BGIOSGA021801

From RiceWiki
Revision as of 13:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021801| Description = HeparanasePutative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021801, complete gene.| tag...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021801

Description

HeparanasePutative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021801, complete gene.

LocusTag

OSJNBA0035I03.13

Ensembl Transcript ID

BGIOSGA021801-TA

Ensembl Protein ID

BGIOSGA021801-PA

Length

2704

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4531968..4534671

Sequence Coding Region

4534456..4534671,4534322..4534358),complement(4534053..4534236,4533804..4533952),complement(4533269..4533502
,4532966..4533155),complement(4532764..4532889,4532411..4532510),complement(4531968..4532309

Genome Context

<gbrowseImage1> name=IndicaChromosome06:4531968..4534671 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:4531968..4534671 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGATGAGGCGGTTTCTTGGTGGGCTATGCTTCTTGGCTCTGCTGCGGCTGGGCGGCGCCGCGGAGGCCGTGGTCGGGGTCGCCGGCGTTGACGGGCGGCGCGCCATTGCCGCCACCGACGAGGACTTCGTGTGCGCGACGATGGACTGGTGGCCGCCGGACAAGTGCGACTACGGCACCTGCAGCTGGGGCCTCGCCTCCCTCCTCAACCTGGATCTCTCCAACAAAATCTTGCTCAATGCCATTCGAGCCTTCTCGCCGTTGAAGCTGCGGCTGGGCGGGTCGCTGCAGGACAAGCTGGTGTACGGCACCGGCGACGGCGGAGGGCCGTGCGCGCCGTTCGTCAAGAACACGTCGGAGATGTTCGGCTTCACGCAGGGATGCCTGCCTCTCCACCGGTGGGACGAGCTCAACGCCTTCTTCCAAAAATCCGGCGCGAGAATCGTGTTCGGGCTGAACGCTCTCAACGGCCGGGTTCCGTTGCCGGATGGGTCGATGGGAGGGCCATGGGATTACACCAATGCTGCATCGCTGATTCGTTACACCGCGAGCAAGGGTTACAAAATTCATGGATGGGAGCTTGGAAATGAACTCAGTGGCAGTGGAGTTGGAACAAAAGTTGGGGCTGACCAATATGCTGCAGATGTGATTGCACTGAAATCACTAGTTGACACTATCTACCAAGGCAATCCATCAAAGCCACTTGTTCTTGCTCCTGGAGGTTTCTTTGATGCAGGCTGGTTTACTGAAGTTATAGTCAAAACCAGGCCAAACCTACTGAATGTGGTCACCCATCACATCTACAACTTAGGGCCAGGAGTGGACACACATCTGATTGAGAAGATCCTGAATCCATCTTATCTTGATGGAATGGTGAGCACATTCAGCAATCTTCAGGGGATACTGAAATCTGCCGGGACTTCGGCTGTCGCATGGGTCGGAGAGTCCGGAGGCGCGTACAACAGCGGCCGCCATCTTGTTACCGATTCATTTGTGTTCAGTTTCTGGTTTTTGGATCAGCTTGGGATGTCAGCAAAGTATGACACGAAGAGTTACTGCAGACAAAGTTTGATTGGTGGCAACTATGGCCTGCTAAACAAAGAAACATTCCAACCAAATCCTGACTATTACAGCGCTCTACTATGGCATCGCCTCATGGGAACCAAAGTTCTATCTGCAACATTCAATGGCACCAACATGATTCGCACTTATGCGCATTGCGCAAAAGATTCTCCAGGAATAACACTACTGCTGATCAACCTCAGTGGCAACACCACAAGCCAAGTTTCAGTGACAAGTGAAGGTGCTCATGCAAACACTGTGAAGAAGCATAGCAGAAAGACCAGGCATCTTGCAGCTGGATCAATGAGAGAAGAATACCATCTTACTGCCAAAGATGGCAGCTTGCAGAGCCAAGTGATGCTGCTGAATGGCAGGGCATTGGTTGCTGATGAAAATGGGGAAATCCCTAGGCTGGAGCCTGTCAAAGTGGATGCAGCACAGCCAATAGCTGTGGCTCCTTACTCCATTGTGTTTGCTCACATACACAATTTCCCTGCCCCTGCATGTAGTTAG</cdnaseq>

