BGIOSGA021226

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Revision as of 12:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021226| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021226, complete gene.| tag = OsI_230...")
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Gene Name

BGIOSGA021226

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021226, complete gene.

LocusTag

OsI_23007

Ensembl Transcript ID

BGIOSGA021226-TA

Ensembl Protein ID

BGIOSGA021226-PA

Length

7571

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:17353814..17361384

Sequence Coding Region

17361193..17361384,17360986..17361076,17359959..17360034,17357366..17357417,17356932..17356976
,17355849..17355992,17355171..17355290,17353814..17353936

Genome Context

<gbrowseImage1> name=IndicaChromosome06:17353814..17361384 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:17353814..17361384 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGCGGCCACCAACGCCAAGCACGGGGGGCCCGGGTTTCCGGTTCACGCAGGAGGAGGTGGCCGAGATGGAGTCGCTCCTGCGGCATCTCAACAACGGCATCCCGGACGGCTCCTTGATCCAGTCCCTCGCCGACAGGTTCACCGCCTCCGCCGCGCGCGCCGGCAAGGTCGGCGTCCGGTCCAAGCAGAACCGGAAGTACTCGCAGCGCTCTAGGAACTCGACCAAGATGCTACTGGCGGCGTCCGGCGACCACAAGTCGGCCTTCGCGCGCTCCTCAGTTCAAAAATCAGTAAAGAATTCTTTGGAGGGTGGCCAGCTCGAGTTTGAGGCAAAGTCCGTTAGAGATGGTGCATGGTATGATGTTGCTGCCTTCCTTTCCCATAGATTGTCCCAGTCTGGTGAACTGAATATCATCAGTACCGGCACTACCATTGGGATGATTGGGGCGCTGGAAGTATGGGTTCGATTTTCTGGATTTGGAGCTAGGGACGACGAATGGATTGATGTCCGTACATGTGTGCGGCAACGTTCTCATCCATGTGTGTCAACCGAATGTGCCGCTGTTCTTCCTGGGGACCAAATTCTTTGCTTCCAGGAAGGCAAACATCAGGCTCTGTATTTTGATGCTCATGTCCTTGATGCTCAAAAGCGTAGGCATGATGCAAGAGGTTGTCGTTGCAGATTTCTTGTTTGCTATGATCATGATGACTCTGAGGAAATTGTTCCACTGAGGAAGATGTGTCGTCGGCCAGAAACTGACTACAGACTTGAGATTCTACATGCTGCTGGAGCAGCAAATGCTGCTAAAGAGGCTGTGGTTGATTCGGTGATTGCTTAG</cdnaseq>

Protein Sequence

<aaseq>MGRPPTPSTGGPGFRFTQEEVAEMESLLRHLNNGIPDGSLIQSLADRFTASAARAGKVGVRSKQNRKYSQRSRNSTKMLLAASGDHKSAFARSSVQKSVKNSLEGGQLEFEAKSVRDGAWYDVAAFLSHRLSQSGELNIISTGTTIGMIGALEVWVRFSGFGARDDEWIDVRTCVRQRSHPCVSTECAAVLPGDQILCFQEGKHQALYFDAHVLDAQKRRHDARGCRCRFLVCYDHDDSEEIVPLRKMCRRPETDYRLEILHAAGAANAAKEAVVDSVIA</aaseq>

