BGIOSGA021723

From RiceWiki
Revision as of 13:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021723| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021723, complete gene.| tag = OS11G06...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021723

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021723, complete gene.

LocusTag

OS11G0641200

Ensembl Transcript ID

BGIOSGA021723-TA

Ensembl Protein ID

BGIOSGA021723-PA

Length

5060

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:5789389..5794448

Sequence Coding Region

5794134..5794448,5793303..5793569),complement(5792581..5792987,5791719..5791904),complement(5791172..5791364
,5790893..5790969),complement(5790364..5790514,5789389..5789685

Genome Context

<gbrowseImage1> name=IndicaChromosome06:5789389..5794448 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:5789389..5794448 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGGGGGCCGACCTGATCAACCTCCTCCTCCCGGACGAGATCCTCGACGAGGTGCTACGCCGCGTGGCCGTGTCCGGGGCCAAGCGGGACCTCGACGCGTGCGCCCTCGTCTGCAGCCGCTGGCGCCGCCACGACCGCGCCACCCGCCGCTCCGCCAAGCTCGCCGCGTCCGGGGCCCGCGCCGACGAGGTGCTCCGCCTCGTCGCCGAGCGGTTCCCGGCGCTCGTCGAGGTGTCGGTGGACGAGCGCATCAGCGTCGAGGCCGCCGCGGCCGGGCCCTCCTGTGCCGCCGCTAGATCGCGCCGCCGCCCGATGTATGATGTTAGTCCTTCTGGGCGCCGTAGGAGGATGTCCCGCAGCTCAAATTTCGGAGCGCACATGTCCCCATTTCCATTGGACCAGCCGGGCAGTGATAATGAGACAGAGCGCACTTGCTTGACTGATGTTGGATTAACTAGTCTTGCCAGGGGTTGCAAAGGGCTCGAAAAACTAAGTCTGGTATGGTGTTCTTCCATAACTTCGACAGGCTTAGTAAGAATATCAGAGAATTGTAAGAACTTGAGTTCGTTGGATCTTCAGGCTTGCTATATTGGAGATCCAGGACTTATTGCTATTGGTGAAGGCTGCAAGTTACTTCGTAATTTGAACTTGCGTTTTGTTGAAGGCACTTCAGATGAAGGCTTGATTGGACTAATAAAGAACTGTGGACAATCACTTGTCTCTCTTGGCGTTGCCACTTGTGCTTGGATGACTGATGCATCCTTGCATGCTGTTGGATCACACTGCCCTAACCTGGAATTCCTGTCACTGGAATCAGATCATATTAAAAATGAGGGAGTAGTATCCGTTGCTAAAGGATGCCGCTTGTTGAAAACTTTGAAGCTGCAATGCATGGGTGCTGGTGATGAGGCCCTAGACGCTATTGGTTTATTTTGTTCATTCTTAGAGAGTCTGTCACTCAACAACTTCGAAAAATTCACGGACAGGAGCCTTTCTTCTATTGCAAAAGGGTGCAAGAATCTCACAGATCTTATTCTCAATGACTGCCATTTACTAACTGATAGAAGCCTTGAATTTGTAGCTCGTAGCTGCAAAAAATTAGCACGCCTGAAGATCAATGGTTGTCAGAATATGGAAACTGCTGCACTGGAGCACATTGGACGTTGGTGCCCGGGTCTTTTGGAATTATCTCTAATTTATTGTCCAAGGATCCGGGACAGTGCATTTCTGGAGGTTGGTAGAGGTTGCTCCCTTCTCAGGTCTCTTTATTTGGTCGACTGTTCCAGAATAAGTGATGATGCCTTGTGCTACATAGCTCAAGGTTGCAAGAACTTGACTGAACTTTCTATTCGGCGTGGTTATGAGATAGGAGACAAAGCATTGATATCTTTTGCTGAGAACTGTAAATCGCTTAGAGAGTTAACACTCCAATTTTGTGAGAGGGTATCTGATGCAGGGCTGACTGCAATTGCTGAAGGCTGTCCTCTTCGAAAGTTAAACTTGTGTGGATGCCAACTAATCACTGATAATGGGCTCACTGCAATTGCAAGAGGATGCCCTGATCTGGTCTACTTGGATATAAGTGTTCTCCGGTCCATAGGAGACATGGCGCTTGCGGAGATCGGTGAAGGTTGCTCGCAGCTTAAAGATATCGCGCTGTCCCACTGTCCAGAGGTCACTGATGTTGGTCTAGGCCACCTTGTCAGGGGCTGCCTGCCGCTGCAGTCATGCCAGATGGTGTACTGCAGGCGAGTGAGCAGCACAGGAATAGCGACTATCGTCTCGGGCTGCCCCAAGTTGAAGAAGCTCCTCGTTGAGGAGTGGAAGGTGAGCGAGAGGACGCGGCGCAGAGCAGGATCAGTCTTGTCGTTCCTCTGCACCGGGCTTTAA</cdnaseq>

