BGIOSGA021847

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Revision as of 13:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021847| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021847, complete gene.| tag = P0681F1...")
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Gene Name

BGIOSGA021847

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021847, complete gene.

LocusTag

P0681F10.40

Ensembl Transcript ID

BGIOSGA021847-TA

Ensembl Protein ID

BGIOSGA021847-PA

Length

4374

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3787177..3791550

Sequence Coding Region

3791359..3791550,3790977..3791265),complement(3790189..3790274,3789825..3790048),complement(3789678..3789744
,3789343..3789462),complement(3788461..3788946,3787572..3788330),complement(3787177..3787371

Genome Context

<gbrowseImage1> name=IndicaChromosome06:3787177..3791550 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:3787177..3791550 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGGAGGACGACGAGCGAGCCGAGGCGGAGGCGGAGGCGCGGCGGGAGAAGGAGGCCGGCAACGCCGCCTACCGCAAGCTCTACCTCGAGACGGCCGTGCGCCACTACACCCGCGGCGCCCTCCTCGACCCCCGCGACATCTCCTTCCTCACCAACCGCGCCGCCGCCTACCTCCTCATGTCCAAGTACAAGGAGTGCGTGAGGGATTGCGACGAGGCGGTGGAGAAGGGGCGGGAGCTACGCGCCGACAACAAGCTGGTCGCGCGGGCGCTGGCGAGGAAGGCGTCGGCGCTGCTCAAGCTCGCCGCCTGCGCCGCGGACTACGACCCGGCGATCAGGGCGCTGCAGCAGTCGCTGGCCGAGCACTACAGCGAGGAGACGCTCGCCAAGCTGGGCGAGGCGGAGGAAGCCAGGAAGGAGATTGAGGAGCGGGAGCGGCTTGATCAGGAAGCTGCCGATCACCACCGAGACAGAGGCAACGATTTCTTCAAGCAGAAAAGGTACCAGGAAGCAGCAATGCACTATACTGAAGCCATGAAAAAGAACCCAAAAGATCCCAGGGTTTTTAGCAACAGAGCCCAATGCCACATCTACCTAGGAGCATTGCCTGAAGGTCTTGAAGATGCAGATAAATGCATAGCGTTGGATCCTACTTTTCTGAAAGGCTATCTGCGTAAAGCTAAAGTTCAGTTACTTATGGGCAATTATGAAATTGCTCTGGCAACTTATGTAGAGGGTTTGAAGTGTGACCCAAACAACCTCGAAGTTCTTGATGGCTTAAGGAGATGTGCAGCATGCATTAAAAGAGCTAATGGCGGTGATTCTAGAGCAGAGGACTTGAGAGAGATACTGGGAGATTTGCATTTGAATGATGATCTGTGTAATAAACTTCAAAAAAGCATGGATGAAGCTGCGGTGTTGAAGAAGGAAGCATCCGACGAGCGCTTAAAGCGGATTGAATCTGAACGATTGGCCAGGACATTGGAAGATTTGTATTTAAGCCAGGTCCAACAAAGGAAAGAAACAGAGGAATCTCTTTCAAGGGTACAACAAGAGTTTGAACAACTTAAAATACAGCAAGATGAGGTCACCGTGGAACTTCAGAGAGTCAATGAGCAGAATGAGAATCTACTAGGTCAACTCTCAGACTCCAGAGAGCATTTTGAATGGCTTCTATCTGAGCATGACCAATTGCTACGTGAACGAGATAATGCAGTTCGAGAGGTTGAAGAACTACGTCAGAAAAGAGGACAGATGCTTTCAGTTTTGGTTACAGCGATGCACTGTGAATTTTCATCATCTGAAGTGGAATCTGCAACAGAAAATTTTAGTAATTCATTGAAGATTGGAGAAGGTGGGTTTGGCTGCGTATACAAAGGTATCCTCCGGAACATGACAGTTGCAATAAAGGTGCTGAGACCTGATAGTTTACAGGGACAATCACAGTTCGAACAAGAGGTTTCTATCCTCAGTAGAGTGAGACACCCTCACCTTGTGACTCTCTTAGGAGCTTGCTCAGAGTCTTCAACACTCGTATACGAGTTCCTGCCAAATGGAAGCCTAGAAGATTTTCTTATGTGTTCAGATAAGAGGCAAACTCTGACGTGGCAGGCTCGGATTCGAATTATTGCTGAGATATGTTCAGCACTAATCTTTCTGCATAAGAATAAACCTCACCCAGTTGTTCATGGAGATCTCAAGCCTGCTAACATTCTCCTTGGTGTTAACTTAGTCAGTAAGCTTAGTGACTTCGGTATTTCTCGCCTCCTAATCCAGTCCAGCACCAATAACACCACCCTGTACCGCACCATGCATCCTGTGGGCACCCCTCTGTACATGGACCCAGAATTTCTTTCCACTGGAGAGTTGACACCTCAGTCTGATGTTTATTCATTTGGTATTGTAGTCTTGCGTCTTTTAACAGGAAAGCCTCCTGTTGGTATAAAGAAGATCGTGGAGGATGCAATGGAGAAAGGTGACTTGAACTCAGTAATTGATACCTCAGTGGGAGAGTGGCCTCATCTGCACATCGAGCAGCTGGCATACCTTGCTCTCAGATGCACTGAGTTAAGCAGGAGGTGCCGCCCTGATCTTTCAGGTGAGGTGTGGGCAATAGTTGAGGCTATAAGGGATGCTGCATTATCTTCACCTTCATCCTCTAGATCAGCACAGGATCAAAACAGTCCACCGTCATATTTCATCTGTCCTATATCTCAGGATATCATGGATGATCCTCACATTGCAGCAGATGGATTCACCTATGAAGCTGAGGCAATCAGGAGTTGGCTCTGCAATGGCCATGACACGTCTCCAATGACCAACTTGCTACTTGAACATGAGGAGCTCATTCCGAATCGCGCACTGCGTTCTGCTATTCAGGAGTGGCTCCAGCAGCACAGCATGTCGCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MEAEDDERAEAEAEARREKEAGNAAYRKLYLETAVRHYTRGALLDPRDISFLTNRAAAYLLMSKYKECVRDCDEAVEKGRELRADNKLVARALARKASALLKLAACAADYDPAIRALQQSLAEHYSEETLAKLGEAEEARKEIEERERLDQEAADHHRDRGNDFFKQKRYQEAAMHYTEAMKKNPKDPRVFSNRAQCHIYLGALPEGLEDADKCIALDPTFLKGYLRKAKVQLLMGNYEIALATYVEGLKCDPNNLEVLDGLRRCAACIKRANGGDSRAEDLREILGDLHLNDDLCNKLQKSMDEAAVLKKEASDERLKRIESERLARTLEDLYLSQVQQRKETEESLSRVQQEFEQLKIQQDEVTVELQRVNEQNENLLGQLSDSREHFEWLLSEHDQLLRERDNAVREVEELRQKRGQMLSVLVTAMHCEFSSSEVESATENFSNSLKIGEGGFGCVYKGILRNMTVAIKVLRPDSLQGQSQFEQEVSILSRVRHPHLVTLLGACSESSTLVYEFLPNGSLEDFLMCSDKRQTLTWQARIRIIAEICSALIFLHKNKPHPVVHGDLKPANILLGVNLVSKLSDFGISRLLIQSSTNNTTLYRTMHPVGTPLYMDPEFLSTGELTPQSDVYSFGIVVLRLLTGKPPVGIKKIVEDAMEKGDLNSVIDTSVGEWPHLHIEQLAYLALRCTELSRRCRPDLSGEVWAIVEAIRDAALSSPSSSRSAQDQNSPPSYFICPISQDIMDDPHIAADGFTYEAEAIRSWLCNGHDTSPMTNLLLEHEELIPNRALRSAIQEWLQQHSMSL</aaseq>

