BGIOSGA021525

From RiceWiki
Revision as of 13:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021525| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021525, complete gene.| tag = OsI_223...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021525

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021525, complete gene.

LocusTag

OsI_22396

Ensembl Transcript ID

BGIOSGA021525-TA

Ensembl Protein ID

BGIOSGA021525-PA

Length

3714

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8951322..8955035

Sequence Coding Region

8954491..8955035,8954047..8954425),complement(8953013..8953085,8952184..8952475),complement(8951322..8951469

Genome Context

<gbrowseImage1> name=IndicaChromosome06:8951322..8955035 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:8951322..8955035 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAGGCGCGCGGGGTGGCGACCCGCGGCGGCGCGTCCGCGGGCGGCAGCAGGAGGGCCGTCGTGGTCGGCGAAGGTGACGAGCGCGTGCTCGTCCCAGAGGCCCCTCCAGCGCCGGGAGATGAGGCTGGTCCGGGCGGCGGCGGCGGCGGTGGAGAGGCGGAGGAGGATGAGGAGGAGGACGTCGTCGGGGAGCGAGCTGAGGCGGTCCTCCCCTCCGCCGCCGATCACCGCGTCGTCGTCGTCGTCACTGGAGGTGGAGGAGAGCTTCACGCGCTTGGTGGGGGAGACCTCGCCGTCGCTAGCCTTCGCGCGCGCGGTCCCCGCGGCGGCCACGTCGCCGTCGACGTCGACGTGGTCCATGGCGGAGGGCGGAGGCGAGCGCCGTGGCGTCGCCGCGTCTCCGAGAGAGAAGAATGCAGCGAAACGAGAAGACAAGACGGCAGACGAGCGGGCGACATCCACCGTTCGATCTAGATCTAACGGTAGAGATTCGAGAAGGAAAATAACAGAAAAAGATTCGCGATCCCAGCTGTCATCGAGCTTTCAGGGCCCTCGCCGCCGGCCGCCGATGCTCGCCGCCGCGGCGAGCAGCGGCGGTGAAGATGGCCGCCACCACCGGTCCGTGTACTTGCGCGTGCGGTGCGCATGCTTCGCCATGACCTCCGTGCCGCCGCTACCTTCCTCCAAAACGACCGCGAACCCCAACCCGCCTGCCACCATCGCGTTCCATGCCTACGCCACGCACAGAGCGCGCCTCTCCCGCTTGCTCCTCGACGGTTGCCATGATCGTCCCAAGATGACCTACTCGCGCGGTCTCGGACGACTCCCTGCATCGACCCTGCGCGGCTGCGCTTTTGGGCATGGGGGAGCCATAGCTGCGCTCATGCTGTTCGACGAAATGCCAGACCGCGCCTCCGCCTTACCTTTGCAACTTGATATCAACAACCACCAGTCACCCTGTGTTCTACTTAGCAAGTCCATGTGGAAGACTGGTGTTATAGTAGCTGTCTTTTATTGCTTCCTGAAGCAACTGGCAGAATTTTCTGATACAGACCAGCAAACAGTTCGGGGTCAAGATGCAAGGAACAATGAAACAGAACCAATTCTGCCAAGAAAAAGGGTGGTTTTCAGCTATGGAGCGACGGAAGAGCAGCCTGAGTCGAGCATGTGCTCTTCAGAAGATACGTGCAGTGATAATGTCTGCAAGATCTGCTATGATGCTCCACGGAGTTGCTTCTTCATACCCTGTGGCCATGGTTTTGCATGTTTTACGTGTGCAAGGAGTCTAGCCATACGTTTGGCTGGACCAAAGCTCGTGGTTGCGGGCTTGCGGCCAGAATTATTATTCTTCCAAGGTCTCACTCTCCGTGGCGGCCAAGTTTCCCTCCCATGTGTTGACCATCATGGGAACCAACTTGTTGTGTCCACGTAG</cdnaseq>

Protein Sequence

<aaseq>MGRRAGWRPAAARPRAAAGGPSWSAKVTSACSSQRPLQRREMRLVRAAAAAVERRRRMRRRTSSGSELRRSSPPPPITASSSSSLEVEESFTRLVGETSPSLAFARAVPAAATSPSTSTWSMAEGGGERRGVAASPREKNAAKREDKTADERATSTVRSRSNGRDSRRKITEKDSRSQLSSSFQGPRRRPPMLAAAASSGGEDGRHHRSVYLRVRCACFAMTSVPPLPSSKTTANPNPPATIAFHAYATHRARLSRLLLDGCHDRPKMTYSRGLGRLPASTLRGCAFGHGGAIAALMLFDEMPDRASALPLQLDINNHQSPCVLLSKSMWKTGVIVAVFYCFLKQLAEFSDTDQQTVRGQDARNNETEPILPRKRVVFSYGATEEQPESSMCSSEDTCSDNVCKICYDAPRSCFFIPCGHGFACFTCARSLAIRLAGPKLVVAGLRPELLFFQGLTLRGGQVSLPCVDHHGNQLVVST</aaseq>

