BGIOSGA021112

From RiceWiki
Revision as of 12:57, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021112| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021112, complete gene.| tag = P0410C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021112

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021112, complete gene.

LocusTag

P0410C01.35-1

Ensembl Transcript ID

BGIOSGA021112-TA

Ensembl Protein ID

BGIOSGA021112-PA

Length

2819

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:20601589..20604407

Sequence Coding Region

20604146..20604407,20603821..20604036,20603570..20603718,20603219..20603492,20601589..20601815

Genome Context

<gbrowseImage1> name=IndicaChromosome06:20601589..20604407 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:20601589..20604407 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAGGCCGAGGAGGCGAGGAGGCGCCGGCACGTGGGTGGCGGCGGTTCTTGCTGCGGCGCTGCAGGTTCTTGCGGTGTCCGCCGCGGGGAAGTACAGGGCGGTGTTCAATTTCGGGGACTCGCTGGTGGACGCCGGCAACCTGGTCACGGACGGCATCCCGGACTACCTCGCCACCGCGCGCCCGCCCTACGGCCAGACCTACTTCGGCTACCCCACCGGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCATCGCGCAAGAGTTCGGCCTGCCGCTGCTGCCCCCTTCCAAGGCCAAGAACGCCAGCTTCGCGCGGGGCGCCAACTTCGCCATCACCGGCGCCACCGCGCTCGACACCGACTTCTTCGAGAGGCGCGGCCTCGGCAAGACGGTCTGGAACTCCGGCTCCCTCTTCACCCAAATCCAGTGGCTGCGCGACATCAAGCCCTCCTTCTGCAGCTCCACCCAAGATTGCAAGGATTTCTTCGCCAAGTCCCTGTTCGTCGTCGGCGAGTTCGGCGGGAACGACTACAATGCGCCGCTCTTCGCGGGGAAGGACCTCAGGGAGGCCTACAATTTGATGCCTCATGTCGTTCAGGGCATATCCGATGGCGTTGAGCAACTGATTGCCGAGGGCGCGAGGGATTTGATTGTGCCCGGAGTGATGCCATCCGGTTGCTTTCCGGTGTACTTGACCATGTACAAAGAGCCCAAGGAGGGGTATGGTTCGCGTAGCGGTTGCCTGAAGCGGTTCAATACGTTCTCATGGGTGCACAATTCGATGCTCAAGCGAGCGCTAGCGAAGCTCCGTGCCAAGCATCCTGGGGTGAGGATCATTTACGGGGATTATTTCACGCCGGTTGTCCAATTCTTGCTTCAGCCCGAAAAGTTTGGATTTTACAAACAATTGCCTAGAGCATGCTGTGGTGCTCCTGGGACGGGACCTTACAATTTCAATCTGACGGCCAAATGCGGTGAGCCTGGTGCCACTGCATGTGCTGACCCCAAGACACACTGGAGCTGGGATGGTATTCACTTGACAGAGGCCGCATATGGACATATCGCGCGAGGTTGGTTGCATGGCCCATTCGGGGATCAACCAATCGTACAGAATTCTTGA</cdnaseq>

Protein Sequence

<aaseq>MARPRRRGGAGTWVAAVLAAALQVLAVSAAGKYRAVFNFGDSLVDAGNLVTDGIPDYLATARPPYGQTYFGYPTGRCSDGRLVVDFIAQEFGLPLLPPSKAKNASFARGANFAITGATALDTDFFERRGLGKTVWNSGSLFTQIQWLRDIKPSFCSSTQDCKDFFAKSLFVVGEFGGNDYNAPLFAGKDLREAYNLMPHVVQGISDGVEQLIAEGARDLIVPGVMPSGCFPVYLTMYKEPKEGYGSRSGCLKRFNTFSWVHNSMLKRALAKLRAKHPGVRIIYGDYFTPVVQFLLQPEKFGFYKQLPRACCGAPGTGPYNFNLTAKCGEPGATACADPKTHWSWDGIHLTEAAYGHIARGWLHGPFGDQPIVQNS</aaseq>

