BGIOSGA021337

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Revision as of 13:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021337| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021337, complete gene.| tag = P0578B1...")
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Gene Name

BGIOSGA021337

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021337, complete gene.

LocusTag

P0578B12.6

Ensembl Transcript ID

BGIOSGA021337-TA

Ensembl Protein ID

BGIOSGA021337-PA

Length

5270

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:13203026..13208295

Sequence Coding Region

13208140..13208295,13207918..13208027,13206650..13206706,13206267..13206566,13204558..13204805
,13204163..13204469,13203804..13204077,13203026..13203280

Genome Context

<gbrowseImage1> name=IndicaChromosome06:13203026..13208295 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:13203026..13208295 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCGCCGCCGCAGAGGCACCGGCCCCGTCGCCCTCGCCCACCGCCGCCGCGAACAGCCGGCCGCGGCGGGTGCTGGAGGAGCTCTCCTGGGACGACTCCTTCGTCCGCGAGCTCCCCGGCGACCCCCGATCCGACGCCATCCCCCGCGAGGTGCTTCACGCTTGTTACACCAAGGTGTCACCCTCGGCGCCCGTGGACAACCCTAAGCTGGTGGCGTGGTCCCAGTCCGTGGCTGACATCCTCGATCTGGATCACAAAGAGTTTGAAAGACCTGATTTTCCTCAGCTGTTCTCAGGAGCAAATCCTTTGGTTGGGAGTTCACCTTATGCCCAGTGCTATGGTGGACACCAGTTTGGTTCATGGGCTGGTCAGTTGGGCGACGGACGAGCAATAACTCTTGGAGAGGTTATCAACTCTCGAGGTGAGAGATGGGAGTTGCAGCTCAAGGGCTGTGGAAAGACTCCATACAGCCGATTTGCAGATGGCCTTGCTGTCCTCCGCAGCAGCATTCGTGAATTCCTATGCAGTGAAGCTATGCATGGCCTAGGCATCCCTACAACTCGTGCTCTTTGTCTAGTTGAAACTGGCAAATCTGTTGTTCGAGATTTGTTCTATGATGGCAATTCAAAGGAGGAACCAGGTGCCATTGTATGCCGTGTAGCACCATCCTTTTTGCGTTTTGGTTCATATCAGATACATGCTACAAGGGACAAAGAGGACCTTGAAATTGTTCGTCATTTGGCAGACTACACAATACGTCATCACTACGCACATCTCGAAAATATTAAAAAGAGTGAAGGTTTATCTTTTGAAGCAGCTATAGGGGACTCTCCAGCGATAGATCTTACTTCGAACAAATATGCAGCCTGGGCAGTTGAGGTTGCAGAGCGCACTGCTTTCTTGATAGCAAGGTGGCAAGGTGTTGGTTTTACCCATGGTGTGCTCAACACGGATAATATGAGTGTATTAGGACTAACTATTGACTATGGACCCTTTGGCTTTTTGGATGCTTTTGATCCTAGCTATACTCCAAATACAACAGACCTCCCTGGGAAGAGATACTGTTTTGCAAATCAACCTGATGTTGGCTTGTGGAATATTGCTCAGTTTACCTCACCATTGACAGCTGCCGAACTTATCAGCAAAGATGAGGCAAATTATGTGATGGAGAGGTACGGGACAAAGTTTATGGATGAGTATCAATCCATAATGACCAGGAAACTTGGTCTACCCAAGTATAATAAGCAGCTAATAGGCAAGCTGCTTAACAACCTGGCTGTTGATAAGGTCGATTATACAAACTTTTTCCGTCTTCTTTCAAATGTCAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTGTTCCACTTAAAGCTGCACTCCTAGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTTGGGTACAAACTTACATTGAAGAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCTGCCATGAACTCTGTTAATCCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATTGACGCAGCTGAGCAAGGTGATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCAGGAATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCATACAGGCCAGGAGTGTGCATGCTGTCCTGCTCATCATGA</cdnaseq>