Protein Sequence

<aaseq>MEMRRFLGGLCFLALLRLGGAAEAVVGVAGVDGRRAIAATDEDFVCATMDWWPPDKCDYGTCSWGLASLLNLDLSNKILLNAIRAFSPLKLRLGGSLQDKLVYGTGDGGGPCAPFVKNTSEMFGFTQGCLPLHRWDELNAFFQKSGARIVFGLNALNGRVPLPDGSMGGPWDYTNAASLIRYTASKGYKIHGWELGNELSGSGVGTKVGADQYAADVIALKSLVDTIYQGNPSKPLVLAPGGFFDAGWFTEVIVKTRPNLLNVVTHHIYNLGPGVDTHLIEKILNPSYLDGMVSTFSNLQGILKSAGTSAVAWVGESGGAYNSGRHLVTDSFVFSFWFLDQLGMSAKYDTKSYCRQSLIGGNYGLLNKETFQPNPDYYSALLWHRLMGTKVLSATFNGTNMIRTYAHCAKDSPGITLLLINLSGNTTSQVSVTSEGAHANTVKKHSRKTRHLAAGSMREEYHLTAKDGSLQSQVMLLNGRALVADENGEIPRLEPVKVDAAQPIAVAPYSIVFAHIHNFPAPACS</aaseq>