Gene Sequence

<dnaseqindica>1..192#286..574#1277..1362#1503..1726#1807..1873#2089..2208#2605..3090#3221..3979#4180..4374#ATGGAGGCGGAGGACGACGAGCGAGCCGAGGCGGAGGCGGAGGCGCGGCGGGAGAAGGAGGCCGGCAACGCCGCCTACCGCAAGCTCTACCTCGAGACGGCCGTGCGCCACTACACCCGCGGCGCCCTCCTCGACCCCCGCGACATCTCCTTCCTCACCAACCGCGCCGCCGCCTACCTCCTCATGTCCAAGGTCAGGCTCTCAGTCTCAGCCATGCCCCCAAACCCCTCCTCTCTCTCCGATTGTTTAACCTCGCGGCGATGGCGATTGGTTTCTCCGTTGCAGTACAAGGAGTGCGTGAGGGATTGCGACGAGGCGGTGGAGAAGGGGCGGGAGCTACGCGCCGACAACAAGCTGGTCGCGCGGGCGCTGGCGAGGAAGGCGTCGGCGCTGCTCAAGCTCGCCGCCTGCGCCGCGGACTACGACCCGGCGATCAGGGCGCTGCAGCAGTCGCTGGCCGAGCACTACAGCGAGGAGACGCTCGCCAAGCTGGGCGAGGCGGAGGAAGCCAGGAAGGAGATTGAGGAGCGGGAGCGGCTTGATCAGGAAGCTGCCGATCACCACCGAGACAGAGGTTTGATCATTTCTTTTTTTTCCAGATGAAACGTTGTTCTTTTCTATGTGTTGTTGTCGATTAGTGCAATGTGTAAGATTAAAATAGAAATTGATTGCTGTGCACCGATCATCTAATGCTGTTGGTGTTGTTTCAATTGTCAATTTGCCACTCAATTGGAACAGATACACATTTGTTACATGCTATTCCTGTTCATGTAGGATCCTTACCCATTTTTAAATAAATAATTTGGCAGGAGCACTACCTATCCATTATTAAAAGCAAAGAGTGTAGAAGTAGCCTTGTACAAGGTAGGTGTCCAGCTAACTTCCCTTGCCTAGCACCTCGTTGACTGTATGCTGTATTATCAGATATTGCTCCAAAGCATCGCCGTTGAGTGTCAACTGTCAAGTACTCTAGGCTGGAGTTCTAGGAGATTCCATGAGTAAACTTCAAATTTGCAAGAAGAAAGCATACTATTAAAGTAGAATATCACTCTCAATAGTTTTAATTCTAACTTCAGTTGTGAGTTGGAGACTCAGAGAAGTGCGGAAAAAATGTTATGGTTGTTCATGAATGGAAGTGCAGTAACACAATAAATTGGATAGGGGTCCCTTTTCTTCAACCATTATATAATAACCAGCTCCTAGTTTGTAATACACTAGGTATGTCATGCAATTGTAATGTACGTATGCTTCTTCTCACTGTGTACACATGTTGCAGGCAACGATTTCTTCAAGCAGAAAAGGTACCAGGAAGCAGCAATGCACTATACTGAAGCCATGAAAAAGAACCCAAAAGATCCCAGGGTATTGATTTACACTATTACACTGGTTGTATAACAAGTTAATGCTTTTTTTTTCCCTTAGTGAAAACTATATCTCAAGCTGCCCCTTTTTAGTTTTGGTACTGATATTTTTATACCTTTTAATGACTGATGATTGCCCAGGTTTTTAGCAACAGAGCCCAATGCCACATCTACCTAGGAGCATTGCCTGAAGGTCTTGAAGATGCAGATAAATGCATAGCGTTGGATCCTACTTTTCTGAAAGGCTATCTGCGTAAAGCTAAAGTTCAGTTACTTATGGGCAATTATGAAATTGCTCTGGCAACTTATGTAGAGGGTTTGAAGTGTGACCCAAACAACCTCGAAGTTCTTGATGGCTTAAGGAGGTAGCCCTTTTCAGTCCAATGCTATCATCAGTGATGCTGTTATTATTATTTCAAGTAACTTATGTGTTTGGTCAATGTAGATGTGCAGCATGCATTAAAAGAGCTAATGGCGGTGATTCTAGAGCAGAGGACTTGAGAGAGATACTGGTCAGTTTAGTTACTTTTTTTTAAACAAGTCATCCATGATTACCTGTTACAAATCTGGATTCTGGAACTTGACTAGCACCGTGCTCAAGCATAATTAAGCTTAGGAAGTAGCTTTATGAGTGAAAACTGACAAATAAGTTCTGTGATGCTAATGCATTGCTCATCAAAACCCTGCTAGCTATTAAATTATATTATCTTATAAATGATCCTTGCAGGGAGATTTGCATTTGAATGATGATCTGTGTAATAAACTTCAAAAAAGCATGGATGAAGCTGCGGTGTTGAAGAAGGAAGCATCCGACGAGCGCTTAAAGCGGATTGAATCTGAACGATTGGTAAATTCATTACGGTTTCTCTAAACAGCCAGTGCATTATTATGATTATCTTTGCAAAAAGGTTAGCTTGACCGGAGAGGTATCATCATCCAATCATTTCTTGTTGTGGACCATTTGATTCTATAGAGTGCAAAACAACATTCACATCTAATGTTGGTGCTGCTACAATTCCAAGAAATAGGCAAGCTTGAGCAGATCATTGCCACTGTATCTACTACTACCAATTTGCCAAATCCCAATCTCTGCATTCAAACCAGCACTTGCCATATGAAAGTACTTTTCAGTAACAGTTTTTTCCTTAAAAAAAAAATCCAGGATGTCACAAGCTATTGAATGAAGTCATAAATCAAGGTATCTGTCTAAATGATACGAATGACAGCTACTTGATTTGTGCAGGCCAGGACATTGGAAGATTTGTATTTAAGCCAGGTCCAACAAAGGAAAGAAACAGAGGAATCTCTTTCAAGGGTACAACAAGAGTTTGAACAACTTAAAATACAGCAAGATGAGGTCACCGTGGAACTTCAGAGAGTCAATGAGCAGAATGAGAATCTACTAGGTCAACTCTCAGACTCCAGAGAGCATTTTGAATGGCTTCTATCTGAGCATGACCAATTGCTACGTGAACGAGATAATGCAGTTCGAGAGGTTGAAGAACTACGTCAGAAAAGAGGACAGATGCTTTCAGTTTTGGTTACAGCGATGCACTGTGAATTTTCATCATCTGAAGTGGAATCTGCAACAGAAAATTTTAGTAATTCATTGAAGATTGGAGAAGGTGGGTTTGGCTGCGTATACAAAGGTATCCTCCGGAACATGACAGTTGCAATAAAGGTGCTGAGACCTGATAGTTTACAGGGACAATCACAGTTCGAACAAGAGGTAATTAGTGTACCCTTTTAAAATTTGTTTGTTATCTTTGTCATTCTGGAAAAGGGAGTTGATCTCTGGCTCCTCTCTAGTTCAAAATGAGAAGTAGAAATTGAGTGGCTTCTTTTGGATTCTCTTGCAGGTTTCTATCCTCAGTAGAGTGAGACACCCTCACCTTGTGACTCTCTTAGGAGCTTGCTCAGAGTCTTCAACACTCGTATACGAGTTCCTGCCAAATGGAAGCCTAGAAGATTTTCTTATGTGTTCAGATAAGAGGCAAACTCTGACGTGGCAGGCTCGGATTCGAATTATTGCTGAGATATGTTCAGCACTAATCTTTCTGCATAAGAATAAACCTCACCCAGTTGTTCATGGAGATCTCAAGCCTGCTAACATTCTCCTTGGTGTTAACTTAGTCAGTAAGCTTAGTGACTTCGGTATTTCTCGCCTCCTAATCCAGTCCAGCACCAATAACACCACCCTGTACCGCACCATGCATCCTGTGGGCACCCCTCTGTACATGGACCCAGAATTTCTTTCCACTGGAGAGTTGACACCTCAGTCTGATGTTTATTCATTTGGTATTGTAGTCTTGCGTCTTTTAACAGGAAAGCCTCCTGTTGGTATAAAGAAGATCGTGGAGGATGCAATGGAGAAAGGTGACTTGAACTCAGTAATTGATACCTCAGTGGGAGAGTGGCCTCATCTGCACATCGAGCAGCTGGCATACCTTGCTCTCAGATGCACTGAGTTAAGCAGGAGGTGCCGCCCTGATCTTTCAGGTGAGGTGTGGGCAATAGTTGAGGCTATAAGGGATGCTGCATTATCTTCACCTTCATCCTCTAGATCAGCACAGGATCAAAACAGTCCACCGTCATATTTCATCTGTCCTATATCTCAGGTAAGTAGAAAACAATCACCAGATTTTTCCCCTTGTTCTGGCACATGTGAATGGAATAGCTAGAAAATAATACTGAAGAAGTGCAAATCTATGGTAAAAACCAAATGTGTTACTTCTTTGTTTTGCTGAAAAATGCTGCCTTCTAGTTTTTGCTTGATGACTGATCATCACCTTATTACCTACCATGGTCACAATTTCAGGATATCATGGATGATCCTCACATTGCAGCAGATGGATTCACCTATGAAGCTGAGGCAATCAGGAGTTGGCTCTGCAATGGCCATGACACGTCTCCAATGACCAACTTGCTACTTGAACATGAGGAGCTCATTCCGAATCGCGCACTGCGTTCTGCTATTCAGGAGTGGCTCCAGCAGCACAGCATGTCGCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021847

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA021847&oldid=44372"