BGIOSGA021239

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Revision as of 12:58, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021239| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021239, complete gene.| tag = P0618D1...")
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Gene Name

BGIOSGA021239

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021239, complete gene.

LocusTag

P0618D11.21

Ensembl Transcript ID

BGIOSGA021239-TA

Ensembl Protein ID

BGIOSGA021239-PA

Length

3863

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:17098177..17102039

Sequence Coding Region

17101983..17102039,17101129..17101314,17100875..17100982,17099267..17100426,17098177..17098951

Genome Context

<gbrowseImage1> name=IndicaChromosome06:17098177..17102039 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:17098177..17102039 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAATAATAATGATGGAGTGATTGGAATATCCCGGCGTAATTCTAATCCAAAGGTTCACAGCTCAATGTGCAGTGAATTGACAATGATGTTAGATAAAGTCTCTTCTATTATTCCCTCAATCGAAACTGCTCAACCAGGATGTAAAGCGGGTATAGAGGAACTATGCAACCTGTACAACATAGTTGACAAAGGAAAACTCATAATCCAGAACTGCATTGAGTGCAGTAGTCTTTACTTGGCTATTACAGGGGAGGCAACTGCAATGCGGTGCGAAAGGATAAGAGATGCGCTGAGGCGAAGCTTGTTCCTGGTTCAGAATATGGTCCCGTCATCATTAGCTAATCAGGTGGCTGATGTTCATGATGATCTTGGGGATGTGAAATTCATTGTTGACCCAGAAGAAGATGAGGCTGGCAAAGCCATTTTGGAGATGCTTCGGCAGTCTGATGCAACCCAAGAACATGAACTCCAGACTTTCTTGTTTGCAGCGTCAAAGTTAAATTTGACGTCACCAAAGGCTATCTTAATTGAAAGACGAGCAATCAAGAAACTACTGGACAAGATCAATGGTAATGATCCCAAAAAGGAAGGAATACTCAAATTTTTTCAATATCTAGTTAGGAAATATGGAAAGACTATGAAGCCTGAGGGTAGTGCAAAGAATGAAGGTGTGGATGTTGCAAACGTTACTTCGAGTACAAACCTAATTGCTAGTGGTACTGATGCTCCACAGAAATGCTTTTCACCTACAAACTCTTGGACTGGAAGATGTGAAGAGCAGAATAATTTGTCACGATTTTCTACTCCTCCAGAGTTCTGCTGCCCACTATCTATGAAGCTGATGTACGATCCTGTGATAATAGCATCTGGACAAACCTATGAGAGAGAGAACATTGAGAAATGGTTCAGTGAGGGATATGATATTTGTCCTAGGACACAGTTAAAGTTAGAAAATTTCACGATTACTCCAAATACTTGTATGAAGGCTGTGATCTGCAACTGGTGCAAAGATAATGAGCTTGAATTCACTTCTTTACCTGAACAATTTCATAGTTACTCTGTTTCAAGTCTACACAATATCTCAGCACCTCTAGTTGCTGGAACAAAGAGAGATTACATGTCTGATCATAGCAGTTCATCTGTTGCATTATCTGGTGCTAGTTATGTATCATCTCCAATGCGGGAAACAGAAGAGTCAAGGACTAATTCTACTCAGTTTTTTTCAAACGCTTATTACCAGTTGTATTTGTCCTTCAGCAGCTTCAACAAGGAGATGTTTCTGAATTTCTTTTACGAGCTGTCCGAGCTTCCAATGGAACTTCAAGTGAAGGCTGTCAGAGATTTCAAAAGTGTTCTGAATCGTGAATATCAAATTTGGCGTTCTATGATTTCCAATGGTTTTTTAGAAGCATTTCTTGAGTTTCTTAAGAACGATAATGGAAAATGCACAATGGAAGCTCAAAGAACTGGCATTCAGTTTTTTCTTGCTTTTCTACGTAATAGCAGGACCCAAATTCCATCCATTAGTGAAGATGCAGTGCGTCTCGTTGCTTCATTTCTTGATTCAGAGTTAAAAACTGAAGCATTGGAGATACTCCATGAACTGCTGCAGCAACCAAGTTGTCGGAAATCTCGTCTCATGGCATCTGTTGTTGCTCCATCTGTGTTTCTAGCTTGGGATAGTGCAGACTCCCTGTGCCGAGAACTAGTTTTGAAGATCATCTGCGAGCTTTCATTCAAAAATGATGTACAATCTTTCCTAATTTCTTCTGGAATAATCTCAAAGCTATCTCCAATTCTCAGTCAAGGGAAATCGCCTGAGTGTTGCCTAAAGATTCTACTAAATTTAAGTGAAGGGAAACAAGCTGCGGATCTCATTATCAGAACTGATCAATGCCTCAGTTCTATTTCAGATTATCTGGACACAGGAAGCTCTGTGGAACGCGAGCATGCGTCAGGTATCCTTCTTGCCTTATGCTCTCGCAGCATCGACGATTGTGTTCTTGTCATGAAGGAAGGTGTCATCCCTGCGCTGGTCGATTTGTCGGTCAATGGAACTGAGGTTGCAAAGGCTTCTTCAATCAAGTTGCTTCAACTTCTCAGGGACTCTAGACAAAGCGACCAGTTTGGCAATTCATGTTCGAGTGAGGTGGCTGTCAATGGTGCAGCAGAGAATTCGCCCATTGGCACGATCTGCAAACAACCAATATCAAAATCAGCTCGGTATATCTCAAGAAAGCTCAGCATTTTCTCGAAACCTCGATCGCTGACCCTCGTCTGA</cdnaseq>

