BGIOSGA021079

From RiceWiki
Revision as of 12:56, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021079| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021079, complete gene.| tag = OJ1212_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021079

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021079, complete gene.

LocusTag

OJ1212_H09.28

Ensembl Transcript ID

BGIOSGA021079-TA

Ensembl Protein ID

BGIOSGA021079-PA

Length

3536

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:21363113..21366648

Sequence Coding Region

21366349..21366648,21365747..21365836,21365522..21365627,21365178..21365248,21365002..21365090
,21364617..21364737,21364311..21364454,21363876..21364201,21363531..21363771
,21363113..21363442

Genome Context

<gbrowseImage1> name=IndicaChromosome06:21363113..21366648 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:21363113..21366648 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAAGGTTCTTGCGGCGGTGGCGGCGGCGGCGGCGCCGGGCAGATGGCGGCGTGGCAGGGGAGGGTCGGGGCGACCAACATCGGGAGGCTGCGGCATGGGAAGACGTCGTCGTCGTCGTCGTCGTCGGCGGCGGTGGCGGCGAGGGGCGGCGGCGTGACGGCGTGGCACCTGAGGGTGTTCGCCGGCGTGGTGGGAGTGATGGGGTGCCTCCTGCTGGTGGCGTCCCTGATGATGTCCGCCGTCCACCAGGTGCAGTTCAGGAACGCAGCCATTTCCAGGAGCTTCAGGGGCCTTCAGGAACTGAAGCAAAATTCTGTAAGGACGGAGGAAGCAGAGCAGATAATGCACCCAAGGCTTCTGCAAATGGCAACTTCAGTTGTCACAAAGAACGAGTCTGACAGTGACAGTGTAAAATTTTCACTATGGGAAGAGCCCTACAAACAAGCACGTAAATGGAAGCCCTGTGCTGCAAAGCATAGTTTACCTGATGAAGTGCCTGAAGAGAACAACAATGGGTTCATTCTGATCAGCGCGAATGGTGGTCTGAACCAACAGCGTGTGGCTGTGTGTAATGCTGTTGTTGTTGCAGCTCTGCTTAATGCTACACTAGTCCTCCCCAGGTTTCTTTACAGCAGCGTTTGGAAGGACACAAGCCAGTTCGGTGACATATATCAGGAGGACTACTTTGTGAACTACATGAAGAGCGATGTGCACATTGTGAAAGATTTGCCTCCCCATCTTCAGTCACTGGATCTCGAAGCAATCGGCAGCCAAATCACAGACATGGACATCTCGAAAGAAGCTGCGCCATCTGAATTCATCAAAGCTGTGCTCCCAATTCTCCAGCAGAATGGCGTTGTCCATTTCCTCGGATTCGGCAACCGGCTCGGCTTCGATTCGGTGCCCGTTCATCTGCAGAGGCTGCGATGCAGGTGCAACTTCCACGCGCTCAAGTTCGTCCCGGAGATCCAGCGGGCGGGCTCCCTGCTGGTCCAGCGGCTGCGCCGCGCCGGCGCGATGCGGACGGAGATGGACAAGCAGCTGTTCGGGAGCAACATGCTCGACGTCCCCGCCCTCCTCGCCGGCGGCGAGCCGAGCAGGTACCTGGCGCTGCACATGAGGTTCGAGGAGGACATGGTGGCGTACTCGCTCTGCGACTTCGGCGGCGGCGACGCGGAGAGGGAGGAGCTGCAGGCGTACAGGGAGACCCACTTCCCGACGCTCGCCATGCGCCTCCGGAACACGTCGGTGTCGCCGGAGGAGCAGCGCAGCCTGGGGCGGTGCCCGCTGACGCCGGAGGAAGCCGGGCTCGTGCTCACCGCGCTCGGCTACGACCGCGGGACGTTCATCTACGTCGCCGGGTCACAGATATACGGCGGCGCCGCGCGGCTCCGCCCACTGACGCGCCTCTTCCCCAACCTGGTCACCAAGGAGGACGTCCTCTCCTCCGCCGAGCTAGCCCCATTCAAGAACTTCTCCTCCCGGCTCGCGGCGCTGGACTTCATCGCGTGCGCCTCGGCGGACGTGTTCGCAGTGACGGACTCCGGCAGCCAGCTGTCGTCGCTGGTGTCCGGGTACCGGGTGTACCACGGCAGGGGGAGGGCGCCGACGCTGCACCCGAACCGGAAGCGATACGCGCAGATCCTGGGCGAGGAGGAGGGGATCGGGTGGGGCGGATTCGAGAGGAGGGTGAGGAACATGGTGGAGGAGTACAAGCGGGTCAGCGCGCGGCCGCGGGGGCGGAGCGTGTACCGGCAGCCGAGGACGCCCGGGTGCATGTGCAGGGCAGCCGGCGACGGCAGCGTCGACTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MEGSCGGGGGGGAGQMAAWQGRVGATNIGRLRHGKTSSSSSSSAAVAARGGGVTAWHLRVFAGVVGVMGCLLLVASLMMSAVHQVQFRNAAISRSFRGLQELKQNSVRTEEAEQIMHPRLLQMATSVVTKNESDSDSVKFSLWEEPYKQARKWKPCAAKHSLPDEVPEENNNGFILISANGGLNQQRVAVCNAVVVAALLNATLVLPRFLYSSVWKDTSQFGDIYQEDYFVNYMKSDVHIVKDLPPHLQSLDLEAIGSQITDMDISKEAAPSEFIKAVLPILQQNGVVHFLGFGNRLGFDSVPVHLQRLRCRCNFHALKFVPEIQRAGSLLVQRLRRAGAMRTEMDKQLFGSNMLDVPALLAGGEPSRYLALHMRFEEDMVAYSLCDFGGGDAEREELQAYRETHFPTLAMRLRNTSVSPEEQRSLGRCPLTPEEAGLVLTALGYDRGTFIYVAGSQIYGGAARLRPLTRLFPNLVTKEDVLSSAELAPFKNFSSRLAALDFIACASADVFAVTDSGSQLSSLVSGYRVYHGRGRAPTLHPNRKRYAQILGEEEGIGWGGFERRVRNMVEEYKRVSARPRGRSVYRQPRTPGCMCRAAGDGSVDF</aaseq>

