BGIOSGA021897

From RiceWiki
Revision as of 13:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021897| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021897, complete gene.| tag = OsI_216...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021897

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021897, complete gene.

LocusTag

OsI_21699

Ensembl Transcript ID

BGIOSGA021897-TA

Ensembl Protein ID

BGIOSGA021897-PA

Length

4615

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3190600..3195214

Sequence Coding Region

3195002..3195214,3194753..3194815),complement(3194598..3194642,3193744..3193822),complement(3193491..3193619
,3192899..3192977),complement(3192699..3192747,3192147..3192253),complement(3191971..3192040
,3191287..3191369),complement(3190600..3190630

Genome Context

<gbrowseImage1> name=IndicaChromosome06:3190600..3195214 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:3190600..3195214 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCCTCTCCCACCACCTCCCCCCGCCGCCGGGAGACCCCTACTACGTGTACGCGCCGCACCCCTACCCAGATACGCAGCGGCAGGGGGTCCTCACGCTCTTCGTCGCCGGTCTCCCTGACGACGTGAAGCCCCGGGAGATCCACAAACTCTTCTCCAGCCGCCCCGGCTTCGACCACTGCCTCTTGGAGTACACCGGCCGGGGGAACCAGGTGGTGGCCTTCGTGTCATTCGTTAATCATCAGGCGGCTCTTTCGGCAATGTCTGCTTTAAATTATGTAATCCCTGGCGTCAAGTATCCCGACCACAGGGAGTACTCTGGGACTGTATTTGATCCAGATACTGGAGACCGTTTGCACATTGAGCTAGCTAAATCGAGTTCACGTAAACGTCATGGAGATGGTGGGGTTTATAGAGTTGTTGACAAACGACTTAAGAGAAAAGAAAGAGCTGCTGACCATGAGAATGCTGGTGATGGAGGTAATGATGATGATGCATGGGGCGAGGATGATAATGGTGGTAATGATGGAGATGGTGGATCCGATGAGCCATTGGACACAGAAAATGATGATTCCGACGAAAAGAATGAATTACCTGCAGAACGGAGTAGTGGTCAACCAGGGCTTAAGCAGCATAGGGGGCAATCTCTTTCAGATGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGTTCTACTTTATTTGTTGCAAATTTGGGTCACTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTAAGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATGCCAGTAGCTTTTGCTGATTTTACGGATATCGAGTCCTCTACGGCTGCTATGGATGCTCTACAGGGCACTGTGCTAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTACGCAAGGTCAAAAATGAGGAAAAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MSLSHHLPPPPGDPYYVYAPHPYPDTQRQGVLTLFVAGLPDDVKPREIHKLFSSRPGFDHCLLEYTGRGNQVVAFVSFVNHQAALSAMSALNYVIPGVKYPDHREYSGTVFDPDTGDRLHIELAKSSSRKRHGDGGVYRVVDKRLKRKERAADHENAGDGGNDDDAWGEDDNGGNDGDGGSDEPLDTENDDSDEKNELPAERSSGQPGLKQHRGQSLSDDQPDKLSSDIPPCSTLFVANLGHSCTEEELKEVLSKQPGFHLLKMRRRGGMPVAFADFTDIESSTAAMDALQGTVLASSDADGLQIEYARSKMRKS</aaseq>