Protein Sequence

<aaseq>MENNNDGVIGISRRNSNPKVHSSMCSELTMMLDKVSSIIPSIETAQPGCKAGIEELCNLYNIVDKGKLIIQNCIECSSLYLAITGEATAMRCERIRDALRRSLFLVQNMVPSSLANQVADVHDDLGDVKFIVDPEEDEAGKAILEMLRQSDATQEHELQTFLFAASKLNLTSPKAILIERRAIKKLLDKINGNDPKKEGILKFFQYLVRKYGKTMKPEGSAKNEGVDVANVTSSTNLIASGTDAPQKCFSPTNSWTGRCEEQNNLSRFSTPPEFCCPLSMKLMYDPVIIASGQTYERENIEKWFSEGYDICPRTQLKLENFTITPNTCMKAVICNWCKDNELEFTSLPEQFHSYSVSSLHNISAPLVAGTKRDYMSDHSSSSVALSGASYVSSPMRETEESRTNSTQFFSNAYYQLYLSFSSFNKEMFLNFFYELSELPMELQVKAVRDFKSVLNREYQIWRSMISNGFLEAFLEFLKNDNGKCTMEAQRTGIQFFLAFLRNSRTQIPSISEDAVRLVASFLDSELKTEALEILHELLQQPSCRKSRLMASVVAPSVFLAWDSADSLCRELVLKIICELSFKNDVQSFLISSGIISKLSPILSQGKSPECCLKILLNLSEGKQAADLIIRTDQCLSSISDYLDTGSSVEREHASGILLALCSRSIDDCVLVMKEGVIPALVDLSVNGTEVAKASSIKLLQLLRDSRQSDQFGNSCSSEVAVNGAAENSPIGTICKQPISKSARYISRKLSIFSKPRSLTLV</aaseq>