Gene Sequence

<dnaseqindica>1..300#813..902#1022..1127#1401..1471#1559..1647#1912..2032#2195..2338#2448..2773#2878..3118#3207..3536#ATGGAAGGTTCTTGCGGCGGTGGCGGCGGCGGCGGCGCCGGGCAGATGGCGGCGTGGCAGGGGAGGGTCGGGGCGACCAACATCGGGAGGCTGCGGCATGGGAAGACGTCGTCGTCGTCGTCGTCGTCGGCGGCGGTGGCGGCGAGGGGCGGCGGCGTGACGGCGTGGCACCTGAGGGTGTTCGCCGGCGTGGTGGGAGTGATGGGGTGCCTCCTGCTGGTGGCGTCCCTGATGATGTCCGCCGTCCACCAGGTGCAGTTCAGGAACGCAGCCATTTCCAGGAGCTTCAGGGGCCTTCAGGTACGCTGCCTACCTCTGGTCTGCTCTCCTCTCATCGAATCAAATCATGGCAAATTAAGCTCAGTTTGATCATCACAAAAGCGTCCCCAAATTGCATCCCATTTTCATCATTCTTTCTAGTCCTTGACTTGTTTTGGTTGAAGTCTCATGGTATGATGGGCTTTCTTACAAACTCGGATTGCAATGATATTTCATCCAAAAAAATATCTGATGGTGCGTTTTTTTTTTTCAAAATGAAAACAAAAATGTACTGATTTGGCATGGTCATTGGAACCAATGCGCTCTCAATGCAATAAAAAACTGAATGGAAGTCAGTCTAGCAGCTTGAATTTCCATTCAAATGAAGTACGGTTCCTGTAGAAGGAATGATCAGGACCTAGCAGCATTATATGACATGCTGACTGCTGACATATTATAAATCGTATTGCAAATTTAGATAGAACACCGGTAATTGATTTCTTCATATTCTCGTCGAATCAGTCGACCTGATAATCCTATTTTGTGAATTGAAGGAACTGAAGCAAAATTCTGTAAGGACGGAGGAAGCAGAGCAGATAATGCACCCAAGGCTTCTGCAAATGGCAACTTCAGTTGTCACAAAGGTTTCACGCTGCCATCATACGCGGCACCAAACTGCCAATTAGCTTCAGAAGTAGTGTAATTTACGACATCATATATTTAGCTTTTACTCATGTCAAATTTTCCCTCCCTGCCAGTGCAGAACGAGTCTGACAGTGACAGTGTAAAATTTTCACTATGGGAAGAGCCCTACAAACAAGCACGTAAATGGAAGCCCTGTGCTGCAAAGCATAGTTTACCTGATGAAGGTGAAGCCTTTCCTTTCAAGCAATTGCAATTAGTTTCATTATCATTACCATATCAGGTGACAAAAAGAATTCTTAACCCACCCCTTCTGTATTAAAAGAATGAAAGCCCTTATTGCAGCTTTTTTTTATTGATGCTTGAAGCCTCTGCAATTTGAATTCTTAAACCATCAACATCTAGCATATGCCTACACCCTGAAATGTTTCTGAAGCATGGGAAAATACTATGGTTTAACACAACTATTTCATCTCTCACACTGGATTTGTGCTTCACAGTGCCTGAAGAGAACAACAATGGGTTCATTCTGATCAGCGCGAATGGTGGTCTGAACCAACAGCGTGTGGCTGTAAGGATCTAGTGCTGAAATGCTCACAAAATCCATATTACGTTATTTTCAGATTCAGTAGCTAATAGTTGAATTTTTATCTTCCAGGTGTGTAATGCTGTTGTTGTTGCAGCTCTGCTTAATGCTACACTAGTCCTCCCCAGGTTTCTTTACAGCAGCGTTTGGAAGGACACAAGGTTAGAACTGCAATTATGACTGCCAGTATAAGCTTGGTTCTACCTTTTTCTTTTACTTTTATTGTAAGTAATCATTGCAGTTCTACTAATCGCATTATGGAAAGAAAAGCACACCGAACTGAGTTTATGCTTTTGCTGACATGTATCAATTATCAGTTGAACTGAAATTGATAAACTGCGATACTATTTGCCATCTTTTTATCAAGAAATTATTTTTGGTAACTTTTGTCTGATATGCTTCGCCGAACCTTTCGTTTCGACCAGCCAGTTCGGTGACATATATCAGGAGGACTACTTTGTGAACTACATGAAGAGCGATGTGCACATTGTGAAAGATTTGCCTCCCCATCTTCAGTCACTGGATCTCGAAGCAATCGGCAGCCAAGTTAGTGTCTCTATTCTAACAATTATGCTACCTGATTCTGAGAAAAAAAAATCTATGATCAGTTTGAAGATCATAATTTTTTCACTAAATCTTGAGAAATTTCTGTAGAATTCATGCCCTCTAAAGTCTAAACAGATGCGAAATCTCTCTGTTTCATGACAGATCACAGACATGGACATCTCGAAAGAAGCTGCGCCATCTGAATTCATCAAAGCTGTGCTCCCAATTCTCCAGCAGAATGGCGTTGTCCATTTCCTCGGATTCGGCAACCGGCTCGGCTTCGATTCGGTGCCCGTTCATCTGCAGGTCACGCACACAGTTCATCTTCCTCGATCGTCGCACTTGTCGAGATGAGAGAAGCACCATTGCCATCCATCCTCTGCTTTGCTCATGGCGTCGGCGTCGGTTCTTGCAGAGGCTGCGATGCAGGTGCAACTTCCACGCGCTCAAGTTCGTCCCGGAGATCCAGCGGGCGGGCTCCCTGCTGGTCCAGCGGCTGCGCCGCGCCGGCGCGATGCGGACGGAGATGGACAAGCAGCTGTTCGGGAGCAACATGCTCGACGTCCCCGCCCTCCTCGCCGGCGGCGAGCCGAGCAGGTACCTGGCGCTGCACATGAGGTTCGAGGAGGACATGGTGGCGTACTCGCTCTGCGACTTCGGCGGCGGCGACGCGGAGAGGGAGGAGCTGCAGGCGTACAGGGAGACCCACTTCCCGACGCTCGCCATGCGCCTCCGGAACACGTACGTCTCCGTCTCGATCTCTTGCGGAAGAACCCGATCGCCGGCGTGGTGTCTTGTCTGACACGGTGGCGCCGCCGCCATCGCGTGCGTTTGTGTGTGTGCAGGTCGGTGTCGCCGGAGGAGCAGCGCAGCCTGGGGCGGTGCCCGCTGACGCCGGAGGAAGCCGGGCTCGTGCTCACCGCGCTCGGCTACGACCGCGGGACGTTCATCTACGTCGCCGGGTCACAGATATACGGCGGCGCCGCGCGGCTCCGCCCACTGACGCGCCTCTTCCCCAACCTGGTCACCAAGGAGGACGTCCTCTCCTCCGCCGAGCTAGCCCCATTCAAGAACTTCTCCTCCCGGGTCGGTAAAACATCAAACACCTCCCCTGCAAGCAACGCCATCTCCTCCGTTATTCTGACATCCGAAAGAAAAAAAAAACAAAATGCAGCTCGCGGCGCTGGACTTCATCGCGTGCGCCTCGGCGGACGTGTTCGCAGTGACGGACTCCGGCAGCCAGCTGTCGTCGCTGGTGTCCGGGTACCGGGTGTACCACGGCAGGGGGAGGGCGCCGACGCTGCACCCGAACCGGAAGCGATACGCGCAGATCCTGGGCGAGGAGGAGGGGATCGGGTGGGGCGGATTCGAGAGGAGGGTGAGGAACATGGTGGAGGAGTACAAGCGGGTCAGCGCGCGGCCGCGGGGGCGGAGCGTGTACCGGCAGCCGAGGACGCCCGGGTGCATGTGCAGGGCAGCCGGCGACGGCAGCGTCGACTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021079

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA021079&oldid=43604"