Protein Sequence

<aaseq>MRGADLINLLLPDEILDEVLRRVAVSGAKRDLDACALVCSRWRRHDRATRRSAKLAASGARADEVLRLVAERFPALVEVSVDERISVEAAAAGPSCAAARSRRRPMYDVSPSGRRRRMSRSSNFGAHMSPFPLDQPGSDNETERTCLTDVGLTSLARGCKGLEKLSLVWCSSITSTGLVRISENCKNLSSLDLQACYIGDPGLIAIGEGCKLLRNLNLRFVEGTSDEGLIGLIKNCGQSLVSLGVATCAWMTDASLHAVGSHCPNLEFLSLESDHIKNEGVVSVAKGCRLLKTLKLQCMGAGDEALDAIGLFCSFLESLSLNNFEKFTDRSLSSIAKGCKNLTDLILNDCHLLTDRSLEFVARSCKKLARLKINGCQNMETAALEHIGRWCPGLLELSLIYCPRIRDSAFLEVGRGCSLLRSLYLVDCSRISDDALCYIAQGCKNLTELSIRRGYEIGDKALISFAENCKSLRELTLQFCERVSDAGLTAIAEGCPLRKLNLCGCQLITDNGLTAIARGCPDLVYLDISVLRSIGDMALAEIGEGCSQLKDIALSHCPEVTDVGLGHLVRGCLPLQSCQMVYCRRVSSTGIATIVSGCPKLKKLLVEEWKVSERTRRRAGSVLSFLCTGL</aaseq>

