BGIOSGA021536

From RiceWiki
Revision as of 13:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021536| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021536, complete gene.| tag = OsJ_208...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021536

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021536, complete gene.

LocusTag

OsJ_20819

Ensembl Transcript ID

BGIOSGA021536-TA

Ensembl Protein ID

BGIOSGA021536-PA

Length

2942

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8770331..8773272

Sequence Coding Region

8772887..8773272,8772100..8772553),complement(8771455..8771769,8770977..8771405),complement(8770331..8770825

Genome Context

<gbrowseImage1> name=IndicaChromosome06:8770331..8773272 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:8770331..8773272 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATTTTGACCTTAACAGTATCCCGGAATTAGTTTCAGGTGAAAATGAACCTCCAGTACACCATTTACTAGTTGATGATGAAGACAAAAGTGAAACATACTTCCCTATAAATCCAACTGACACTAGAATGGAGATTCCTACTATAAATTTGGACGACACTTTTGACTATGAAAATATGTATACTGCTGGTGATGCTGGAAGTTTACAAGCACACAATGTAGCCAATGATGAGATGCAAGTATTTGAAGAAATGTCAGATCATGCAGACACAATGCATACTAGTGTTGCAACTGGCGCAACAACTGCTACTGCCAACACAATTTCAAGTGAAGACTCTGGAACAGATGACTCAGAAGCACAGTCAACGCCATCACAGGATATTCCAAAGTTTTCACTCAAGAAATTCCTAAGGTCACATAGAGCAATACCGAAAGAGGAAAAAGATTTCATCACAATGCTGCACGGAGTTAATCTCTCAGCGAGTAGAATTATGCAATTGATGTCTGAATTGTATGGAGGGGCTAGGAATGTACCCTACACTAGAAAAGACATAAGCAATTTCAAGTCAAAGTTGGGGAGCGAGTATAGGTGTAGAGATATTCCTGAAACAATTGCTCACTTTGAGGAAATCAAAAAGGATGACCCGAATTTCTTCTACAAGATTCAACTTGATAAGGAAGACAGGGTGCAGAACATATTTTGGGTTGATGGAGCAGCAAGAAATGCCTACAAAGACTTCAAAGATTGCATCTCGTTTGACTGCACATACATGACGAACATGTATAACATGCCTTGTGCACCATTTATTGGGATAAACAGACATGGGCAATCAATACAGCTGGGTTGTGGATTTCTAAGGAATGAAAAGACAGAAACCTTTGTATGGTTGTTTCAAGAATTTCTAGAGGCTATGGAAGGTGTAGAGCCCATAAACATAATAACTGATCAAGACCTAGCTATGAAGGCAGCTATAGCACTAGTTTTCCCACATGCTAAGCATCGCAACTGCCGCTGGCATATAATGCAGAATGCTCAGAAGAAGATTGGCCATATATTAGATCATGACAAAGCATTGTGTGATGCATTCAATGACTGCCTTAACAACAGCTGGACAGAGCAAGAGTTTGATGCTAAATGGGATGCAATGTTGACAACTACAGCACGGAGTGAGGGATTTAACGCAGTGCTGAAGCGCTATGTAAATCCCCAAAACAGCATATACAACTTCTTTTTGCAGTACAAGAAGATTCAAGAAAAAATCACTGTTGCAACAGATCAGAATGAGTTTGAAGCAGAAGAAACAATCCCTTCTATGTGGGCTAACTATCCCATGAAAACAAAAGCATTGGAGGTCTACACAAGGCCTATATTCAACAGATTTCAAAAAGAGCTGATTGCTTCAACATCATATAAATTGACCCGAACTTCTGAAAACATGTATCTAGTAGAACCGAATGGAGGTCCTGTTAGGAATTATGGATCAAGGACATTCATTCTAGCTGCAAATGTGTTGGACAGGATATACAACTGTGAATGCTGTAAGTTCGAAAGGGATGGCATTCTTTGGTGTCATGTTTTGAAGGTGATGGCATCTGATTTTGTGGGCCAAGTGAGTGACATTCCAGAACACTACATATTGCCTAGATGGACGATGGTTAAAGAGCCTGAATTGCCTCCAGTTACAAGCATTGGTGAACAAATGCAATTGCCCCCTGAATCTCTGAAGCTAATCAGCTATACCAATCTGTGCACAAAATTTACACAGATTGCAAAAGATGCATCAAGCAACGAGAAAGCCTACCGTATGGCTCTACAGCGTATGAGCTCAATGACTGATGACTTAGCAGCTATGAAGCAGAGTAGAAAGAAACAGAAAAAAGCACAGCCAGCCCCAGCTGATCCTGCAAGAGGAGTTTCAGATATCCCCTCGGCATCAACTAACCCAACACTACAAATAAATGACCCCCCCATCATACAAAAGCAAGGGAGACCAGTTTCAACAAGACGCAAGCCTGGGGTCCATGCAAAGGCGTCAAAGACATCAGTTAGGAAAGGCCTAGCTAGTACTGGGAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MDFDLNSIPELVSGENEPPVHHLLVDDEDKSETYFPINPTDTRMEIPTINLDDTFDYENMYTAGDAGSLQAHNVANDEMQVFEEMSDHADTMHTSVATGATTATANTISSEDSGTDDSEAQSTPSQDIPKFSLKKFLRSHRAIPKEEKDFITMLHGVNLSASRIMQLMSELYGGARNVPYTRKDISNFKSKLGSEYRCRDIPETIAHFEEIKKDDPNFFYKIQLDKEDRVQNIFWVDGAARNAYKDFKDCISFDCTYMTNMYNMPCAPFIGINRHGQSIQLGCGFLRNEKTETFVWLFQEFLEAMEGVEPINIITDQDLAMKAAIALVFPHAKHRNCRWHIMQNAQKKIGHILDHDKALCDAFNDCLNNSWTEQEFDAKWDAMLTTTARSEGFNAVLKRYVNPQNSIYNFFLQYKKIQEKITVATDQNEFEAEETIPSMWANYPMKTKALEVYTRPIFNRFQKELIASTSYKLTRTSENMYLVEPNGGPVRNYGSRTFILAANVLDRIYNCECCKFERDGILWCHVLKVMASDFVGQVSDIPEHYILPRWTMVKEPELPPVTSIGEQMQLPPESLKLISYTNLCTKFTQIAKDASSNEKAYRMALQRMSSMTDDLAAMKQSRKKQKKAQPAPADPARGVSDIPSASTNPTLQINDPPIIQKQGRPVSTRRKPGVHAKASKTSVRKGLASTGK</aaseq>

