLCNQLVADIVEKDRVYRAQRGEYSPQITAKPLKCSSHDGPFSNGDHTSIVQPMDSDPPTVTAMDKQNSSDGHILFWIGTSNLAVASTLQVGDSLAEVDCILNCDSTSNLPLTSSENSYLELPMVGSKDDRFSLMKNLPKAVSFANRNLIAGKKLLICCQNGEDISICVALAIITRLFDCDGFFDHGNSFLKGDVTKLEMRKRLVFVCKYAVNARPSRGNLKQVYGFLCSEKEQFSCLT</aaseq>

Gene Sequence

<dnaseqindica>1..331#954..1093#1572..2286#2631..2734#2813..2921#3059..3118#3376..3551#ATGGCGGCGGCGGCGGCGTCGTCGGAGTCAGCGGATGCCGCCGCCGCTGGGCCGTCGACGCTGAGCATCTACAAGGCGGCGCGGCGCATCAAGCGGCGGGAGAGCACGCTGTACAACGCGCTGCGGAGCGTGGCGGACGACGCGGCGTTCGTGGCGGAGATCGCGGCGCTGTGGCCGGCGCTGCCGCTGGTCGCCAACCTCCGCTGCGGGCTCTGGTACTTGCCGCCCCGCGCCGTCGCCGCCACCTGCTACTTCAAGTCCACCGATGGGCACGCGGGCAACTGGGCCTTCTCCACCGCCCGCCTCAACCTCCACCTCGCCCTCCTCGCTGGTCTGCTCCTGGTTCCCCCCCTTACTCATTGTTGAAGTATTTGGTCTAAACTATGCTATATGTTTAATCCAGGCGTCTAGAACTAGAGTTTAGCACTGCAATCCGTTTTACCTGTCGAAGCAGGTGGTATAATTAAATTGTTTGCTAATTCAGTTATTTCGAATAACCATGGTCAAATAGTTCGAACATTTCAGTATATAATACTCCCTCTATTTCAAAATGTTTGACACTGTTGACTTTTTAGCATATGTTTGACCATTCGTCTTATTAAAAAATTTTGTGAAATATGTAAAACTATATGTGTACATGAAAGTATATTTAACAACGAATCAAATGATATGAAAAGAATAAATAATTACTTAATTTTTTTGAGTAAGACGAATGGTCAAACACATACTAAAAAGTCAACGGTGTCAAACATTTTGAAACGGAGGGAGTAATATAATATCAGTGTGGCTGTGCGGATAATTTGAATTCTCGGAAGGTTGTGTAATATACAGCTTAATAATTCATGTTACTGTGATTTTTTTCAAGAATTTTCACTTGCTAAATATGATGCTTGATGAGTGCAAAATGCCTTTAACACAAGTAATTTGTTTTTGTCTATTTTTTCTCTGGGCAGGGGAGAGAGGAGGGTGCATAATTGTTGATTCAACAAGGAGAGGGAAACGTTTCCCTGACAGCATGTCAAAGACCATACCCATTTGGTGCTGTGTCCTCAACCGAGCAATTGAGAGGTATCGGCTGCAGACTAACAACAAGGTAAGTGGAGTGGATTTGGATGTGGTTGGTATATCGGCTTCCTATAGTTCTACTGGAACGGCATTATGTCACTCTACCCTTTCCCTTTGTGCACATTTACCTCATTTCAAGGCTTTTTATTGCTATAGTTTAATACTTAAATTTATACAGTAAATAACCCTTGTGCACATGTACCTCATTTCACGGCTTTCCATTGATATAGTTAAATTTGTACAGTAAAAATGCATAAGATGCCTGTTTTGGTAACTAGTAACTACTATCCTTAGAGTACGCCAAACTCTGGGCCCAAGTGATCACTATAGAGAACCAAAGGCAAACAACAGAAATAAGGCTGTTGAAATTCACAATGTGATTTATGTCTCCTGTTCTTCCTGTTATATGATCTTTTCTTCCTGTTCTTCTCATTTGTCCCTTTGTTTGAATTTCAAACTTTCCATGTTCACCCATCCTCATGATATTTTGTAATTTTGCATGTTAGTCAGCTGCTGTAGCCAACAAAGACGCTGAAAAGATCTCTGAATCATCAAACTGGGATAACTCAGTGCATCTTCCTGTATGGGTTCTAGAGACTGAGAAAAATGCTATAGAGGGGCGTATCGAGGAATGGACAACCCAATTTGAATCATGTGGTGCAGACATTCGTTCTCTTGCGTTAAGTTTGAAGAAACCACTACGTCCATTGTGGATATCACAAAGGACACGGATATGGTTAAATGAAGTTCCAGAGCTTGAATCATGGGATTTCACCCCTATCATATTAGTTTCAGCATCTGCATCTGGTGCAGTAGCTACACAAAGGATGACTTCAGAGTTCAGCTGGCACTATATTCCTGGAGCTGGAGATGATGAAGAGAGTTGGGCACGTGGTCTCACTCCTACATTATTCTGGAAGCACTCATATGATCTGCTTGATGGTGGACCAGACCTTTGTAATCAGTTAGTTGCAGATATTGTTGAAAAAGATAGGGTCTATCGTGCACAGAGAGGCGAATATTCTCCCCAAATTACAGCTAAGCCTTTGAAGTGTTCAAGCCATGATGGTCCTTTCAGTAATGGTGATCATACAAGTATTGTGCAACCAATGGACTCGGATCCTCCTACCGTTACTGCTATGGACAAACAAAATTCCAGTGATGGCCATATACTCTTCTGGATTGGGACATCAAACCTTGCAGTAGCATCAACTCTCCAAGGTACAAAACATGATTATTTATACAGTTGCATATTTGTTTTATTATTGTTTGTGCTTTCTTGTCAATATCTTGTCATGTACTGCGTTGATCTGTTGATTTTTTTTTTTTGTTCTTTAGCGGGTCTGTTTATCATTCTTTTATGCATATCTCTGTATACTGCAAAAAAGTGTGCTAGCCTGTCTACAAGTTTTTGTATTATGTAGATGTGGATAGAATCATAGATATCAACTAGTTAGAACCTTCCTTTAATCAAATTTGTTGTTTCAAGATACATACAAAGTTTCATATGATGCAGGCGTACTGTTGATGATAGTTTTTTTTTTCTGTATGCATGATCTATGCAGTTGGAGATTCCTTAGCTGAAGTGGATTGTATACTGAACTGTGACAGCACATCAAATTTACCTTTGACTTCATCAGAGAATTCTTACCTTGAACTACCTATGGTGGTAAGTGAAATTTTTCTGACCATTTTAGTTTTCCCAGTATGTAAACATTGTCATCATTTTGTACTTTTATGCTATTAGGGATCAAAGGACGACCGGTTTTCGTTGATGAAAAACCTTCCAAAAGCAGTTAGCTTTGCAAACAGGAATTTGATAGCAGGGAAGAAGCTACTAATATGCTGTCAAAATGGTAATGCTAGCACATTTCACTGTCTAAAAAAGCTTACACATGCTTTCTTCATCATGCTGTAATAAGTAAAACCATAAGTTTGCCTGACAGTTCTTTGTACAAGTGAGCCCTTCATTGTTGTTTTATTTCCCTTACAGGAGAGGATATAAGCATCTGTGTGGCCTTGGCGATAATTACACGATTATTTGATTGCGATGGTAAGCATATTTATACAACTTCTTTATTTTAGAAGATGACTTATCTTTCTATCAATTTTGCTTCTCTTGAATTAAAAAGGTAATTTTGTGGTGTTGTGCCATTTTTATCAGTTTTCTACTCATCTTAAATCATGTCAAAACATAATAATGCTCTTGATATCAAATTATTTTTATAGAAGATTAGGTATGTTCCAACAATTTAATAATTTCACGACATCAAGTTTACGTATCTTTAATTAATTGCTCTTTGTTCCAAGGATTCTTTGATCATGGCAATTCATTTCTGAAAGGAGACGTCACGAAGTTGGAGATGAGGAAGAGGCTGGTTTTTGTTTGCAAATATGCTGTTAATGCAAGACCATCTAGAGGAAACTTGAAGCAGGTCTATGGTTTCCTTTGCAGCGAGAAGGAACAGTTTTCTTGTTTGACGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021045