Gene Sequence

<dnaseqindica>1..192#309..399#1351..1426#3968..4019#4409..4453#5393..5536#6095..6214#7449..7571#ATGGGGCGGCCACCAACGCCAAGCACGGGGGGCCCGGGTTTCCGGTTCACGCAGGAGGAGGTGGCCGAGATGGAGTCGCTCCTGCGGCATCTCAACAACGGCATCCCGGACGGCTCCTTGATCCAGTCCCTCGCCGACAGGTTCACCGCCTCCGCCGCGCGCGCCGGCAAGGTCGGCGTCCGGTCCAAGCAGGTAATAGCCCGTGTGTCTCCTTTCCGGTGGGGAATTCGATCGCTTATGTCCTTAATTCTGACACGTCGATCCGGGCCGGGGTTGGTGGTGCGCGGGAGGTGTGGTACTGGTTCCAGAACCGGAAGTACTCGCAGCGCTCTAGGAACTCGACCAAGATGCTACTGGCGGCGTCCGGCGACCACAAGTCGGCCTTCGCGCGCTCCTCAGGTGACTTTTCAATTGCTAATAACTTGGGTGTTACTTGCGCTGTGTACATTGTGCTACTATAGTTAATTAGTATTGTAAATATTCATTCGGGCATTCACGATGTTACATGCAAAGTAACCTTCAGAAATAAAATATTATTTTTGTTCTACCTTTATGTATTAGGAGAAGAGAAAGCAAGAAATATTGCTATGGCTGACTTTAAGCTTAAGGCAAGAGCATAAGAAATAAAAAAATTAGTTCATGTCTTTAACAACATGCATGGTGCTCTTTCATCCATGTTAAATAGAGTTTTTTTCATGAGTGAGTCCCAGTTTAAGATCAAGAAAAGACCATAACATAAGGCTGTAGGTTCTATCTTATTTCTCTAGTGACCTTAAATATTGAGGTTGCCCTTCGCATACTTAGCACTGTTTAGGGGTTTAGAGCGATGAAAAATGCCTTTGCCGTATGTAAGATTAATTTGTGCAATGATTCATGGCGCGTACGACCCTTAGCATAGAAAGGGGTTGGTTCTGGACTTCTGGTTGTGGGTGTTACCATGATATTATATAGTAGTACGTGTTTTGCTCGTCCGTGCAAGGTTTCTTCTGCATCTGTGTTGGGCTTTGCAAGCTGTGTTGTTACGGTAAAGCTTGATCTGCCACACCTTTTTTTTTCAATCTCGAATATCAGAAGTCAGTAATGCATCTTAATATAACTAATTTAAATAAGATTCAACATCTTTCCCGTGATTTGTTTTTTCTTAGTTTTTGTGTCTCCTTCCGGAGTTTGTTCTTATGATTTTAAAGCGCTAGTTTCTATTTGCCTGGAGATCTTTCCTAAAAATAAAATCCCTGGTGATGCAAGGTTAGAAATTTCCTATGAATTATTTCCCTGTATCGGTTTTCCCCTCTCCGTTGCCTCCTCCAATCTTCAGCATTCTTCTTTATCCTGTGATTGTTTATTTTGAAGTTCAAAAATCAGTAAAGAATTCTTTGGAGGGTGGCCAGCTCGAGTTTGAGGCAAAGTCCGTTAGAGATGGTGCATGGTACGTACATATATCCCCTTGTTCAAAAAAATGATTGGTATTTTACATTGGTTCGTGTAATTTTGCTGACAGTACCGTACACATAATTATCAAACCTGTGAAAGGGCACATAGCATAGTGGTTGCAGTGACATGAGTAGCACCCCAACGTTCTGAGTTCAAATCTCCATAAGAGCGAATTTCAGATTGGTCTATTTGAGAGCTAAGTTCTCTATCTAGTAGGCTAAGAGCATCACCAAGAGCTTCCTTATTCTATTCCCTATCCTTAAATTTAGAAAATTTTAGTCAAAAATTACATCCAATAGATTTTCTAACCTATCTCCCAGTAATCCAGGTTCCCAAGTTTGGATATCTTGTTACCCACATTCAGGGAGCGATTTTTTCTTCCCAATCGCCGTCTTCGCTATCTCGCGCGCGCAGGGGAAAAATATTCCCGCGCCCCTTTTCTCGCTCTTGGTCTTCCTCGCAGGCGTTAGCGACATGGTAGGGGAAGGAGAAGCTGGCGGAGAGGGGAATCAGGGGAGATCAACAACCAACAGGCGGCTCTGACAGATCGAGATGGGGAGATCAGCGATCAAGAGAGATAGGAGATCGGCTTCTGGCGTGCGTATGGGAGGAGAGAAAAAAACTGATTTTTTTTTGTTGCTGTTGGTTAAAGGGATGGCCCACTTTTAATTATAGGAAATTAATTTTAGGCTATCTCTTCGAAAGAATAGTTTTCTCACTTCCTATATTCAGTTTAGGATATCCAAAAACCATAGGTTTGGGAATGAAATATTAGGATACTCTTGGTGATGCTCTTAAGTTCCTAATTTAAGAGGCTGCATATATCCAGTTGGATGTAGAGGTCGGGTAAAAAATACTCTTCTCTAGAAAAAACATAATTATCAAAACCGAGCCAGAATGACGGTCTGACTGCAATAAACCGGACATAAGGTTCTGATTGGGCCAAGCCAATCTAATCACTCTATAAGTTTAGCACTTATAGCACTACTAAGGAATTGATTTTTTTTCACAAGATCCCCTCCAAGCTCCAAGCGAGCCATAATTATATTCACGTGCACAAATATTTGAATGCGGTTCGGTTAAGGCCCACCTACGAAAATGAATTTTTCATACGCGTGTTAAGAGGCTGCTTGCGGAATTCCTTCTTCTCAGGTGGTGTGCAACGGCCGGCCTCATTCGTTCGTTTTTTTTCCAAACCATGCGCCTGCACTTCCCACATCTACTTTTCAGTCGCACTCCTCTCTCTCATATCCTCCACTTGCCACTCATCTCTCCCACGCTTCCCTCATTTCCCCATCCCCCTCTCTCTCCCATGCTCTCTCTATGCGGTGGTGTGGTGACGGTGACAGCCTCGGGTAGCAAAAGCGACCGTGGCATGGGAAGCCTCAGGAGCACCAGATTTGCATCCAGTGGGTTTGGGAGCAGTGGATGCGCCCTCGTGCAAGCGGAGATGACGGGAGGGCCGCATGGTGACCATAGCACTGGGAGCGAAGACCACGACCAGGGCAGGAGGTGTGCAGGCTTGGAGCGGCGGATCTAACACCGCATGGCTCAGGAAGAGCGGATATGTTGCCGGCGGGCTCGGGAGAGGTGCATCCACCGCCGACAGTCTCAGGAAGAGCAGATCCGCTGCTGGCAGGCTCAGGAATAGCGGATCCGTCCTCGCACACAAAAAATCGAGCCTTTGCAATTGGTCTCCTTGGACGTCTGTCTGCGAAAATGGTTTTTCACATGTGGTTGTGACATGTAGACACCTGGCACCCACCTGCCTACGAAAATGTTTTTGGCCGTATGCGAAGATCATTTCTATGCTAATGTGGTCACTGGTATGATCTCCGACTCAGTAAGCTTAGTTCTATGCTAGTCGCAATGAGAAATGTATGTTTGTTGTCGTCAAAAGTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATATACCTAGAATCAAAAAGTAATGAAAACATGTTTAAATTCAGTTCAAACTTGTTTTGAACTAATTAGTAAAGTAGTTAATGTTAATACGTAAACATTTAAAAAAATTCAAACTCATTTAAATTGGTTATATACTCAATTTCAATCTTGATGCCCGAGCACAATGGTACGACAGTTAATTTTCCCAACCATTTAGCGCATGCATCTCTTATTTCTTAAATCCTTTTTTCTTTAACCACGGAAGAGCTTTTATGCACTATGTTATTGAAGGTGTTATATACGTTTTACTCCCTCTGTTTTTTAATATATGACATCATTGACTTTAGATGTAATATTTGACTTTTCGTCTTATCAAAATAATTTATATACAATAAAACTTTAATTTGCTGGACTGGTTTTATCATCAAACACACTCTAACATTTTTTTTACATATTTACACTAAATTTTTGAAAAAGACGAATAGTCAAACCTTATACGAAAAGTCATATGATATATATAAAACTGAGGTTAGTATGTCCCTATTTTGAAAGCCTTGCACTTTCACGTGCCTAACAAAGATTTTACATATTGCAGGTATGATGTTGCTGCCTTCCTTTCCCATAGATTGTCCCAGTCTGGTGAACTGGTAAGAAACATAAATTTTTCGTTATATATGGTTAATGTTGCAAAACTCGTCTTTTGCTTTCTTAATGAAAGCAATTTTCTGCTTTCAACCTAGATGATTCCATTTTATCGTTTGTCAAAGTACGATTTGCGAGATTTTATCTTTTTTTTTTTTTTGTCAATGTACCAGGGTGTTAATATAACTTTGTGAACATTGTGTATCTGCTAGACCAGGCCTTACATAAAAAAAAAACACTAGAGTTGAATAAATTTGTTTTTTCTTCTCAACATATGCCAATATACAAAAGGAAATTTGTAGATAATTAAAGATTTTTTATTTTTTTCCATATAGTTGCGTGTTGGTCTAGTACTAGCAGAATTTCTGTAAAATCGTGTATGTGTGTACTATAGAATATCATCAGTACCGGCACTACCATTGGGATGATTGGGGCGCTGGTGAGGAGGGCTCATTAGCTGGTTGATGAGCCGGTTTCCCAACTGGCACTCCTGAGCCAAAAATAAAAAGAATAGGCTGGTAATATAAACATTAATGCAACCAAATCCAATGCACATTTGCCACCAAATCCCCATCCATATTTGCAGATTAAGAACGTGAATTCCACATCCAGAGGTCAAAGATGAGAACAACCACATCACAAATCAACAGCAGGCTATTGACATTGATTGATTCAATTATTCATCAACATCATCAATAACTGCAAAACCACATCACAGACCAAATCCAACTGCCATATTAGAAGTACAACAGAACAACAACACTACTAAATGGAGTCACTGCCAACGCCATCGTTGATCTCCCTCGCAGCCGTTGTCAACCTCAAACTGCACATGCCATCCGACCATTAAGGAGAGGGGGAGGCCGACACCACTCATTGGACCATGTGGTTGTCGCCCCTGTCCTTAAGGCGGCTAGATCTGGTGGCCTAGCCATCGGGAAGAAACAGGTGACTGCGATGGTGGCGTAGAATAGTGGAGAGCTAGTGACTAAGAAAAGGGGAGGCGCAGGCGATGGGGTGGAGGGGAGGGGGGGGACAGGGGAGGACGCTGGTGGTGCAAAAGGTGGACTAGCACTGATGTCCTCGTATCAGTACATGTATAAAAAACCAGGACTAATACGTATTGGATGCATCAGTGTAATTTTATTTTAATGACCAATACTGATGACCTTATTAGTGTCAGGTGTTTTTTTATGGTGCACAAAGGTTGAGATGGTGGGAAAACCCCTATCAGTGCCGGGTTTTAACTAACCGGCATTGATGGGGCGGCAGTGATTACATGTTTTGTAGTAGTAGTATCATATATCTGTGTTACTTAGCTTTGTTAAAGGCATGTATATTAAAATAATTTCTAATAGAACAATTATTTGTATTTTAGGAAGTATGGGTTCGATTTTCTGGATTTGGAGCTAGGGACGACGAATGGATTGATGTCCGTACATGTGTGCGGCAACGTTCTCATCCATGTGTGTCAACCGAATGTGCCGCTGTTCTTCCTGGGGACCAAATTCTTTGCTTCCAGGTCTGGCCATGTTTTACTTTTATCAGAATTGAAGTCTAGTTGTATCCATTCAGAATTTTGACTTGAAGTTAGAAAATGATGGAAGGGTGTTTTCTGTTTGCTCTACTCTAAGACGATATTTTATTTTTACATTAATTCTTTTGCCAAAATAAAGGATGTCTATTCGTATAATATATTTCTGTAAAAACAGAAGGGGCATAAGCTAGGGGAACATATCCTATGCCCACAAGGCTTCTCGTGTACAGACTGTGCACACTAACTTAAAAAAATTCACCAAAAAATATACATGTACTTTCAGTAGTATTACATTTACATGTAAAGTCTCATCTTTAAATTCATATCCCTAAGTGGAGAGATATAGGCATAATTTTTTCATAACTTTGATAAATGTGAAATAAAATGTTGTTCCAAAAATACAGATGGGCGTTAAATATTCTTAGTAGGTGAATCATATCATTGGTTTGATCTTTGTTTTCTCTCAATTTTTCTTTTAAAGTACTATTACTTACACAAATTGTTGGCTCACACCAATAATTACATCTACCCTAAATTTACCAGGAAGGCAAACATCAGGCTCTGTATTTTGATGCTCATGTCCTTGATGCTCAAAAGCGTAGGCATGATGCAAGAGGTTGTCGTTGCAGATTTCTTGTTTGCTATGATCATGATGACTCTGAGGTATGTCATTCACTCCGCCCATTAAATTTGATGTGACCATTGTAGTAATGCATGCACTAAGCATCATGTTTTAATTAAATTATGTACTTCCATATAAATAAGCGCTGTAGTTCTTGAAGCATGGTTGTAGTTTGAACTCGCATAAGCAATTTCATGTTTGTTCAACCAACAAGTTGAAGGAGCTTATATATATGCATGTAGCAATTCATCATTCCATAACAACGTATATGAATATTTTTTTCTATGTTTGTAAAGTTGTTATGGAATTTATACCGATGAGAATGTCTACAGTACGATTTATTGGTAGTATAAAGAAGGGAAGTTTAGGAGTTTGCCACAAAAGTAAAAAAATATGATATTTTAGTAATCTTATGCTTTAGTATTGAGTCATCCAGTTGTGGTAATTGGTGGAGGGACATGTGGATTCACGGTAGCTGGCACTGGCAGCGCCTTGCCATTGTCATTGTGAAGGATGACAATGAATAGGAAATTGGATCTTGTAGGAAAAACACCTACCATTTCCTTGTAGGCCATGAATTTACACAATCGCCCCAATCCAATAGTATAGAAAGAAAATAAATTTTATCCAATTCACACAATTGCCTCAATCAAGTAGTATAGAAAGAGTACATATAAACCCTTGGATCACCTATATTGTCAATACAAACTAACAGTAGGTTGGACTCTAAAAGTTCCCATTTTACTATATATGTTCATATATTAGTTTGTGTATGTTTAACCCATAATAGCTAATTGGTCATGCGCTGCAGCAAATTCCTGAGAACATAGCAAAATCAAGTTTTTGTTAAAAATATGTGTATTTAGTTGGTTCAAACAGTACTTTTTATATTAAAAACAAACAAAATGCCATGTTTAGAAAATTAAGGAGCTGCAGTCCACGGAAGACAGACTAGTAGATTGACTTATCCAAATCCTAATATCATGGCCTATGATGGTGGTAGTGGTGCCGGTAGAACCATGACCACCGCTACTCTCTTTTAGTTTAGTAGTATACATTATCGCTATATAGGTTAGTGTCATTGTTTATGTTCCTGTTCCATAAGCAATTTCATTTCTTCTCTAGTAACATGTGCTAAAACACTACTTTATTGGGAGTGTAAAACAATACTTTTCTGCTATATTATCCAGCTGCTAGTTGTATAACTGAAACATAATGATTTGTTACTACATGTATCTCCATTTATTAGTATTTATGCTTTGTTTAAAATGGCAGGAAATTGTTCCACTGAGGAAGATGTGTCGTCGGCCAGAAACTGACTACAGACTTGAGATTCTACATGCTGCTGGAGCAGCAAATGCTGCTAAAGAGGCTGTGGTTGATTCGGTGATTGCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021226