Gene Sequence

<dnaseqindica>1..545#611..989#1951..2023#2561..2852#3567..3714#ATGGGGAGGCGCGCGGGGTGGCGACCCGCGGCGGCGCGTCCGCGGGCGGCAGCAGGAGGGCCGTCGTGGTCGGCGAAGGTGACGAGCGCGTGCTCGTCCCAGAGGCCCCTCCAGCGCCGGGAGATGAGGCTGGTCCGGGCGGCGGCGGCGGCGGTGGAGAGGCGGAGGAGGATGAGGAGGAGGACGTCGTCGGGGAGCGAGCTGAGGCGGTCCTCCCCTCCGCCGCCGATCACCGCGTCGTCGTCGTCGTCACTGGAGGTGGAGGAGAGCTTCACGCGCTTGGTGGGGGAGACCTCGCCGTCGCTAGCCTTCGCGCGCGCGGTCCCCGCGGCGGCCACGTCGCCGTCGACGTCGACGTGGTCCATGGCGGAGGGCGGAGGCGAGCGCCGTGGCGTCGCCGCGTCTCCGAGAGAGAAGAATGCAGCGAAACGAGAAGACAAGACGGCAGACGAGCGGGCGACATCCACCGTTCGATCTAGATCTAACGGTAGAGATTCGAGAAGGAAAATAACAGAAAAAGATTCGCGATCCCAGCTGTCATCGAGGTTGGGTTTTTGCAGAGAGCACCCTGTGATATGTGATCATTTTGCAAATTGCACCTGCGAAACAGCTTTCAGGGCCCTCGCCGCCGGCCGCCGATGCTCGCCGCCGCGGCGAGCAGCGGCGGTGAAGATGGCCGCCACCACCGGTCCGTGTACTTGCGCGTGCGGTGCGCATGCTTCGCCATGACCTCCGTGCCGCCGCTACCTTCCTCCAAAACGACCGCGAACCCCAACCCGCCTGCCACCATCGCGTTCCATGCCTACGCCACGCACAGAGCGCGCCTCTCCCGCTTGCTCCTCGACGGTTGCCATGATCGTCCCAAGATGACCTACTCGCGCGGTCTCGGACGACTCCCTGCATCGACCCTGCGCGGCTGCGCTTTTGGGCATGGGGGAGCCATAGCTGCGCTCATGCTGTTCGACGAAATGCCAGACCGCGCCTCCGCCGTGCGTCACGTTAGAGGCGACGCCTATTTGCTCACAAAAGAAGGGATCGACCACTGGAAGACGAACTCAGCTTGTTCGATGGAGTGGCCTGGAGGAGTCCATCTGCTGGCATGGAATGCCATCATGAGGATGCAGTCGCAGGCTTAGGAGTCCATCTGCTGGCATGGAATGAACTCAGTTTGTTCGATTGCAGTCACAGCCATCATGAGAATGCATTGCATTCAAGCACAATGAGGTGGCCGTCGTGTTGACTGCAAGTGTGCCTGGCTGCCTACCACCTTGGAGGATGCAGTCACAGTCTTAGGTCCTCTCCCTGACCAACATCACCTTCCCTTGGTTGTTCAATGCGTACATCTGCCATTCTGGGTTATTTGGTGAGTGCACCAAATTGTTCCTGTGTTGAGCTACTAGTCCTTTCATTACCGCACATCCCGGCGTGCTGGTTACAATGCTGTGCTATGAGTAATTTTGGTTGTTTCTGACCCTTCTGCTTTCTTTGTCATCTTTTTCGGTCTCCTGCATTTTGCTCAAGACGATTATTTGGAGTATTGGGGCCAATATGCCATGTTACCGATAATTGTTTTGTTCATTTTTGTCAGTTACGGATTAGTGAGCATCACAGCTGATTTGTAGGTTCCAAACTTCTTAGTTTTGGATCATTTTCTTCACAGAGCTTACTCCTTTATTTAGCATCGAATCCTACGTTTGAGTCTCATCTTGTAGTCAGTTCTTAGTGCCTCTTTGGCTCTGAACTTGCAGTGCTTTGCATTGTTGTGAGTTTGTGAACCTGGTGGTTTTTGTTTTCAGATTCTTCCTCTTTGCTATAGCTCCTTGTATCTAAGCCAAATTCACGAAATGTTGGACAGCTTCTGAATTTTCCTTGTGGCCTTTGTTCTTGGTAGTTGAAAACTCATCACGGTGTAACACATGCCCTTCTCACAATGATCTGTAAGAATGGTAGTTACCTTTGCAACTTGATATCAACAACCACCAGTCACCCTGTGTTCTACTTAGCAAGTCCATGTGGAAGACTGGTAAGTAAATGATAACCAAAACATTCACTAATTCCTCAATTCCATAGTATAGCTCTTCTCCAGCCTGAACTTACCTCGTACTCAGAAGTATTTGCCGAACGTCTTCTCCTCCAGTTCTCCATGCTGCATTCTTCTGCTAGACTGTTGTCTTCTCCTCCAGTTTTGTGTGCTGCACGCTGCTAGCTTTTACCATCTATGCCGCTGTAAATTGCATTCCTGATATCGCCAGGTAGAGTGCCTTGTACTAGTTTGCAGCAATTTTGTTTGAGCTTTGACATTAGAAGGTAAACTGTAGCAGCAGATTTCCACCTTCTTTTTTTCCCTCTAGAAAACTGGTTCTAAGTGGTTTGAAATTTATGTTTCAGGTGCTAATGAAGCTTTTGTTGGTTGATTCCTTTTCTTCCCAGTTGGCCTCATACTTTGTCATAATATGTGCGACATAGCTTCATGATTGCTTTTCAATTTGCTCATTCCTTGATTAGATCTTTTCACTTCACTTTTTAAATACTAATTCTGCCTCCATTGGTTGAACTGTAGGTGTTATAGTAGCTGTCTTTTATTGCTTCCTGAAGCAACTGGCAGAATTTTCTGATACAGACCAGCAAACAGTTCGGGGTCAAGATGCAAGGAACAATGAAACAGAACCAATTCTGCCAAGAAAAAGGGTGGTTTTCAGCTATGGAGCGACGGAAGAGCAGCCTGAGTCGAGCATGTGCTCTTCAGAAGATACGTGCAGTGATAATGTCTGCAAGATCTGCTATGATGCTCCACGGAGTTGCTTCTTCATACCCTGTGGCCATGGTTTTGCATGTTTTACGTGTGCAAGGAGGTATAACTCTCATCTAGATCCTTCAGTTACAGGAGTCAGTTTACTGCTGTATGGCTTTAATTTGATTGCTTTTTCTTTTTACGAATCTGATTAACTTGTAGAATAAAAGGGATCTGATCCCTGTAAAGTCACAACTCACAAGTTAGCCTCGGTCTGAACTGTTATGATTTCTCTCTCAGTAAAGCTGGGAGCCAAAGATTTGTTGTCCCGTAATTATTTGATGAGGTTCACTGAATAACAGCACATTGCCTACTGTTACTGCAGGATCGCGGAAGACAAAAATCAGGCATGCCCAATTTGCCGAAGGCTGATCCACAGAGTAAGGAGGCTGGTGGAGCCCTTAGGTTCGTCTTGTGGTGAGTAGATGATCTTGAGTCACCAGAGAGCAGAGTTGCAATGCTGCACTGATGATGCATTTGTTGCCTTGCCGCCCGTATGCTGCCTTGTCTAGGCCTGAAGGATGCTTTGGACTAAGCATGGAAATGTCGATCACCTACCTGACGGATTGACCGGATGAGGAAGCTAGTATTGAAGATGGACTCAATTAATTTACGCCGGCTATTGAATCTTTTTGTTTCCTTTTTCTTGTGTATGTTTAGGTAAAGACTTTCAGTAGTTCGTACTGCTTTCTTTCTCTGATCCACTGTACGTTTCACACACTCTTGGAGACTGATGCATGATAATAGTAGTTCGTATCGCATTCATGCCGTGCAGTCTAGCCATACGTTTGGCTGGACCAAAGCTCGTGGTTGCGGGCTTGCGGCCAGAATTATTATTCTTCCAAGGTCTCACTCTCCGTGGCGGCCAAGTTTCCCTCCCATGTGTTGACCATCATGGGAACCAACTTGTTGTGTCCACGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021525