Gene Sequence

<dnaseqindica>1..262#372..587#690..838#916..1189#2593..2819#ATGGCGAGGCCGAGGAGGCGAGGAGGCGCCGGCACGTGGGTGGCGGCGGTTCTTGCTGCGGCGCTGCAGGTTCTTGCGGTGTCCGCCGCGGGGAAGTACAGGGCGGTGTTCAATTTCGGGGACTCGCTGGTGGACGCCGGCAACCTGGTCACGGACGGCATCCCGGACTACCTCGCCACCGCGCGCCCGCCCTACGGCCAGACCTACTTCGGCTACCCCACCGGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCATCGGTATCAACCATTCGCTTCCTTCTCTTTTTCCTTCCGCCCGCATTCCTCCTCCTTGGCCTCGGAGCATTTTGACGGATTCGGTCTTCTTCTTGCCACCGCGCGCGTCCAGCGCAAGAGTTCGGCCTGCCGCTGCTGCCCCCTTCCAAGGCCAAGAACGCCAGCTTCGCGCGGGGCGCCAACTTCGCCATCACCGGCGCCACCGCGCTCGACACCGACTTCTTCGAGAGGCGCGGCCTCGGCAAGACGGTCTGGAACTCCGGCTCCCTCTTCACCCAAATCCAGTGGCTGCGCGACATCAAGCCCTCCTTCTGCAGCTCCACCCAAGGTGAATACGATTCTCTTTTGACTAGCCACATTCCGTTCTATGGATGTTAGTAATTGATTTCTGATCTTTGATGTTGTCCCCCCTCTTCTCTTGGTTCCAAAGATTGCAAGGATTTCTTCGCCAAGTCCCTGTTCGTCGTCGGCGAGTTCGGCGGGAACGACTACAATGCGCCGCTCTTCGCGGGGAAGGACCTCAGGGAGGCCTACAATTTGATGCCTCATGTCGTTCAGGGCATATCCGATGGCGTTGAGGTAGCAATTGCATCTTTGCTGTTGTTCACAGTGCTTGATGTGTGGAGCTTTGCTCTGATTGCTGATGTACATTGCAGCAACTGATTGCCGAGGGCGCGAGGGATTTGATTGTGCCCGGAGTGATGCCATCCGGTTGCTTTCCGGTGTACTTGACCATGTACAAAGAGCCCAAGGAGGGGTATGGTTCGCGTAGCGGTTGCCTGAAGCGGTTCAATACGTTCTCATGGGTGCACAATTCGATGCTCAAGCGAGCGCTAGCGAAGCTCCGTGCCAAGCATCCTGGGGTGAGGATCATTTACGGGGATTATTTCACGCCGGTTGTCCAATTCTTGCTTCAGCCCGAAAAGTTTGGTGAGTTCCTCGGTCCCTTATGTTTTGTTGTAGTAAGGCAATGAATGTTGTAATACCAATTTGTTGATTTGATTGGCTTCTACTGTGGGAGGGAATTTTTAGTCTAATGACTGATACGACTGAGAATTAGCTTTGTTAGTGGCCTAACACTTCTGAAGTACCTTATTCAACATCAGTTTATCAACAGCCACACTTACCGGCTTATGTTCTGTTGAGATGTGCAATGCGCTAAACTATAGCTTGAAAACTTAGATCTAGGTATTGATTATTTGGTGTCTTGTCTGTGATTGATCATGCTCTGAAGGGCCTGATCTGCTTCCAAAAGTGGTATTATTCACTGCTCAAATTTACATGTCACAATTGCTTGTAGTGCTTTTTTTTTTAATTATTGTTTTGGCACTTTGAAATTATATATTGCTAGCAGTTTCAGTTCTTAATTGTCCATGTTCTCCCAAAAGCTTGGGCAACATCCACAGATGAGTCTTGCTTTTGAGATCAAAAGTTTATTTTGCCCATACAACCTGGGCAGCTCAGATCTTGACCTTAGCGATTAAGTTATTGAACACATATAAAATTATGGCCAGAGTTGGTCTTTTCTAGGAGCTACATCAAAATCCTAACCTCAATATTATTTGCAACAGAAAATTTTAACCTGGTGTCAAAAGAACCGTAAGGACCTGTAAAGTGTTTTCATAGTTCAACTTAAACTATTTAGAAGTCACCATCTTGAATTGAGAAATGGCAAATGCTTCTCTCGAATATATTTCTACCCTGGTACTGACTCCTTTTTTTATATTTCTGAATAAAACTTCCTGAAGCTCTTAATCTCTTGAACTATAAGTACCAGGCCATCACTAACTGAGCTGACTGACCAGTTTGTGACCCAGCAGTATTTTCATATCATGGCTCTTCTCATCTCTTGGATTTAGTGGTTTACCCCTCTTGTAGAAAAAGTTACATATACTGCTAGCTACTCAAGAAAGGCTTGCATCTTGGTGGGCCTGATATTCTTAAAGATTTTTTTGGACTGCATTCTGAATGATTAGAGAAGTGAGGCACATATTGGTGACATATCTGTGTCGGAAGGAGAATCTTATACTGACCGTTTTGGGACATCAATAGATGGGCACATATTTGTCCATGGTCCTATTATCTCTGTGTTATTGGCAACAGCAGCATGGTTGTCCTTTATTTTCTTGAGCTGATTTCATCAAATTATTATTTATTTTCATGACATTCATGATAGTGATAGTATTTTGTCCTGACTTCATGTTGATAAGGAGGGAATACATCCTTGCTCATATAAGCAGGATATGCATTTATTCCAAGAAATAGACCTATGGTTTTTTCTTGTCCAAGCGGATACAGGGAGTTGGTACCTGACTTTTTTGCTCTAAATCCAGGATTTTACAAACAATTGCCTAGAGCATGCTGTGGTGCTCCTGGGACGGGACCTTACAATTTCAATCTGACGGCCAAATGCGGTGAGCCTGGTGCCACTGCATGTGCTGACCCCAAGACACACTGGAGCTGGGATGGTATTCACTTGACAGAGGCCGCATATGGACATATCGCGCGAGGTTGGTTGCATGGCCCATTCGGGGATCAACCAATCGTACAGAATTCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021112