Gene Sequence

<dnaseqindica>1..213#400..462#573..617#1393..1471#1596..1724#2238..2316#2468..2516#2962..3068#3175..3244#3846..3928#4585..4615#ATGAGCCTCTCCCACCACCTCCCCCCGCCGCCGGGAGACCCCTACTACGTGTACGCGCCGCACCCCTACCCAGATACGCAGCGGCAGGGGGTCCTCACGCTCTTCGTCGCCGGTCTCCCTGACGACGTGAAGCCCCGGGAGATCCACAAACTCTTCTCCAGCCGCCCCGGCTTCGACCACTGCCTCTTGGAGTACACCGGCCGGGGGAACCAGGTCCCCCACTTCCCCTGTCTCACTTCAATCTCAAGCTTCACGCTGTCGAAACCTCGGCATCGTGGCTGTAGAAGTAGAACCCTTCGGTTCATCTAGAAATTGGTAGTATTGGATTTTGTAGTGGATCACAATCCAGGTTTCTGTTTGCCCCGATGCTATTCCTGAATTCTGGTTCTTGTGCTGCAGGTGGTGGCCTTCGTGTCATTCGTTAATCATCAGGCGGCTCTTTCGGCAATGTCTGCTTTAAATGTGAGTTATGATGTTGAACATCTTATGGAAGAACCAATTTCCACCATCCTTTGCTGCGTGACCTGGAATCCTTTCCCTCTTTTATCTTTTCAACTTCATATTTGTTAAAGTATGTAATCCCTGGCGTCAAGTATCCCGACCACAGGGAGTACTCTGTAAGCCTTACAGCTTCATAATTATAGTACTAACAAAGTGAAGCTGGTATTCTTCGCTTCTTCAGTATTGTTAAGACCTTCTTTTTGCCTGGTAGAGTTATTACTCAGTGTGCTAATGCTGAATTTAGACAAACCATCATCTCTAGTTTGCTTCGTTATTTCATACTACCTCTGTTTCAGGTTATAAGACTTTCTAGCATTGCTCACATTCATATATATGTTAATGAATCTAGACATATGTGTGTCTAGATTCATTAACATCAATATGAATGTGGGCAATGCTAGAAAGTTTTATAACCTGAAACGGAGGAAGTATTATATAAACATGACATGTGAACTAAATTAATTAGAAGTTTGAAGATTGAAGTGTACATATCCATGACTTCAGCATATGTATTACATGTTAGAAATTTAAGCTTACCAATGAGGTGGAAAATGGAATGTTCGTATAACATATTGTTAATTGTAGAAGGTGCCTAATTCACATCCATAGGTTGAAATTTGATGCTGACATAATGTATGCATAACTCTCTGATATTCTCTTTCTCCATGCAAATTGTAAGACAAAATTAATCTTGCTTTGTTACATGGAACTTACCAACCCTGCATTTACATAAATATTAACTAAAAGAATTTCCATGTGTTACCTTTACTCGTACCGCAGTTCCGTGCACCTCCTGACTTGTATATTTTCAATTTCTAACTTACTAGCTGCATTTATTTAGGGCTGTTGGCTTCTTATCAATCTAACCGATCAAATATTTGTCCATTTCAGGGGACTGTATTTGATCCAGATACTGGAGACCGTTTGCACATTGAGCTAGCTAAATCGAGTTCACGTAAACGTCATGGAGGTGTAATTTAGACACTAGCACTAATTTTCTTATTCCTATCAGAATTCTTCGTGCACTTAGCTCTGCCTCATGTTAATATGTTATTGGACATCGTTCTATTTACACAATTGCAATTTCATGCTAGATGGTGGGGTTTATAGAGTTGTTGACAAACGACTTAAGAGAAAAGAAAGAGCTGCTGACCATGAGAATGCTGGTGATGGAGGTAATGATGATGATGCATGGGGCGAGGATGATAATGGTGGTAATGATGGTAATGGTCATTCTCTTACACTTGGATGTTATCCATAACCATCACACCGTCACTTGTCTTTTGTTAGATGGACTTATATGACATATGTGGTGCAACGCTTTAATTTGATGCTAAAATGTTACTTTGGTAAGACCATCAAATTAATATGAAAACTGATAATGAGCTTTTGTTTGTCCTTGTCTTTTATTTTTGTCTTGTTACATCCCATTTTTATTTCTCAGGGCACAGTTTCAATTTGGATTTTGGACAAACATTTTGATTGTAGATGACTCGAGAGCAACATATTACCTTTATAAAGATTTGTTTTCCCAAATTGAATACATTCTGTGACTAAAAAGAGTTAGCGTGCTTATATCAAATTTAGATTTTGCATTAGACGTGTGTCTTGTGCTGAAGTATTAACTTTTGCATAGATGTGTAGCTAAAAATAGCACAGTATAGATATAGTTTTCAAGGTTTAATAAAACAGATTATAAAACTCATTGTGCATTTAAGTTGACACCAAACATTCAGGAGATGGTGGATCCGATGAGCCATTGGACACAGAAAATGATGATTCCGACGAAAAGAATGAATTACCTGCAGAACGGAGGTTGAAATTCACTTCACATCATACTTAGCTGGATATAATGTATATGTTTTACTTTAGCATATCATTCTAGTAAAAACTATAGGACATTGCTGATGTGCTTCCTTATTGTTAGTGGTTGTCATTGATGACTGGTGCTTCCTTTCGTGCACAGTAGTGGTCAACCAGGGCTTAAGCAGCATAGGGGGCAATCTCTTTCAGATGTGAGTTTCCTGTCACAATTTCGCTTCATCACACTTTTAGTTTACGACATTGTTATGTACACTGCTGTTAGCAATTGTGCATGAGTTTATAGCTTGAGTCAATGTTCTCTGCAGCATATGCTTGTGTATAAGCACATACTCTGTTTTGTGTTATAGTTATTACTTATTAGAACAGGTCTGCCAATCAAACTAGTCTTGCAATGCAGATTTATGCATGCCAGCATGAACTATCTAGCAGTTATATTTGTTTATTAACCAACCTGAGAAATGTTGGATCTTTGCAGACTGGCTTATTTCAAACTTGTGTTTCTTATTTTGAATACCCATGTCATAGAGTATGCACAGTGGCAGCTCTTGGGCTCAGTTAGAGGGGTCACACCACCCCTGTGCAAGTATTCCTTGAAATGCTTTAGTCTGCATATGAATTATGATTTTGTTTGTGCAGGATCAACCAGACAAATTGTCAAGTGATATTCCACCTTGTTCTACTTTATTTGTTGCAAATTTGGGTCACTCATGCACAGAGGAAGAGCTAAAGGAAGTTTTATCTAAGTATGTTTCCTGAATTCTGCTAGTGTGCTTGCTAAAATGGAATGTTCGATGAAGAAACCATTGCTTATTATTTTTTTTAAGAAGTGCCATTGCTTATTATTGACAGGCAACCTGGATTTCATTTGCTTAAAATGCGCCGTCGTGGTGGAATGCCAGTAGCTTTTGCTGATTTTACGGTATACCTACCTTTATTGTTTTTAATTAGTAATCATGCCTGCTCTTATGAGATGCTCTAGCTTCCCTGTGTAGTGTTCATATAATGGACCAGTTAACTAGAGTAAATACATATATATGGTTTTCTTGCTCTATTTTTCCCCTCATTGTTTTTTCAGCTGTGTGTTTGACCCGTTTTGTTCACAACTTCACATTATCGTTGGAGATTGACATCCACAAGTCCATGTCGAGATATCACTGTTCACCACCAAAATAACTAGTATGATGACCGTATTTAACTTTATTTACGGGCAGCTTATGAGCAAATGCTGGCTAGCTCTGTCCAGTTAATGCTGACAACTTTGCAATTGTTAAGATATATGACAAATTAGGCCAAAATGGAGGCTCTATTACATTACGAAGAACCATAATCTAGAGGGCTGAAAATAAAAATCATGAAAGTTTGTTTAGTAATTTGAACCACTGATGGAACGGAAGACCCCACTTTTTTTAATCAGTTTTGACTACCTGCTAATACATGATAATGAAATTTCTGAAGATCATGTAGTATGGCCAAATGTTTTTTTTACCCTAAATAAATGAAGAGAAACTTGCAATATGCAGGATATCGAGTCCTCTACGGCTGCTATGGATGCTCTACAGGGCACTGTGCTAGCTTCTTCTGACGCTGACGGCTTGCAGATTGAGTATCCTTACTGTCCAACACGGCACTTGCTTTTTAGTGCATCGTTTTTGCTCATTTCTTTTGTTTATCGTATATCCATATACTCCATCCTGCATTGCACTATTGTTTCTCTCCTTTTGGTCTGAGCAGATTTGACCTTCGCAGCGTTCGTTTATAATGTTTACCTTGCTGGGTTAGACTTAGGCCTAAGTTGGCTCATTTTGCATTTCTCGTGAAGCAATAAGCACCTGTTGATGTTGACAACCCAACAACATAAGTTTTTACATTGCGATGCTAAGCCGTTGATGAAGTTAGAACTATTGTTTATATAGATGTGTTCGTAGTGAGAAACTTAGGCTGTGTTCTTCCCCCAGTTTTTCCAACTCACCTCTCTCGTTTTCCGCGCGCACACTTTTCAAATTGCTAAACGGTGTGTTTTTTTGCAAAAAATTTCTATACGTAAGTTTTAAAAAAAATCATATTAATCCATTTTTTTTAAAAAATAGTTAATATTTAATTAATCATGCAATAATACGCCAGCCTAGTTGGTTACTTGTGATATATTATGTACTTCAACCCAGCAATTTGTGTTATCTGGGAAGTGGAAGCCACGCTTAAGTCATAACTGCAGTACATCACTGTTAAAAGGATCCTTGTTTCCTTTAACTCCAGCTGCAGGTACGCAAGGTCAAAAATGAGGAAAAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021897