BGIOSGA021269

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Revision as of 12:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021269| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021269, complete gene.| tag = OSJNBB0...")
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Gene Name

BGIOSGA021269

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021269, complete gene.

LocusTag

OSJNBB0031F23.24

Ensembl Transcript ID

BGIOSGA021269-TA

Ensembl Protein ID

BGIOSGA021269-PA

Length

4358

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:15995769..16000126

Sequence Coding Region

15999854..16000126,15999609..15999770,15998834..15999509,15998348..15998482,15997678..15997812
,15996886..15997005,15996641..15996723,15996472..15996545,15996090..15996243
,15995887..15996006,15995769..15995801

Genome Context

<gbrowseImage1> name=IndicaChromosome06:15995769..16000126 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:15995769..16000126 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCAGATGCACTAGCAGACCTGGCTATTGAGCTTGATCTCCCTGCCAAATCTGACCTAATGGTCATCATTAACAAGATGTTACTACCATCCACTGGTCTGTATATCAGGCCCAAGGACGCATGGATTGGATCTGATCTTCAAAAGGTAGCAAGGATCAATTGGTCGAAGGCTGTTTTTGATGCCCTCCGCGACAACGTTATTCTACGGCACAAGAACAAAACTGGCCCAAGGCAGCAGACATATATACACTGTTGCATTGCATTCCTTGTGCTGCTGTACATCAATAACCTCAAGGTGCCAAAGGATTCATTGACAGTTGATCGCTGCCAAAGTCCTCGCATACAGCTCTACACCAAGCAGCTTGTGGAGGATATTTTGCAGGAGGATCGTGTCACCGATTCATCTGGAAACTATGTGTTTGGCAACCTCCCGATGAATGGTATTCTTGGTTCATGCTACAGCCACCCTGACTATGACAAGGAAAAAGAACCACGTGGGGACAATTCCGGCACTCCCTTTGCTGACGAGTTGGTTTCGACGGTAGAAATTTCTTTCCCCAGCATGTTTGACAGTGTAGGTCCCCATTTAAGTGGTCTCCAAGATGAGCACAAGCAGCGTGTACTGGATGCTCTTGGTGAATATGATCACCAGTCAAAGTTAAGTGCAGATGCTATTACCAAACAAATTAGGCTGGTTCAGACATGCCATGCGCGTGTCAGCGACCATATCATCAGCATCATCAGGGGTGAAAGCCGCACTCAGCCACCACCGGATCCACAACCACAACCAGCCTCACATTCACAACCAGACAACCAACACGGCCCAGTTGCATCGCAAACCAGTGAGGAAGCACAAGACCACCACACTCACAGCACCCCGGACATTTCGCCTACCAACTCCCCAGCACTTCAGCCTTCCAGGATCATAACACCAGATGCTGCGTTGAATGCGACACCACAGATCACATCCACTGAACCACACCCTCATTTACCAGGGGAGCTGTTTCCGACCATGGACAAGACTGCCACTGGAGATGAAACTCAAGCCCACACTCCTCAGCCAGATGCGGATTTTCAACGTGGCGGCGATGTTGGTATTCCACTGCAAGGAATTATTGCTATTACCATGACTTCCGAGGGCACATACACAACCCAATCCCATACTGCAGATGGTATTGAAGGGCACCACGATCTGCCAGATGCGGATGTTGAACATGGCATTGAGAACGACATCTCCATGCAAGGAAATACTGCAATTGACGTGACTACCGAGGGCACAAACACAACCAAATCGCACTCTGGATATCAAATTGATGGGCACCACCATCATCCAGATGCGGATGTTGAACACAGCAGCAATATTGATATCCCCACGCAAGGTATTATTCAGCCCACTGCTCCCGCCGTTGAACTTGCACTACCAGACTTCGGTGTTCCTAATACCCTTCTAGCACTGACGGCATATGTACAAGACGAAACCGCTGAACATAACACGCAAGATGAATTATTGACTGACTCCCAGCCAGCGGCGAAAATTGATCAGATTTGCATTATGGAAGGTGCCTATCATGACAGTACTGAGGTCAACAAAGAGGCTGACGACGGGGCTAGACAACATGCTAGCCCCGTGAAACGTTGTGTCAAGAGGGCAGCGAGTGCTAAAGCCACGGACATAGCCGCATCATTCAAGGCGGGAAGCATGACAGAAGGGATTTTCATAGATGCTTTTGCATCTTTGCTTTTTAAGGATGAAATGAGAGATAATCCAGAAACATTTGGCAAGAAGATCTTCATACCCACCTCTGTAACGGGTCTCCTCAACATTGAGAATGTTACTAGAGTTGGCAGTAAGGACAACTTCAGCCCACGCGGACTTGCCGAACACCTGTCTGAATGTCTGAAGGGTGTCAACCTTTCAAAGGCCGAGCAGCTTTTACTGCCAATCATCAACAATGACCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MSDALADLAIELDLPAKSDLMVIINKMLLPSTGLYIRPKDAWIGSDLQKVARINWSKAVFDALRDNVILRHKNKTGPRQQTYIHCCIAFLVLLYINNLKVPKDSLTVDRCQSPRIQLYTKQLVEDILQEDRVTDSSGNYVFGNLPMNGILGSCYSHPDYDKEKEPRGDNSGTPFADELVSTVEISFPSMFDSVGPHLSGLQDEHKQRVLDALGEYDHQSKLSADAITKQIRLVQTCHARVSDHIISIIRGESRTQPPPDPQPQPASHSQPDNQHGPVASQTSEEAQDHHTHSTPDISPTNSPALQPSRIITPDAALNATPQITSTEPHPHLPGELFPTMDKTATGDETQAHTPQPDADFQRGGDVGIPLQGIIAITMTSEGTYTTQSHTADGIEGHHDLPDADVEHGIENDISMQGNTAIDVTTEGTNTTKSHSGYQIDGHHHHPDADVEHSSNIDIPTQGIIQPTAPAVELALPDFGVPNTLLALTAYVQDETAEHNTQDELLTDSQPAAKIDQICIMEGAYHDSTEVNKEADDGARQHASPVKRCVKRAASAKATDIAASFKAGSMTEGIFIDAFASLLFKDEMRDNPETFGKKIFIPTSVTGLLNIENVTRVGSKDNFSPRGLAEHLSECLKGVNLSKAEQLLLPIINNDQ</aaseq>

Gene Sequence

<dnaseqindica>1..273#357..518#618..1293#1645..1779#2315..2449#3122..3241#3404..3486#3582..3655#3884..4037#4121..4240#4326..4358#ATGTCAGATGCACTAGCAGACCTGGCTATTGAGCTTGATCTCCCTGCCAAATCTGACCTAATGGTCATCATTAACAAGATGTTACTACCATCCACTGGTCTGTATATCAGGCCCAAGGACGCATGGATTGGATCTGATCTTCAAAAGGTAGCAAGGATCAATTGGTCGAAGGCTGTTTTTGATGCCCTCCGCGACAACGTTATTCTACGGCACAAGAACAAAACTGGCCCAAGGCAGCAGACATATATACACTGTTGCATTGCATTCCTTGTGGTAAGCATCCCTTATTTACCCAACTATTCCATTTCCAATGCAGCTTTAATTTTCTAATGTTATTGTCACCCTTCTCTATACAGCTGCTGTACATCAATAACCTCAAGGTGCCAAAGGATTCATTGACAGTTGATCGCTGCCAAAGTCCTCGCATACAGCTCTACACCAAGCAGCTTGTGGAGGATATTTTGCAGGAGGATCGTGTCACCGATTCATCTGGAAACTATGTGTTTGGCAACCTCCCGGTGAGCCCTATGTCAATATTGCATTATATTTATCTGTTTGCAATATAGGGAAGAGCCTGTCATCTATCTGAACTGAAATGCACTGCTTTTTTATTGCAGATGAATGGTATTCTTGGTTCATGCTACAGCCACCCTGACTATGACAAGGAAAAAGAACCACGTGGGGACAATTCCGGCACTCCCTTTGCTGACGAGTTGGTTTCGACGGTAGAAATTTCTTTCCCCAGCATGTTTGACAGTGTAGGTCCCCATTTAAGTGGTCTCCAAGATGAGCACAAGCAGCGTGTACTGGATGCTCTTGGTGAATATGATCACCAGTCAAAGTTAAGTGCAGATGCTATTACCAAACAAATTAGGCTGGTTCAGACATGCCATGCGCGTGTCAGCGACCATATCATCAGCATCATCAGGGGTGAAAGCCGCACTCAGCCACCACCGGATCCACAACCACAACCAGCCTCACATTCACAACCAGACAACCAACACGGCCCAGTTGCATCGCAAACCAGTGAGGAAGCACAAGACCACCACACTCACAGCACCCCGGACATTTCGCCTACCAACTCCCCAGCACTTCAGCCTTCCAGGATCATAACACCAGATGCTGCGTTGAATGCGACACCACAGATCACATCCACTGAACCACACCCTCATTTACCAGGGGAGCTGTTTCCGACCATGGACAAGACTGCCACTGGAGATGAAACTCAAGCCCACACTCCTCAGCCAGATGCGGATTTTCAACGTGGCGGCGATGTTGGTATTCCACTGCAAGGTACTAATTTTAATACCCCTTCTTTACACACACAACGAGCTGTGCACAAACTCACTGTATTTATTTTTCGGTCCTACTCTTACCTGTTATAGTTTTATTTGTGTAAACATTGGTCAGCATCCTCAATCATTCGCAAGGTGTAATGCCTTCGTCCGCTGTTATGCAATGTTCTTCTAGTAATTCATTTGGTGGCCCCTCAATTATTATTCTTTATACAACATTTACCTTCAGTACAAAACATTATTGCCACACACTTTAATATTTCTGTAACAACAATATCTGTTGCCAATAGGAAGACCTGTGCTAATAACAATGATTACAACTGACATCTACATTTATCCATTGCCCTAGGAATTATTGCTATTACCATGACTTCCGAGGGCACATACACAACCCAATCCCATACTGCAGATGGTATTGAAGGGCACCACGATCTGCCAGATGCGGATGTTGAACATGGCATTGAGAACGACATCTCCATGCAAGGTTGTCTGCGTTTCCAGTTTTTCTTTCCCACTGCATAACTTTCGCAACCATGTGCCATTATACTCATTTTTTTTTTGCAAAGTATAGTCATAATCATATCCAGCGTTGCTATATTTCTGTTTTCTATGCATACCTCCCATCTAATTAGCAATTATCTTACTAACTGATACACCTGTGATGTGAGCAATGCAATTACTACCATAGATTCTTTTGCCAAACTACAAAATTGCCTCATAGTAATACCCTTACTACCTGCACAATACTCACACTGAACCTCTATAGCCCTACCTGCAGTACCATCCAATTTTAGCAACCCATTTACTACAAGCTCATTACATTTATCTTGTATATCAGTTTCCCGTATATATGAACATTAATCAAAGTCCTTACTAATAATTTCATCAATGTACTTAGCTTTGTCTACTTAGTAAAATTTCCTTCAAATGTATTAGTGACACCTTTACCCCTACTCTATCGCTGCAACCATGTGCAATAACGTTTACCAATAGGATTACTTACTTGTGCCATACCACAGGAAATACTGCAATTGACGTGACTACCGAGGGCACAAACACAACCAAATCGCACTCTGGATATCAAATTGATGGGCACCACCATCATCCAGATGCGGATGTTGAACACAGCAGCAATATTGATATCCCCACGCAAGGTTTTCTGCTCATCCAGTTCATTTGCTTTACACTATGGTTTTCATAGCGGCTTTTATCTCACTAGCTTTATTTCTTACTTCCTAATTTTTGTGATAATGTGTCATTGTTCTCATTTTTTGCAAAATTAAACTTCTTATATTCAGTGATGTCATAGTTCTGCTTTGTATTCAAAGTAATTCAATTACTACCACTTGTTCTATTTGCCATTCAACAAACTGGCCACATAGTAAGACACTCACTACCATCACAATACACACACCGGACCCTTACCTTGCTGCAATACCATGCTTTGCCAGTAACCCAGTTACTGTCACCTCATTACCAATATTTTGCTTACCATTTACTTCCAGTAATTTGCATCACTGATACTCTTAAGTAATAATTTTACTAAGGATTCTCTTTTCCAACCGGCTTACCAATGTACTTAACTCTGTTTCATTATTTTCTACTACACTCTTATGTATCAGTAATAGTTCGACCCCTATCTCGCTGCACCCAAGTGCAGCAAATACTAGTAATAGGTTACTGGTTTGCATTCACAATATGATTACCCCTTTAAATATACAATCTGTCACAGTGCAGCTTACTGTTGGTCCGGGAGCTAGTGTTTGCTTACAGACTGATCATTTCGCAAGCACACTTGGTCTTTACTATATGATTTACTGTTGCAGGTATTATTCAGCCCACTGCTCCCGCCGTTGAACTTGCACTACCAGACTTCGGTGTTCCTAATACCCTTCTAGCACTGACGGCATATGTACAAGACGAAACCGCTGAACATAACACGCAAGGTTAGTGACCCCATCTCCTTAATCACATACAACCAGCACATCTATTAATATGGTCATCATTCCATTAGTTCAAATGTCTAATCATGGCTCTCTTCCAAGCAACATGAACAAGTGATTCTTCTCATGACGATGATCACAACTTGTCACACTCACTGCCCCCAGATGAATTATTGACTGACTCCCAGCCAGCGGCGAAAATTGATCAGATTTGCATTATGGAAGGTGCCTATCATGACAGTACTGAGGTTACCACCTGCTTCTCCTGTCCCATCTTTCACTTGTACACGGCATTAATTATCCCATCAGACCACCGAGCCCTAGCTATGTGTATCATATGCAGGTCAACAAAGAGGCTGACGACGGGGCTAGACAACATGCTAGCCCCGTGAAACGTTGTGTCAAGAGGGCAGCGAGGTACGTGCCCCCAGCTAGCCAATCCGTACCCAAAGATGACAACGTCGCCGTACAGCTCCTTGACTTGATACTGTGAGACCCAACTCAATTTTGGAGGTTTGTTCCATTTTTACCCATTTCATGTACACTGCAACTCCATAACTGCTTTATTTCAATCCTACCGCACTTACTAACCCAATCAAACATCTTACCTCACAACCCTCCCTTAATCGAGGTGGATTGTTACAGTGCTAAAGCCACGGACATAGCCGCATCATTCAAGGCGGGAAGCATGACAGAAGGGATTTTCATAGATGCTTTTGCATCTTTGCTTTTTAAGGATGAAATGAGAGATAATCCAGAAACATTTGGCAAGAAGATCTTCATACCCACCTCTGTAACGGTACTGCATGATTTGTTTTTAGCGTTTTCTGTCCATTATTTCACATTCCTTCCAACAAGCTTCTCATTAACATACAACTGCAGGGTCTCCTCAACATTGAGAATGTTACTAGAGTTGGCAGTAAGGACAACTTCAGCCCACGCGGACTTGCCGAACACCTGTCTGAATGTCTGAAGGGTGTCAACCTTTCAAAGGCCGAGCAGGTCAGGATTCAGTACACCAATTGTTAATATATATACTGCCATGCTTTATATATTATCTAATTTTACTTCTGTTTCATCTGTTCAGCTTTTACTGCCAATCATCAACAATGACCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021269

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA021269&oldid=43794"