Gene Sequence

<dnaseqindica>1..216#314..350#436..619#720..868#1170..1403#1517..1706#1783..1908#2162..2261#2363..2704#ATGGAGATGAGGCGGTTTCTTGGTGGGCTATGCTTCTTGGCTCTGCTGCGGCTGGGCGGCGCCGCGGAGGCCGTGGTCGGGGTCGCCGGCGTTGACGGGCGGCGCGCCATTGCCGCCACCGACGAGGACTTCGTGTGCGCGACGATGGACTGGTGGCCGCCGGACAAGTGCGACTACGGCACCTGCAGCTGGGGCCTCGCCTCCCTCCTCAACCTGGTCGAGAATTTCTCGCTCCAAATTCTCTCCAAATTTTTCTCTCCTCCTCCTCCTCCGGTGAAATTAATCCAAACTCACACGAGCTTTGCATTTGCAGGATCTCTCCAACAAAATCTTGCTCAATGCCATTCGAGGTAGTGTGCAGCAGTAGCTCTCGTGCTCGTGCTTCTTCTCCGGCGACGTGATCGGAGTTTACCTTGTTTTTTTTTTTTTTGGCAGCCTTCTCGCCGTTGAAGCTGCGGCTGGGCGGGTCGCTGCAGGACAAGCTGGTGTACGGCACCGGCGACGGCGGAGGGCCGTGCGCGCCGTTCGTCAAGAACACGTCGGAGATGTTCGGCTTCACGCAGGGATGCCTGCCTCTCCACCGGTGGGACGAGCTCAACGCCTTCTTCCAAAAATCCGGGTAATCCCAAATTGTCTAGCCTCTGAATCTGAAAAGGAAGTTGTACTGTATCTTTTTTTTTTTAGCACGAGAATTCGACGAAATTTGCTCAAATTCGCAGCGCGAGAATCGTGTTCGGGCTGAACGCTCTCAACGGCCGGGTTCCGTTGCCGGATGGGTCGATGGGAGGGCCATGGGATTACACCAATGCTGCATCGCTGATTCGTTACACCGCGAGCAAGGGTTACAAAATTCATGGATGGGAGCTTGGTAAGTTCAAATCATCTTGCAAATCGAATCGACCGTGCCTCGAAATGTGCTATCTCTGGGTGCTTTTTGGTCAGAAACAAAGCTGATTTCTCAGTTCTGACGCATGCTGTCAACATCTGTTTAGTTTAATGTTCAGGTTACCAAACCTACCAAATAAAGAACAGGATGAGAATTCTTGTTCTACCTGCCCTTCCATTTCTGCTTTCTTTTAGCAAAAGAATCTTTATTAGTTAGAAGTACAAAAATTCTTCATGCAATTCAACCAAGTTGATTTTGGGGAAGATTTGTACTGTCCTTGCAGGAAATGAACTCAGTGGCAGTGGAGTTGGAACAAAAGTTGGGGCTGACCAATATGCTGCAGATGTGATTGCACTGAAATCACTAGTTGACACTATCTACCAAGGCAATCCATCAAAGCCACTTGTTCTTGCTCCTGGAGGTTTCTTTGATGCAGGCTGGTTTACTGAAGTTATAGTCAAAACCAGGCCAAACCTACTGAATGTGGTCACCCATCACATCTACAACTTAGGGCCAGGTATGCTCACCATGAACTGCTGATAATTTGGTACATGAATTGGAGTGTGAAAGTTCTGAACAAACGCGATGGATTATTCCTGGCTGAAAGTTCTGATAATTTGGTCGCCGCAGGAGTGGACACACATCTGATTGAGAAGATCCTGAATCCATCTTATCTTGATGGAATGGTGAGCACATTCAGCAATCTTCAGGGGATACTGAAATCTGCCGGGACTTCGGCTGTCGCATGGGTCGGAGAGTCCGGAGGCGCGTACAACAGCGGCCGCCATCTTGTTACCGATTCATTTGTGTTCAGTTTCTGGTAAACCAAAAGCTTCTGAAGTGCAAAAATTGTAGATATCACCAAAGAGGTTGTTCTGAATTTGTGTGGTTTTCAGGTTTTTGGATCAGCTTGGGATGTCAGCAAAGTATGACACGAAGAGTTACTGCAGACAAAGTTTGATTGGTGGCAACTATGGCCTGCTAAACAAAGAAACATTCCAACCAAATCCTGACTATTACAGGTAACTGATATTCTTGGGCTGTTCTTCAGTAGGTAAAAGGCAACTTTCATATGAACAATTTCCTTTGTATGATAGTGCAAACAAAGATTTTGATGCCTCTAGCAAAAGTTTAGAATTATCCTTACACTTGGAAACTAGAAGTAGCTACTTAATGGCCAAGATAAGAATTGGTTCCATTGCATATAATCTTGCAGAATCAAGTGCCAAACTTGTTGCTTTCATGACATTTCCCCTTACTTTTATTCCCCTGCAGCGCTCTACTATGGCATCGCCTCATGGGAACCAAAGTTCTATCTGCAACATTCAATGGCACCAACATGATTCGCACTTATGCGCATTGCGCAAAAGATTCTGTAAGCAATCCAGAAAACCCAATGCATTTTCATCAGAACAATGAAAAAAAAAACTCATCTACTAACTGAATCTATGCTCAATCTCTTCCTTGCAAGTTCAGCCAGGAATAACACTACTGCTGATCAACCTCAGTGGCAACACCACAAGCCAAGTTTCAGTGACAAGTGAAGGTGCTCATGCAAACACTGTGAAGAAGCATAGCAGAAAGACCAGGCATCTTGCAGCTGGATCAATGAGAGAAGAATACCATCTTACTGCCAAAGATGGCAGCTTGCAGAGCCAAGTGATGCTGCTGAATGGCAGGGCATTGGTTGCTGATGAAAATGGGGAAATCCCTAGGCTGGAGCCTGTCAAAGTGGATGCAGCACAGCCAATAGCTGTGGCTCCTTACTCCATTGTGTTTGCTCACATACACAATTTCCCTGCCCCTGCATGTAGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021801

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA021801&oldid=44326"