BGIOSGA021765

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Revision as of 13:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021765| Description = BGIOSGA021765| Definition = Oryza sativa Indica Group BGIOSGA021765, complete gene.| tag = | tid = BGIOSGA021765-TA|...")
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Gene Name

BGIOSGA021765

Description

BGIOSGA021765

Definition

Oryza sativa Indica Group BGIOSGA021765, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA021765-TA

Ensembl Protein ID

BGIOSGA021765-PA

Length

5575

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4946884..4952458

Sequence Coding Region

4952450..4952458,4951938..4952172),complement(4950143..4950250,4949759..4949854),complement(4949567..4949659
,4949383..4949468),complement(4948958..4949086,4948427..4948560),complement(4947840..4947935
,4947440..4947548),complement(4946884..4947048

Genome Context

<gbrowseImage1> name=IndicaChromosome06:4946884..4952458 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:4946884..4952458 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGAGNGGTGTGCTCCGCCTCCGATGGCGGCGGCGGCGGAGGGGAGGCGGAGGCGTGGCGGGCGGAGCAGGAGCGGGACCGGGTGGAGCGGGTGCCCGGGCAGGACTTCGACGTCGGGTTCGCGCAGTACGCCGGGTACGTCGCCGTCAGCGAGGAGCGCGGCGCCTCGCTCTTCTACTGGTTCTTCGAGGCCGCCGACGACCCGCCGTCCAAGCCCCTCGTGCTCTGGCTCAACGGAGGGCCAGGTTGCTCATCAATTGCATATGGCGTTGCGGAAGAAGTGGGACCTTTTCATGTTAATGCAGACGGACAGGGTGTACATCTGAATCCCTATTCGTGGAACCAAGTGGCAAATATCTTGTTCCTTGATTCACCAGTTGGTGTTGGTTATTCGTACTCAAACGCCTCTGATGATATATTAAATAATGGGGATGCCAGGACTGCCAATGATTCTTTGACATTCTTAACAAAGTGGATTGAACGATTTCCTCAGTATAAAGGCCGTGAGTTCTACGTGACAGGAGAGAGTTATGCTGGCCACTATGTTCCTCAATTAGCACAAGCTATAAAGAGGCACCATGAAGCCACTGGAGACAAATCGATCAATCTAAAGGGCTATATGTGCAATAAGATTCTTGACATTGCTAGTGACGAAGCTGGGAATATCGATTCGTATAGCATCTTCACACCTACTTGCCATGCATCTTTTGCCTCCTCAAGGAACAAAGTCATGAAAAGGAAAAGGTTACATTCTGTTGGAAAAATGGGAGAGCGGTATGATCCATGCACTGAAAAGCATTCAACTGTATACTTCAATCTGGCTGAGGTGCAAAAGGCACTTCATGTTAGTCCGATCATCAACAAATCTAAATGGGAAACCTGCAGTGATGTTGTTAACACTAACTGGAAGGACTGCGAAAGATCTGTGCTGCATATCTATCATGAACTTATACAGTATGGTCTTCGTATATGGGTGTTCAGTGGAGATACAGATGCAGTGCTTCCAGTAACATCAACTAGATACAGCATCAATGCCCTCAAACTTCCGACGGTAACCCCTTGGAATGCTTGGTATGACGATGATGGTGAGGTTGGTGGCTGGACTCAAGGGTACAAGGGACTCAACTTCGTGACTGTGAGGGGCGCAGGTCATGAGGTTCCTCTTCATAGGCCCAAACAGGCTCTAATTCTCATCAAATCATTCTTGGCTGGGAGCCCAATGCCCAGTGTTCAAGATTTTTACAGTGATGTGTAA</cdnaseq>

Protein Sequence

<aaseq>MEGXVCSASDGGGGGGEAEAWRAEQERDRVERVPGQDFDVGFAQYAGYVAVSEERGASLFYWFFEAADDPPSKPLVLWLNGGPGCSSIAYGVAEEVGPFHVNADGQGVHLNPYSWNQVANILFLDSPVGVGYSYSNASDDILNNGDARTANDSLTFLTKWIERFPQYKGREFYVTGESYAGHYVPQLAQAIKRHHEATGDKSINLKGYMCNKILDIASDEAGNIDSYSIFTPTCHASFASSRNKVMKRKRLHSVGKMGERYDPCTEKHSTVYFNLAEVQKALHVSPIINKSKWETCSDVVNTNWKDCERSVLHIYHELIQYGLRIWVFSGDTDAVLPVTSTRYSINALKLPTVTPWNAWYDDDGEVGGWTQGYKGLNFVTVRGAGHEVPLHRPKQALILIKSFLAGSPMPSVQDFYSDV</aaseq>