Protein Sequence

<aaseq>MASAAAEAPAPSPSPTAAANSRPRRVLEELSWDDSFVRELPGDPRSDAIPREVLHACYTKVSPSAPVDNPKLVAWSQSVADILDLDHKEFERPDFPQLFSGANPLVGSSPYAQCYGGHQFGSWAGQLGDGRAITLGEVINSRGERWELQLKGCGKTPYSRFADGLAVLRSSIREFLCSEAMHGLGIPTTRALCLVETGKSVVRDLFYDGNSKEEPGAIVCRVAPSFLRFGSYQIHATRDKEDLEIVRHLADYTIRHHYAHLENIKKSEGLSFEAAIGDSPAIDLTSNKYAAWAVEVAERTAFLIARWQGVGFTHGVLNTDNMSVLGLTIDYGPFGFLDAFDPSYTPNTTDLPGKRYCFANQPDVGLWNIAQFTSPLTAAELISKDEANYVMERYGTKFMDEYQSIMTRKLGLPKYNKQLIGKLLNNLAVDKVDYTNFFRLLSNVKADHNIPEKELLVPLKAALLDIGPERKEAWISWVQTYIEELVSSGVPDEERKAAMNSVNPKYVLRNYLCQTAIDAAEQGDYDEVRRLLKVMEHPYDEQPGMEKYARLPPAWAYRPGVCMLSCSS</aaseq>