Gene Sequence

<dnaseqindica>1..386#720..1173#1504..1818#1868..2296#2448..2942#ATGGATTTTGACCTTAACAGTATCCCGGAATTAGTTTCAGGTGAAAATGAACCTCCAGTACACCATTTACTAGTTGATGATGAAGACAAAAGTGAAACATACTTCCCTATAAATCCAACTGACACTAGAATGGAGATTCCTACTATAAATTTGGACGACACTTTTGACTATGAAAATATGTATACTGCTGGTGATGCTGGAAGTTTACAAGCACACAATGTAGCCAATGATGAGATGCAAGTATTTGAAGAAATGTCAGATCATGCAGACACAATGCATACTAGTGTTGCAACTGGCGCAACAACTGCTACTGCCAACACAATTTCAAGTGAAGACTCTGGAACAGATGACTCAGAAGCACAGTCAACGCCATCACAGGATATTCCGTGCGCACACAAGTGCCGTACCTCACCTTGACTTTCAACTCAGAGGAGGAAGCAAGGGCTCACTACAACAGGTACGCAAAGCGCGTTGGATTTTCAATCAAAATCAACACTTCAAGAAAGTCAGCCAAAAATGGAGAACGTGACAAAGTAATGTTTGTTTGCAACAAATGTGGTCCAGAAGAAAAAACGGGTGAAGCGTGCCCCCCCCCCAAAGAAAAGGAAAAGAAGTAGAACAAGACAGGCTGCCTGCAAAGCAAGGATGACAATGAAGAGGAAAGGAGCTAGGTGGGAAGTAATTCAGTTTGTTGAAGAACACACACATCCTCTGGTTAGAAAGTTTTCACTCAAGAAATTCCTAAGGTCACATAGAGCAATACCGAAAGAGGAAAAAGATTTCATCACAATGCTGCACGGAGTTAATCTCTCAGCGAGTAGAATTATGCAATTGATGTCTGAATTGTATGGAGGGGCTAGGAATGTACCCTACACTAGAAAAGACATAAGCAATTTCAAGTCAAAGTTGGGGAGCGAGTATAGGTGTAGAGATATTCCTGAAACAATTGCTCACTTTGAGGAAATCAAAAAGGATGACCCGAATTTCTTCTACAAGATTCAACTTGATAAGGAAGACAGGGTGCAGAACATATTTTGGGTTGATGGAGCAGCAAGAAATGCCTACAAAGACTTCAAAGATTGCATCTCGTTTGACTGCACATACATGACGAACATGTATAACATGCCTTGTGCACCATTTATTGGGATAAACAGACATGGGCAATCAATACAGGTACTCCTTTTTTTGCAAAAAAGTAATTCTAAAAAATCTGTAATAACTTTGTACATTATAGTACACCATAAGTTACTTGTTGCATTCATTGAGTTACATCAAGTCCTGATAAAAGTTACTTCCAGTAGAATGTGAAGTTACATTTTTTTTTAAAAAAAGTAAAAAAGTAACTAAGTTTACAAGTTACATCTTTTAGTGTCTGTTCTATAGTTCAAAATTGTACTGATTTACTTCTAGCAAACACAAACTGTACAGACTACGCAAAATTGTAGTAACTTACTTGCTTCAAAACTGTACTGACTTCCTTACGTGTATTTTTTTTATATTCAGCTGGGTTGTGGATTTCTAAGGAATGAAAAGACAGAAACCTTTGTATGGTTGTTTCAAGAATTTCTAGAGGCTATGGAAGGTGTAGAGCCCATAAACATAATAACTGATCAAGACCTAGCTATGAAGGCAGCTATAGCACTAGTTTTCCCACATGCTAAGCATCGCAACTGCCGCTGGCATATAATGCAGAATGCTCAGAAGAAGATTGGCCATATATTAGATCATGACAAAGCATTGTGTGATGCATTCAATGACTGCCTTAACAACAGCTGGACAGAGCAAGAGTTTGATGCTAAATGGGATGCAATGTTGACAGTGTTGGGTCCCAGCATACTTTATGCATTGTTTCTTCCCTTTCCTCCAGACTACAGCACGGAGTGAGGGATTTAACGCAGTGCTGAAGCGCTATGTAAATCCCCAAAACAGCATATACAACTTCTTTTTGCAGTACAAGAAGATTCAAGAAAAAATCACTGTTGCAACAGATCAGAATGAGTTTGAAGCAGAAGAAACAATCCCTTCTATGTGGGCTAACTATCCCATGAAAACAAAAGCATTGGAGGTCTACACAAGGCCTATATTCAACAGATTTCAAAAAGAGCTGATTGCTTCAACATCATATAAATTGACCCGAACTTCTGAAAACATGTATCTAGTAGAACCGAATGGAGGTCCTGTTAGGAATTATGGATCAAGGACATTCATTCTAGCTGCAAATGTGTTGGACAGGATATACAACTGTGAATGCTGTAAGTTCGAAAGGGATGGCATTCTTTGGTGTCATGTTTTGAAGGTAACAGTCTGTTATTGCAGTAAGCTACTTCTCACTTTGTATTAAGCTACTTCTTACTGCACATTAAGTTACTTCTTAATGTGCATTAAATTACTTCTTATGCATTAAGCACTTTTGGCATGTGATAAAACATATGTTTTTTTCCATGCAGGTGATGGCATCTGATTTTGTGGGCCAAGTGAGTGACATTCCAGAACACTACATATTGCCTAGATGGACGATGGTTAAAGAGCCTGAATTGCCTCCAGTTACAAGCATTGGTGAACAAATGCAATTGCCCCCTGAATCTCTGAAGCTAATCAGCTATACCAATCTGTGCACAAAATTTACACAGATTGCAAAAGATGCATCAAGCAACGAGAAAGCCTACCGTATGGCTCTACAGCGTATGAGCTCAATGACTGATGACTTAGCAGCTATGAAGCAGAGTAGAAAGAAACAGAAAAAAGCACAGCCAGCCCCAGCTGATCCTGCAAGAGGAGTTTCAGATATCCCCTCGGCATCAACTAACCCAACACTACAAATAAATGACCCCCCCATCATACAAAAGCAAGGGAGACCAGTTTCAACAAGACGCAAGCCTGGGGTCCATGCAAAGGCGTCAAAGACATCAGTTAGGAAAGGCCTAGCTAGTACTGGGAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021536

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA021536&oldid=44061"