Gene Sequence

<dnaseqindica>1..9#287..521#2209..2316#2605..2700#2800..2892#2991..3076#3373..3501#3899..4032#4524..4619#4911..5019#5411..5575#ATGGAGGGAGTATGTTAATAAATCTATACATATATGTGCTTAAATTCATTAACATCTATATAAATGTGGACGGTGATAGAAAGTTTTGTAACATGAAACGGTGGGAGTAGTAATAAAATAAAATTTCGAGGGGAATAGTAGCTCATTATAACAAGCTACTACTACTAGTACCCCCACTTGGTAGCACGCAAGTCACTCTCTCCGAGATCGCCGCGATGACGACGCACGACGACGACGAGCGCCATCGGCTCCCTCCTCGTGCTCCTGCTTGTGGTGGTGGTGGGAGGNGGTGTGCTCCGCCTCCGATGGCGGCGGCGGCGGAGGGGAGGCGGAGGCGTGGCGGGCGGAGCAGGAGCGGGACCGGGTGGAGCGGGTGCCCGGGCAGGACTTCGACGTCGGGTTCGCGCAGTACGCCGGGTACGTCGCCGTCAGCGAGGAGCGCGGCGCCTCGCTCTTCTACTGGTTCTTCGAGGCCGCCGACGACCCGCCGTCCAAGCCCCTCGTGCTCTGGCTCAACGGAGGTGAGCGCCCGCCGCCGCCACTGCCCCGCCTCTCCGATTTGGTCTCTTGTTGACTTGTACTGCTGCTGCTGCTGCTGTTTTCTCATCCGAGTCCGAGACGCACGACAAATAGCTGTTGCGTTCGTGGTTGGGGGAAAGTCGCTACCTTCCGTTGATTCCTTATCTGATGAACAGCTTTCTTCTGCAGTATTCAGATGCACAATTTGGGATTTTGGGGGTGGGGATTATGCTAAATTGCTAAGACTAGTACATGGGGATTAGTTGATTTGATATCTGGAGGGTTTTAGTTATTACTGATGTGGTAGAAATGCACAAGTAACTGTAGTGGCTGACATGTGGGCCCGAGAGTGATGGGTCCACATGTCAGTCATGGTGAACAGTAATCTTCTTCCGATGAGGAGGGGCTGTTGTCTCTACACAATTTCCGGATCAAACTCATTTTCATTTCTTACTAAAAAACTCATTTTTATTTTGGAGATACGGAAGGGCAAATATTTTTAGTATGGTCCTCGGGTTTTTAAAATTGGTATAGTTTTTCTTATTATTGATTCATATCGTATTTCACATTTGGGCACCACAATTAGCACTTATTTAGAACTCTTATAGTTTAATTTTGTGATTTTTCCCTTTTGTTTTCACATGTACTAGGCTTTACTGAACTAACCTCCAAGCTTCCAGCAATAGCTATCAAAATTTTCCACTACACAGCATTCATATACATCCTCTAAAGCCAGCTTATTCTAATTTCTTATAGTTAAAATATGAGAGAATTTATTCTATGCCACTGAGTTTACCTTAACTTCAACGATTTGCTATTGACTTTGTCTCCCTCTATAATATGCCACTGACTTTATCATTTTTTTCCTACAAGGGGTGGATACTTTTCAATAAATGCCTAAAATACCCTTCAAGTCATACAAGAATTGACAATTATTTGACCCACTAGAAGTTCTAAAAAACATGAAAGTTTTTGTGTACTTAGCCTTCTTACAAAATATTAAAGTTTGTGTGTATATTTTAAGATTTTCTTTCAATTTTTTTTTAAAAAGCTATTTTATATAGCATATGAAAGAGGAATCACATACACGAAAGATAGTTGCATACAAAAATTATATAACATGTGAATGATGATGTACAAAAAGAACATTAACACAAGAGTATTCTATTAGCATATAAAACATAAATTATATTTTTTAAAGATAATACATGCAAAATAAAAATCTTGACATATACACACAGTTCTATATTATATAAGGAGGCTACACAAATTTTTTTATATTTTTGTAGGTCAATCAATTGTAACCTCTTGTAAGTCTTGAAAGGCATTTTAGGCAGTTTTTGAAAAGTATACACTCCAATGGTGTATTATATAAAAAATTGACAAAGTCAGTGGCATATTATAGATGGAGTCGATGGCAAATTGTTGAACTAGAGTAAACTCAGTGGCATAAAATGGTTTCTCTCTTAAAATATTTCAAGATGACCAGGACAGCTTTTCTATTCTTACACGAGGCAAGTTGTTGTCGGTGAATTTGATTTTTTTTTCTTGTGGTATTGATAAATGATAATTAAGAACCTTAACTGGAATATTATGCATTAGTTTCTCCATGAAATTCATTTGGTTGCAGTGCTACGATCCTTGAGTTCTGAGAGCACACTACTGACTTTACTGCATTTAATCTTCCAGGGCCAGGTTGCTCATCAATTGCATATGGCGTTGCGGAAGAAGTGGGACCTTTTCATGTTAATGCAGACGGACAGGGTGTACATCTGAATCCCTATTCGTGGAACCAAGGTAATATTCAACAGAAGCAAAATTGCCTTTACTAACTTAAATCCTTTATATGGTATCGCCTTCTCTTATTTTTATCATTTTGATACACCCTACTACTAGTTGTCAGGATGAACTTGGATACTTTTCTTCATAAAAAAGGAAGATGCTTGGCCCTCCTTCGCATTTTCTCTCTCTCTCTTAATTCTAGTCTCCCTGGAGTGCATATATTATATCAGTCTTATAACTTATTGGACTACTAGATTGGTTGTTGGTATGATATACTTGTTAACAATTCCTGAAATTTTGCAGTGGCAAATATCTTGTTCCTTGATTCACCAGTTGGTGTTGGTTATTCGTACTCAAACGCCTCTGATGATATATTAAATAATGGGGATGCCAGGACTGGTACTTTCACTTTGCTTTTCATGTGGTTGAAATGAAATTTATGTCCCCCAGATGTAACAATATTAGAGTTTGCTCACTGATATTCTTCTTGTTTCACAGCCAATGATTCTTTGACATTCTTAACAAAGTGGATTGAACGATTTCCTCAGTATAAAGGCCGTGAGTTCTACGTGACAGGAGAGAGTTATGCTGGTCAGTGACTATTTTATGAGCTTCTATTTCTATATCATCCATTGTTTCTTGTATTTACTATTTAAAAAATTAAGCCCAACTAAATCTTAATTGGTTAGGCCACTATGTTCCTCAATTAGCACAAGCTATAAAGAGGCACCATGAAGCCACTGGAGACAAATCGATCAATCTAAAGGGCTATATGGTATGGCTTTGGTGCTTTTGCTTCTAGTTCTCTAATTTTGTTATGCAATTTGATTGCTTAGTTCAAAAGTAGCAAAGCATATGTTTTGATTTCTTAGTTCAAAACTGTATTATTTAATTTATTTTCTTTGTATGTAATGACATGTTTTTGCAGGTAGGAAATGCTCTGTTCGATGATTTCCACGATCACCTTGGCATATTTCAATTCATGTGGACCATGGCTTGATTTCTGATCAAACATACAGGCTACTGAATGTTTTCTGTGACTACGAGTCCTTTGTGCATACATCTTCACAGTGCAATAAGATTCTTGACATTGCTAGTGACGAAGCTGGGAATATCGATTCGTATAGCATCTTCACACCTACTTGCCATGCATCTTTTGCCTCCTCAAGGAACAAAGTCATGAAAAGGAAAAGGTTACATGTAAGTATTGAAGCTCCTGCAACTCAAGTTGAGTTTTAATATTTTACATTTACATGATATTAGTAAAATAAATTTAATGGTCTTAATACTTAGCCATGCATGCATTGAGGTGGTTGCTAAGTAACTCTAGTGGAATCAAGAAAATCGTAATGCTTTTCTCCAGAAAAAAAAAAGAAAAAACAGTATAGTGAAAGGCACCATATTTTATCTACTTAAAAAAGACGTCCAAAAGAGTTCTGAGCTTGGGCACAAAAACTGATTTTATACAAGCAGGTGAAACTTTCTTGATCTGACCATATGCATTTGTATTGCGTGCAATTGGTCGCACACTGCTCATAAACTCCTGTATGTATATGTTTGTATTTATCTGATTCACAGTGATGGCTTCTTTTTATAGTCTGTTGGAAAAATGGGAGAGCGGTATGATCCATGCACTGAAAAGCATTCAACTGTATACTTCAATCTGGCTGAGGTGCAAAAGGCACTTCATGTTAGTCCGATCATCAACAAATCTAAATGGGAAACCTGCAGGTAAATCTTATGTTTTTTGGAAACTCGGTTGATATTACTGTTGCTGTGGCACGCTTGAGTACTAATGATGATTCATTTCTTCATGCTTTTGAAGAGGATTATTTATCACATCTCTACAATTAACCTCGTGGAAGGCTCTTGCCTTTTCGTAGCTGCAATTATTTCCATATATTATCAGGATTAAAATTTGACCCCGCCTCCACAGCTCCACCCACCCCCTCGATGTAGGACTTTCCAATGTCGTAAAAAATGTGGCATTGGGAGAATTCTATTTGAATTTGAGTCTGAGTATTTTTAGGCATCCTAGATTAAGTTCATTATTTTTCAGACCAATAAGGCACGATTTAATATATTATTGTGATCTAGTGTTTCCAAGTAACTGAAATTGGAAAGCATGAATTTCGAAGTCACTTCTTGTTGATAAGAAGGTCAGGAAACTAGTTTTTTTCTTGTCTAATCTATTAACTTGTTGACACTAACATTCTTGGCAGTGATGTTGTTAACACTAACTGGAAGGACTGCGAAAGATCTGTGCTGCATATCTATCATGAACTTATACAGTATGGTCTTCGTATATGGGTGTTCAGGTGATTCCTGGCTTTGTATTATTGTGTACTTAATAGGTCTTTGTCCACTCAGGCACCCAAAGTTAGATCCATTTCATTTGCTACCATAGCTTCCTGCTTCAATTGGTTCTATGTTCAAAAAATAGTTAGGATATAAAAAGGTGGGTATAAATTTGTCATGGCAAGTACAACTGATATCCTGCATACATTATTTTCCCCAGAATTCGCTGTCATTCTGCAAGTTTTTTCCCTTTTTGTTCTGCAAGATAAACACCTTTTTATTTGCTTCGATCTTCCTTTTACTTTGACCAGTGGAGATACAGATGCAGTGCTTCCAGTAACATCAACTAGATACAGCATCAATGCCCTCAAACTTCCGACGGTAACCCCTTGGAATGCTTGGTATGACGATGATGGTGAGGTAGGGTCTCTTCTTGACTAAAAAACACCATGAATGTTCAAAAGCTTGATAGTTTCTGGTTTGTTTTGTGCACAATACGTCTGGTCCTAGACAACTCATAGTTTTATTGTGGATATGTGGTTTTGTGGCACATATGTCCTAAACTCCTAATGGTCTAGTCACCTAGCTTTAAGTTGAGATTATCTGGCATTAGAGTTGCAGGGAGCCAGGAAATCACTGGCAGAGCCCTTGCTCCCAGGAGAAAAATCTCACAAGTCATATGGCTCATTAGCTGTTTCAGGCTACACCATTCTTTGTGTTTATCATTTGTTTGTTACTAGATCAATTATATATGTTGTTTGGGGAATCTATTCTCCAGTTGTAGCTTCTGAATCTGTTTGTGTTTAATCAGGTTGGTGGCTGGACTCAAGGGTACAAGGGACTCAACTTCGTGACTGTGAGGGGCGCAGGTCATGAGGTTCCTCTTCATAGGCCCAAACAGGCTCTAATTCTCATCAAATCATTCTTGGCTGGGAGCCCAATGCCCAGTGTTCAAGATTTTTACAGTGATGTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021765

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA021765&oldid=44290"