Gene Sequence

<dnaseqindica>1..315#880..1146#1462..1868#2545..2730#3085..3277#3480..3556#3935..4085#4764..5060#ATGCGGGGGGCCGACCTGATCAACCTCCTCCTCCCGGACGAGATCCTCGACGAGGTGCTACGCCGCGTGGCCGTGTCCGGGGCCAAGCGGGACCTCGACGCGTGCGCCCTCGTCTGCAGCCGCTGGCGCCGCCACGACCGCGCCACCCGCCGCTCCGCCAAGCTCGCCGCGTCCGGGGCCCGCGCCGACGAGGTGCTCCGCCTCGTCGCCGAGCGGTTCCCGGCGCTCGTCGAGGTGTCGGTGGACGAGCGCATCAGCGTCGAGGCCGCCGCGGCCGGGCCCTCCTGTGCCGCCGCTAGATCGCGCCGCCGCCCGGTGGGTTCCCTCCATCCCTATCCTTGCTTTTGTGGCTCCGTACGCGAAGTGCAGGAAATGTAGAGGATCGTAGAGATGTTTTCCGAATCGGGATTATGAGGAGATTTAGAATTTTGGGAGAAGGTTCGCATCTGTCGAAGGTTTTGTAGGGGAATTGGGGGCAAACTATCGATTTCTTATCCTGTTTTGAAGGTAGTTTGATCGATTTGGACCTTACAAATCCGCATTTCTCTTGGTTGGATGCAGAATCGTGATAACTGATAATTCTCCTGGGGATTGAGTTGTGGTATCCATTTGTACATAGTTGTATGAGATCTGCATTTCCATGACTTGTACAACAGCTGCATGCAAATAAGTAATGTGTGAGTTTTGCATATGATCAGTTTGAAAAACCATTGCTATGTGTCCACCAGCTTAGTAGTGATTAATGATTATTATACGGCAATATATATGAACTGATGTGCTCGGATGTTGTGCTATTACATGCAGTTAGATTCTTTAATGAAAACTTTCTCCTTGCAGTAGATTAACATAGCCTTGTACTGATGCACTGATGCGATACAGATGTATGATGTTAGTCCTTCTGGGCGCCGTAGGAGGATGTCCCGCAGCTCAAATTTCGGAGCGCACATGTCCCCATTTCCATTGGACCAGCCGGGCAGTGATAATGAGACAGAGCGCACTTGCTTGACTGATGTTGGATTAACTAGTCTTGCCAGGGGTTGCAAAGGGCTCGAAAAACTAAGTCTGGTATGGTGTTCTTCCATAACTTCGACAGGCTTAGTAAGAATATCAGAGAATTGTAAGAACTTGAGTTCGTTGGATCTTCAGGTAATGTCATGCTACCCGTTCCTTTGCTTTTTTCTCAGTTATTTACTTCATCATCTCTGAATTCTTTCATGTTTTTTTTTTCTTGAAGACTTCTATGCCTCTGTATTAACTGTGAGTGTCCAATGTAATATTTACTTGTAATACGGTATATGAAACCTCACAATACTTGGAACAAGCATTATTCCTGGTGATTAGCAGCAGTCTTCTCTAATTATGAGGAAATGGTGTATCTGCATGCCAAATATGCTGTTAATGTAGAGACTAATTATGCACACAAATTTTTGACCTGTCTAAATCACAATTTTTTTTCTGCAGGCTTGCTATATTGGAGATCCAGGACTTATTGCTATTGGTGAAGGCTGCAAGTTACTTCGTAATTTGAACTTGCGTTTTGTTGAAGGCACTTCAGATGAAGGCTTGATTGGACTAATAAAGAACTGTGGACAATCACTTGTCTCTCTTGGCGTTGCCACTTGTGCTTGGATGACTGATGCATCCTTGCATGCTGTTGGATCACACTGCCCTAACCTGGAATTCCTGTCACTGGAATCAGATCATATTAAAAATGAGGGAGTAGTATCCGTTGCTAAAGGATGCCGCTTGTTGAAAACTTTGAAGCTGCAATGCATGGGTGCTGGTGATGAGGCCCTAGACGCTATTGGTTTATTTTGTTCATTCTTAGAGAGTCTGTCACTCAACAACTTCGAAAAATTCACGGACAGGTACTAAGTAGAATTGTAAATCAATGCCACAATATTTTATAGAGGCATATTATCCGACTTTGTTTCACATTCTTGTTTTGCATAGTTCTGTCAAATCATTATGTGCTGGCCAGAAAGGAAGGGTACTACCAAGTTATATGGAATTAGATATAGGATACAAAATGTTGGACTAGTTATTGCACCAGCCTGCTGCCCTGCTGGAATGCTAAAAGTTAGGTGCTTATCCTAAGGTGGGAGGTCTGTTGGTCCAACACTCTTAACTATGTTCAATAACATGGGAACATTTATCAACTAACTGGACTGTTGACTGATTAAACACACTAGCCCATTAACTAACATCCATTGTTTGCAGTTGTGATGTTTTTGTTGCTGCACCAACTTAGGAATTAATTTGCCTTTAAGATAAGTTTCAAATCTACTAGTTTGACAATTTCCAGAGTATAGATATTCCTTTATCTTGACATAATTCTCCTTTGCTGTACATTACATTCTTGGAATTGCTGAACTTCATCAGGACATTAGTACATTACAAATCCATACCTGTTTTCTGTTGAATCATTTCTCTTGTACTGTAGGTGTTTGTCACACATTAATTCTTACTGCTTCCACCTTGTGCTGCTTCATTAACTTTTAAGTTCATTCAATTATTCACTTACATTTTCCTTTGGAATTGCAGGAGCCTTTCTTCTATTGCAAAAGGGTGCAAGAATCTCACAGATCTTATTCTCAATGACTGCCATTTACTAACTGATAGAAGCCTTGAATTTGTAGCTCGTAGCTGCAAAAAATTAGCACGCCTGAAGATCAATGGTTGTCAGAATATGGAAACTGCTGCACTGGAGCACATTGGACGTTGGTGCCCGTATGTTTCTTGCTGACAACTCAATATATTAAAAGTTCCTTTCTTCACTTAAAATCTATATATTGCCTTTCCTGTTTTAATTTATTTCTCTATAGTTCACATAAGTGAGCAGTATTTTAGAATGAAGGGTAATTCAAGAAAAGGTTTTAGATGCTTGATCCATAAATAAACTACAATATGGTTTCTTATTACATTGGCAAGAGTGTGGGTTACCCTACCTTTTACTTCAGAAAAAAAAAAGTAGTTGTTGCACTCTGGCATTGTTATTTAATTATCTTACCTGCATTTTTAGAGCTATGTCATATTGATATTTTGTTGCACTAACAGTAGATGATTTGCTTTCTGTCAAAACAGGGGTCTTTTGGAATTATCTCTAATTTATTGTCCAAGGATCCGGGACAGTGCATTTCTGGAGGTTGGTAGAGGTTGCTCCCTTCTCAGGTCTCTTTATTTGGTCGACTGTTCCAGAATAAGTGATGATGCCTTGTGCTACATAGCTCAAGGTTGCAAGAACTTGACTGAACTTTCTATTCGGCGTGGTTATGAGGTACTTTTGACATTTGCATAGATATTCTGCAACTAGCATACATGGTGAAATATGTCAAATATAAGATTTGACATGTTTTAGAATTAAAGTGTTAGATGGAATGACATGATTTGGTTATTACCATCTTTATTCTTTTACCATATGCAGCAATGAGAAAAAAATTCAAATATCTTTAGTTGATTGAAGTTCATTTTGTATGCAGATAGGAGACAAAGCATTGATATCTTTTGCTGAGAACTGTAAATCGCTTAGAGAGTTAACACTCCAATTTTGTGAGAGGTAAATATTATCATGCATTTAACCATCCAATTTATCTATCTTGTCCATTACTCCATGCACATCATCCCCTTACCGAAGCTCATTATAATTCTTGTTACACTTTGTTGAATGATTGGTATTAGGAAACAACTTAGATTCATAGATTGATTAATCATATCTTAGCCTATTAGGAGTGACATTGACCACGTTGTTATGCAAGACAACCTAACATTTGATAGTTGGGATAAGGACTGGCCTCTACAGTATCAAATATTCGACAGCATTTCTACAGCTCCATCCTATGCATGCTGTTCGAACTAGCACCCTTGGGGGATTGTATGTTCTGAATGCATCACTAGACATATCAGTTTCTAAATTTTGTTGCAACTTCCTTTCCAGGGTATCTGATGCAGGGCTGACTGCAATTGCTGAAGGCTGTCCTCTTCGAAAGTTAAACTTGTGTGGATGCCAACTAATCACTGATAATGGGCTCACTGCAATTGCAAGAGGATGCCCTGATCTGGTCTACTTGGATATAAGTGTTCTCCGGGTACATCACTTGTCACACTGAATTTCTTTTATGAAAAATTATCTGAAAATTGTGGTATCAATGAATAAGGCTTACTATGGTCCGCGCAGTTAGGATTCAGGACTAAAATCAGCTCATTTCAACCAAGGAACACGTAAAGAACATATGATGATACTATACTAGATACAGCTGTAGGTTTTGGTATGCAGAGAACTTCAAAATTTTATAATTTGAATAGTCTGTGTTTTAGTAGTTGTAGATCAAAGAGTTAATACTAGAAATAGATGGTCATAAAGAAGACGAACAAAAAGGATTATCTCTGTAAGATACAGCAAATAACAGGCCTATGAATAAGTTTTTATCTGCACTAATATGAAGTTCGTCATGATATCTTCTCCATTAACCAGCACTCAAATTATTCCTTTGTTTAGTTGTCTGGTGCCTTATACATAAGGTACCAGGAGTATTGCGGTACATATATGTGTTCAAAATTTATGGCTCCAGACAAAATTTGTTTAGTGCTTGTGTGGCGCGTGTGCTTGTCACAGACTCTGCTCCAACAATCGATAAATGATGTTTACTTTACAGGATTTACAGCTATTTCTTAGACAATCCTCTTATATACCCATCTGTCATTATGCGAGAGCAGTGTGATTATTTTACCTTATTTTCTGATGCCTTGTTCTCTTCAACCAACAGTCCATAGGAGACATGGCGCTTGCGGAGATCGGTGAAGGTTGCTCGCAGCTTAAAGATATCGCGCTGTCCCACTGTCCAGAGGTCACTGATGTTGGTCTAGGCCACCTTGTCAGGGGCTGCCTGCCGCTGCAGTCATGCCAGATGGTGTACTGCAGGCGAGTGAGCAGCACAGGAATAGCGACTATCGTCTCGGGCTGCCCCAAGTTGAAGAAGCTCCTCGTTGAGGAGTGGAAGGTGAGCGAGAGGACGCGGCGCAGAGCAGGATCAGTCTTGTCGTTCCTCTGCACCGGGCTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021723