Gene Sequence

<dnaseqindica>1..156#269..378#1590..1646#1730..2029#3491..3738#3827..4133#4219..4492#5016..5270#ATGGCCTCCGCCGCCGCAGAGGCACCGGCCCCGTCGCCCTCGCCCACCGCCGCCGCGAACAGCCGGCCGCGGCGGGTGCTGGAGGAGCTCTCCTGGGACGACTCCTTCGTCCGCGAGCTCCCCGGCGACCCCCGATCCGACGCCATCCCCCGCGAGGTGCGTGCGTCGCTGGGGTTTACTCCCCGTTTCGTGGCTCGTCTCGTCTAGTGCCCTTCGCTTTGCTTGCTTCTGCTTCACCCGGTGATTTTGTGCTGCTTGGGTGACGCAGGTGCTTCACGCTTGTTACACCAAGGTGTCACCCTCGGCGCCCGTGGACAACCCTAAGCTGGTGGCGTGGTCCCAGTCCGTGGCTGACATCCTCGATCTGGATCACAAAGAGTGAGCCCCCAGAATTATTCTAGTAGCTGTTATGCATTTATGCTTGCCGTCCCTAGATTATTTTGGTTTTGGGGGGTATCCCTGATGTCTGTGGATAATTCAGATGAGGGTTGGACAGGCTGCCTTTGAATTAGCATAGCTCGCTTTTTTCAGATGCAGTAAGAGATACTGTTTTATTCGAAATAATTAGCTTTCCATGATTGGCAATGCGTTGGAGCATATACCTCGATCGAAAATAGTCCGTTATGGATAGAGATGTAAATGAGAAGTGGAAATTTGAGTGTGTATAACCTGCAAAACTATTACAAAACCTATCATATCACCCTTGGTAGCACATGAGCTCGAACTGGTCCATACAGCACCTCTAACTTATGCATTCACTGTTCGAAGATTTAGTGTCATTACCTTTTGCCCACCTGGGACTCTTATCGCTAACATTTTAATTTATGCCCACAACACTGACAAGTAAGGTGAAAATTTTATTCATTTATGTTTTTGCTGATGTGCTGCAGTGTGGGTGAAAGTGGTGTTGCCTAGAGTTAATGTTACCGAAACTTTCCAATAAAAAATACACCTTGTCTTTAAGTTTTTAAAGAAAGTTAGCACAGAGAAAAGGATTACTAATCAGATGTTCAAAATTCGAACACCAGAGCGAAGTATTACATGGTACACAGACATGGCATCATGGACACTCGTGTCAGAATCCTAATTGGAGTGGTGTGTCCAATGCGGCATAAAAAGTGGGCACACATAATACAACTCAGAATCGGACTGGAGTGGTGTTGGAATACGACTTGGACCTGGGTGCCTGATTCGGCAAGAAATTATTTGCCCATGCAATATTCTTTTTCTGTGTTGCCCAACTCAAACTTCTTGTTTTTTAATTTGCCACATGATAGGCCAAGTGTGCTGTCTGGCATGTTATCAGCTTCTTCTTTTGGCTACTGACCACTGAAACTGTTTATGACAAGTTGGTTTTGCTTTTTATCCAGATTTTTGTACTGGTTGATTTGTTACAAGAATACTGTATTTCTTAAGTTGCTTTTGATCTTGATATGATCTGTTAATGAATTAAGCTGAGTAATGCATTTTTACCTCCTACCAACTCTCATTTTCTCCATTTTTGTGTAGAAGCATGTTCATTATTCTCTTCCCTGTTACTGTCATCCATTCCTTTTAATCATTTTGTATCCTTGTTGGTCTACTTTCAGGTTTGAAAGACCTGATTTTCCTCAGCTGTTCTCAGGAGCAAATCCTTTGGTTGGGAGGTGCGTAATACTAATGCTTAACATTCTCTTCATATGATTGCACAAAAAAAGCAACCCACCTTCTGATGAACAACTACCTGCAGTTCACCTTATGCCCAGTGCTATGGTGGACACCAGTTTGGTTCATGGGCTGGTCAGTTGGGCGACGGACGAGCAATAACTCTTGGAGAGGTTATCAACTCTCGAGGTGAGAGATGGGAGTTGCAGCTCAAGGGCTGTGGAAAGACTCCATACAGCCGATTTGCAGATGGCCTTGCTGTCCTCCGCAGCAGCATTCGTGAATTCCTATGCAGTGAAGCTATGCATGGCCTAGGCATCCCTACAACTCGTGCTCTTTGTCTAGTTGAAACTGGCAAATCTGTTGTTCGAGATTTGTTCTATGAGTATGTCATGACATCTCTGTTTTCTGAACTACATCATGCTCGATCTATTTTTCTTTCTAAATTTACTTTAGAAACAGATCGTTCCATATCCGAAGTTGTATATCTTATGAGATATTTCTTCCTTCTATCTAACATGGTCACAAAGATTAAAAAGAGAACAATAGATGGTATGAGTCTCTCTATAGAAAGAATGATAGATGATCAATAATATTATTATTTAAAGCTAAATATGAAGCTGCCAATAGGCAAAAATAATAATGGTAGCGTGTTTCTGAAAACGTGGTACTATTTTAAACTTTTAACTGTATGTTTATGGAGAACATATCCTATCCGCACAAGCTTCCCGTGCACATTAACAGCCAAATATCACGGAAAATTCTAGAAAAAATATGACATGTACTCTTAATAGTATTACACATATCTACAAAGTCTTATATTCAAATTCGCTATATTTTAGCTGTAACAAAAAAAAAGTGAAAAATTTGACAGTTTTAAGATTAAAAATCTGTCATAATTTTGTCTTTTCGTTACGATTAAAATATAATGATTTGAACATGAAATGTCACAGATAGGTGTAATACTATTGAAAGTATGTGTTCAATTTTTTCTAGAAATTTTTTGTGACATTTGCTAGTTGGTGTGCACGGGAAGCTTGTATGCATAGGATATGTTCCCATGTGTATGTTGCTTGAGCCACATATATATACCAGCATAAGCTGCAGTGGGCCTGCTACTGAACAAGTCTATTAGCTTCTTTGGTGATGGTTGTGCTGGGGATGTAGAAATTACCCTGAATGGCACTAATCATGTGGTGATGGCTCATTTTCGTTTTTAGCACATGTGAGTTTGAGTTTTTTTTTCCATTTCTTTAGTGCATGACTGTATGTGGAAATCATATTTGGCATATTCCAGTATCATTAGTCTACATAAGTAAATTGTCTGGTTTTCATGATATATATAATAGCACTTGTGAGCACTAAATGTTGAAATGATTACCCCTTGCCACTATGTCAACTATGATTCTTGGCTGCGATATTACGCAACCGAGTTACTGCAGCTGCTAACTGCTTTTGTCCACAAGTGTGTGTAGTTACATAACAAAGCAGCAGCGACCACTGTAATGGAGCATGTAGCAGCTGCTCTAAGATTCTTCAGGTTTCCTTGGGCCATATAACATGTCCTTCTTTTAAGAAAGTGCATAATTTTGCCCCCCCCCCCCCCAAATTTTTTTTATTTTTATTAACTTTGTATTGAATACTATCATACAAACTCCATTGTCCCTTTCATTTACCTACTGTTGATTAACATTACCTTAGCGGCTTTTTCATAAAGAACACTGGTTGCCAGGACCTTTCCCCTTTTTTTTTCCAGAACCTTCCTTTTGAAGGTTTTAGTAATTATGTTGTATCTATTAGCATTTGTTTATGATGATAAATCTAATGGTTTGTCTTTATATATCAGTGGCAATTCAAAGGAGGAACCAGGTGCCATTGTATGCCGTGTAGCACCATCCTTTTTGCGTTTTGGTTCATATCAGATACATGCTACAAGGGACAAAGAGGACCTTGAAATTGTTCGTCATTTGGCAGACTACACAATACGTCATCACTACGCACATCTCGAAAATATTAAAAAGAGTGAAGGTTTATCTTTTGAAGCAGCTATAGGGGACTCTCCAGCGATAGATCTTACTTCGAACAAATATGCAGGTAAATATCATTATGTGCTATTTTCTTTCAGTCTACTCATTGATATTTAAAAGGCTAAGTATTCTCCCCTTTTAATCCTTGGTTACAGCCTGGGCAGTTGAGGTTGCAGAGCGCACTGCTTTCTTGATAGCAAGGTGGCAAGGTGTTGGTTTTACCCATGGTGTGCTCAACACGGATAATATGAGTGTATTAGGACTAACTATTGACTATGGACCCTTTGGCTTTTTGGATGCTTTTGATCCTAGCTATACTCCAAATACAACAGACCTCCCTGGGAAGAGATACTGTTTTGCAAATCAACCTGATGTTGGCTTGTGGAATATTGCTCAGTTTACCTCACCATTGACAGCTGCCGAACTTATCAGCAAAGATGAGGCAAATTATGTGATGGAGAGGTGCATTGTTTTGTCCAATATTTACTGATTATTACCCATGTTTATGTCCAGATGTATCATACATTTTGATTTCTGTGTACTGCAGGTACGGGACAAAGTTTATGGATGAGTATCAATCCATAATGACCAGGAAACTTGGTCTACCCAAGTATAATAAGCAGCTAATAGGCAAGCTGCTTAACAACCTGGCTGTTGATAAGGTCGATTATACAAACTTTTTCCGTCTTCTTTCAAATGTCAAAGCAGACCATAACATTCCAGAGAAGGAGCTACTTGTTCCACTTAAAGCTGCACTCCTAGATATTGGACCAGAAAGAAAGGAAGCATGGATTAGTTGGGTACAAACTTACATTGAAGAGGTAGGCTTTACTTTTGGTAATCGTTTATTCAGTTTGTTTCTCTAATTATATTTTATAAGTGCACTTTCAAACCCAACATAATGGTATAGCACATCAATATATTATCAATGATTTTTGTCTTGCTTGTTGGTGTTTGGGTATGTGTTTGTCAACCCCTGTCATTTTGTGAAGTTGGAATAGTCATGTGTACAAAAGAATGTCACAAGGCAGAAATGAGTGGTTGTTTGCTCCCGTTATATGCTTCCAAATATTTACAATCATTTACATATTGGATTATATTGTTTTGAAAATTTTATCAACTGTTGGTTTTGGATAATATCTCATTCATTGTTAATGTATCATCAGCATGCTAATCAATTCCCTGAATTATTGACTTATTCTGCCAATAGCCAATATGTTGGTAGATCCTCTTTGCTTCATTAGTTCAAACATTTATAGCGAACTACAGCTTTGAGAAATGACAAGTTGTAAAGAGGCTATTTGGACATCCTTGATCTAATGATATATTTTTTTCTTTGTGAAGTTGGTTTCAAGTGGCGTTCCTGACGAAGAAAGGAAAGCTGCCATGAACTCTGTTAATCCAAAGTATGTTCTTCGGAACTATCTCTGCCAGACTGCAATTGACGCAGCTGAGCAAGGTGATTATGATGAAGTTCGTCGGTTATTGAAAGTTATGGAACATCCATATGATGAGCAGCCAGGAATGGAGAAATATGCCCGGTTGCCACCAGCCTGGGCATACAGGCCAGGAGTGTGCATGCTGTCCTGCTCATCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021337