Gene Sequence

<dnaseqindica>1..57#726..911#1058..1165#1614..2773#3089..3863#ATGGAGAATAATAATGATGGAGTGATTGGAATATCCCGGCGTAATTCTAATCCAAAGGTATGGATATTGGACCGCTGAAACTTTCATCTTTTAGTAATGTTTCTTGTTACCTGTTGCCGTCCATGTTTTGTTTGGAATATAGGTTCTTATGATATTGCTTTATCATTTGCATTATTTGATTGGTTGGAAATAGTTTTGCGTTGCTTTCTTAGTACCAAAAAGATCTATGGGTATGAAATTTGAGTTCTTTAAGGTTTTATCCCTGAGTAAATATCATTAATTGTGTAACATGCACACAAATCTTAGACTACACATCACTATAGATGGTAAATGCTGTGTAAAATTGTGACTCCATGGCAAGAATTTGAGACTACCTCAATTGGTCACATATCCAGTTCAAATTTGGGAGTGTTTTCTTTGTCTGATTCAAGATAGATGCACAATAATTTCCTCATAAAGATCATATCTTTGTGTGGCATAAAGAACATATCTTTGATACAAACATTTTTTCTTGCATGCTTATCTATGATATGATGTGATTCCTTTGTACCTGTTGAGAGGCAGAGTTAAAACTGCAGTATTTCAATAAGATCATTATTTGATGTTTCATATAAATATTATCATTTACTTCATAGATAGTTTTCAGTAGTGATTATCTCCCCATTATATATTCTTCAACATTTTATTACAGTTAATGCAATTATTCTTTTGTCTTTCTGTCTTAGGTTCACAGCTCAATGTGCAGTGAATTGACAATGATGTTAGATAAAGTCTCTTCTATTATTCCCTCAATCGAAACTGCTCAACCAGGATGTAAAGCGGGTATAGAGGAACTATGCAACCTGTACAACATAGTTGACAAAGGAAAACTCATAATCCAGAACTGCATTGAGTGCAGTAGTCTTTACTTGGTATGTTGTTCTTTAATATTGATAAATGAGTCATTATGTTCAGGAAACTATAATGACTCCTCTTGTTTTTATCTTATTGTTTTATTTGAGATTGTTTTCCTGGTTTCTGAACAATTGCTTTCTGATACCAAATTTGCACATCTCAGGCTATTACAGGGGAGGCAACTGCAATGCGGTGCGAAAGGATAAGAGATGCGCTGAGGCGAAGCTTGTTCCTGGTTCAGAATATGGTCCCGTCATCATTAGCTAATCAGGTTAGTTTACTTAATTGAACTGATAATAACAGGCAAACTTTTTCTACATTGCACAGCATTAACCACATGGTTTGCTGTGTTAAAAGTTTGAAGCTAGTGATGACACAAACAACATCAAACTTGCGTCTGTAATAGAGATGAAGCTCTCCTTGGACAGTACTTGCGTCTGTTATTTCTGGGGCATCAACAAAACCTAACAATTTCAGGATATTATTCACAAACATTTATCTGGAGGTTTAGACAGTACTGTATCCAGAAACATGATCTATGTTTTTTGTTGTTTCTCCAAAAGATTTTTTAGATTACATGGCAGATGTGTGAGTATAAACACACACATCAATTCTCAGGACAATTGTATCATCTCGATGCAATTTAATGAGTTCTTCCATTATCTAAATATCGCACAGATTGTCACATTAACATGTTTATACTTGACTATTTGTCTTAGGTGGCTGATGTTCATGATGATCTTGGGGATGTGAAATTCATTGTTGACCCAGAAGAAGATGAGGCTGGCAAAGCCATTTTGGAGATGCTTCGGCAGTCTGATGCAACCCAAGAACATGAACTCCAGACTTTCTTGTTTGCAGCGTCAAAGTTAAATTTGACGTCACCAAAGGCTATCTTAATTGAAAGACGAGCAATCAAGAAACTACTGGACAAGATCAATGGTAATGATCCCAAAAAGGAAGGAATACTCAAATTTTTTCAATATCTAGTTAGGAAATATGGAAAGACTATGAAGCCTGAGGGTAGTGCAAAGAATGAAGGTGTGGATGTTGCAAACGTTACTTCGAGTACAAACCTAATTGCTAGTGGTACTGATGCTCCACAGAAATGCTTTTCACCTACAAACTCTTGGACTGGAAGATGTGAAGAGCAGAATAATTTGTCACGATTTTCTACTCCTCCAGAGTTCTGCTGCCCACTATCTATGAAGCTGATGTACGATCCTGTGATAATAGCATCTGGACAAACCTATGAGAGAGAGAACATTGAGAAATGGTTCAGTGAGGGATATGATATTTGTCCTAGGACACAGTTAAAGTTAGAAAATTTCACGATTACTCCAAATACTTGTATGAAGGCTGTGATCTGCAACTGGTGCAAAGATAATGAGCTTGAATTCACTTCTTTACCTGAACAATTTCATAGTTACTCTGTTTCAAGTCTACACAATATCTCAGCACCTCTAGTTGCTGGAACAAAGAGAGATTACATGTCTGATCATAGCAGTTCATCTGTTGCATTATCTGGTGCTAGTTATGTATCATCTCCAATGCGGGAAACAGAAGAGTCAAGGACTAATTCTACTCAGTTTTTTTCAAACGCTTATTACCAGTTGTATTTGTCCTTCAGCAGCTTCAACAAGGAGATGTTTCTGAATTTCTTTTACGAGCTGTCCGAGCTTCCAATGGAACTTCAAGTGAAGGCTGTCAGAGATTTCAAAAGTGTTCTGAATCGTGAATATCAAATTTGGCGTTCTATGATTTCCAATGGTTTTTTAGAAGCATTTCTTGAGTTTCTTAAGAACGATAATGGAAAATGCACAATGGAAGCTCAAAGAACTGGCATTCAGTTTTTTCTTGCTTTTCTACGTAATAGCAGGTGAGCATTCTTGTATAATATATTCTCCTTGTGTTTGGCTGTGTACAACCATGTTGGATGTAGAGCTCTGGTTTTAATTCATTAATTATCTAAAAATCTCCTTGTGCAGATTTTACTGTTGACAAACATAAGATATTTCCTGTTTCTACCTTTTTCAATAAAATTCCATAAATAAAACTGAGTGCCCTATATTTATCCTCCAAAAACGAAGATTGTTTTGTGCTAATTTTTAAAAACAAAGGGTTCAGATTATGGCAATTTGTTTTGTTTGTTCTCCAATAAACTTTTGTAACGGCTGATTTCCTTTTCATACAGGACCCAAATTCCATCCATTAGTGAAGATGCAGTGCGTCTCGTTGCTTCATTTCTTGATTCAGAGTTAAAAACTGAAGCATTGGAGATACTCCATGAACTGCTGCAGCAACCAAGTTGTCGGAAATCTCGTCTCATGGCATCTGTTGTTGCTCCATCTGTGTTTCTAGCTTGGGATAGTGCAGACTCCCTGTGCCGAGAACTAGTTTTGAAGATCATCTGCGAGCTTTCATTCAAAAATGATGTACAATCTTTCCTAATTTCTTCTGGAATAATCTCAAAGCTATCTCCAATTCTCAGTCAAGGGAAATCGCCTGAGTGTTGCCTAAAGATTCTACTAAATTTAAGTGAAGGGAAACAAGCTGCGGATCTCATTATCAGAACTGATCAATGCCTCAGTTCTATTTCAGATTATCTGGACACAGGAAGCTCTGTGGAACGCGAGCATGCGTCAGGTATCCTTCTTGCCTTATGCTCTCGCAGCATCGACGATTGTGTTCTTGTCATGAAGGAAGGTGTCATCCCTGCGCTGGTCGATTTGTCGGTCAATGGAACTGAGGTTGCAAAGGCTTCTTCAATCAAGTTGCTTCAACTTCTCAGGGACTCTAGACAAAGCGACCAGTTTGGCAATTCATGTTCGAGTGAGGTGGCTGTCAATGGTGCAGCAGAGAATTCGCCCATTGGCACGATCTGCAAACAACCAATATCAAAATCAGCTCGGTATATCTCAAGAAAGCTCAGCATTTTCTCGAAACCTCGATCGCTGACCCTCGTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021239