BGIOSGA021946

From RiceWiki
Revision as of 13:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021946| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021946, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA021946

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021946, complete gene.

LocusTag

OSJNBA0007O20.4

Ensembl Transcript ID

BGIOSGA021946-TA

Ensembl Protein ID

BGIOSGA021946-PA

Length

5665

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2454552..2460216

Sequence Coding Region

2459827..2460216,2459685..2459733),complement(2459401..2459608,2459053..2459290),complement(2456923..2457030
,2456690..2456806),complement(2456461..2456587,2455239..2455802),complement(2454823..2454899
,2454552..2454689

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2454552..2460216 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2454552..2460216 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTGTCAACAACAAGGTGGACAGCCTCTCCTACGACGTCGAGGCGCCACCGGCGCAGGCGCCGACGACCCCGGCGGTGGTCTCCGCGCCGCCGACGCCGCGGGGCGAGGCGCCGGCGATGACGACGACGGCGGCGGTGGAGCTGCACAAGGTGTCGGTGCCGGAGAGGAGGTCGACGGCGAAGGCGCTGAGGCAGCGGCTGGCGGAGGTGTTCTTCCCCGACGACCCGCTCCACCAGTTCAAGAACCAGTCGTCCGCGCGGCGGCTGGTGCTCGCGCTGCAGTACTTCTTCCCCATCTTCCATTGGGGCTCCGACTACAGCCTCCGTCTCCTCCGCTCCGACGTCGTCTCCGGCCTCACCATTGCCAGCCTCGCCATCCCTCAGGCAGGAATCAGCTACGCCAAGCTCGCCAACCTGCCTCCAATCATTGGACTATATTCGAGCTTCGTGCCGCCGCTGATCTACTCGTTGTTGGGTAGCTCGCGGGATCTGGCTGTAGGGCCGGTGTCGATAGCGTCGCTGGTGATGGGGTCGATGCTCCGGCAGGCGGTGTCGCCGGACCAGGAGCCCATCCTCTACCTCCAGCTCGCCTTCACCTCCACCTTCTTCGCCGGCGTCTTCCAAGCCTCCCTCGGCTTCCTCCGGCTGGGGTTCATCGTGGATTTCTTGTCGAAGGCGACGCTGACGGGATTCATGGGCGGCGCGGCGATCATCGTGTCGCTGCAGCAGCTCAAGGGATTGCTCGGGATCATCCATTTCACGTCGCAGATGGGGTTCGTCCAGGTGATGCACTCCGTCTTCAAGCACCACGACGAGTGGGCGTGGCAGACCATCCTCATGGGCGTCGCCTTCCTCGCCGTCCTCCTCACCACACGCCACATCAGCGCCAGGAACCCAAAGCTTTTCTGGGTGTCAGCAGCTGCTCCACTGACATCAGTGATCATCTCTACCATCATCTCGTTCGTCAGCAAAGCTCATGGCATCAGTGTTATTGGCGATCTCCCCAAGGGATTGAACCCTCCTTCAGCGAATATGCTGACCTTCAGTGGCTCCTACGTAGGACTGGCCTTAAACACAGGAATTATGACTGGCATACTGTCTCTCACTGAAGGGATAGCAGTAGGCAGGACATTTGCATCCATCAACAACTACCAGGTTGATGGAAACAAGGAGATGATGGCCATTGGTGTCATGAACATGGCTGGCTCATGTGCCTCCTGCTATGTCACCACAGGATCGTTCTCGAGGTCGGCGGTGAACTACAGCGCGGGGTGCAAGACGGCGGTGTCGAACATCGTGATGGCGTCGGCGGTGCTGGTGACGCTGCTGTTCCTGATGCCGCTGTTCCACTACACCCCCAACGTGATCCTCTCGGCGATCATCATCACCGCCGTGATCGGCCTCATCGACGTCCGGGGCGCCGCCAGGCTGTGGAAGGTCGACAAGCTCGACTTCCTCGCCTGCATGGCCGCCTTCCTCGGCGTCCTCCTCGTCTCCGTCCAGATGGGCCTCGCCATCGCCGTCGGCATCTCCCTCTTCAAGATCCTCCTCCAGGTCACCCGCCCAAACATGGTGGTCAAGGGCGTCGTCCCCGGCACGGCGAGCTACCGGAGCATGGCGCAGTACAGGGAGGCCATGCGTGTGCCGTCCTTCCTCGTCGTCGGCGTCGAGTCCGCCATCTACTTCGCCAACTCCATGTACCTCGGCGAGAGGATCATGAGGTTTCTCCGGGAGGAAGACGAGCGGGCCGCCAAGTGCAACCAGTGCCCTGTCAGATGCATCATCCTCGACATGAGTGCTGTTGCAGCGATCGACACGAGTGGCCTCGATGCACTTGCAGAGCTGAAGAAGGTGCTGGAAAAAAGAAACATCGAGCTTGTCCTGGCCAACCCGGTTGGATCGGTGACCGAGAGGCTGTACAACTCGGTGGTCGGCAAGACGTTCGGCTCAGACCGCGTGTTCTTCAGCGTCGCCGAGGCCGTCGCGGCGGCGCCGCACAAAACACAGCCCTGA</cdnaseq>

Protein Sequence

<aaseq>MVVNNKVDSLSYDVEAPPAQAPTTPAVVSAPPTPRGEAPAMTTTAAVELHKVSVPERRSTAKALRQRLAEVFFPDDPLHQFKNQSSARRLVLALQYFFPIFHWGSDYSLRLLRSDVVSGLTIASLAIPQAGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRDLAVGPVSIASLVMGSMLRQAVSPDQEPILYLQLAFTSTFFAGVFQASLGFLRLGFIVDFLSKATLTGFMGGAAIIVSLQQLKGLLGIIHFTSQMGFVQVMHSVFKHHDEWAWQTILMGVAFLAVLLTTRHISARNPKLFWVSAAAPLTSVIISTIISFVSKAHGISVIGDLPKGLNPPSANMLTFSGSYVGLALNTGIMTGILSLTEGIAVGRTFASINNYQVDGNKEMMAIGVMNMAGSCASCYVTTGSFSRSAVNYSAGCKTAVSNIVMASAVLVTLLFLMPLFHYTPNVILSAIIITAVIGLIDVRGAARLWKVDKLDFLACMAAFLGVLLVSVQMGLAIAVGISLFKILLQVTRPNMVVKGVVPGTASYRSMAQYREAMRVPSFLVVGVESAIYFANSMYLGERIMRFLREEDERAAKCNQCPVRCIILDMSAVAAIDTSGLDALAELKKVLEKRNIELVLANPVGSVTERLYNSVVGKTFGSDRVFFSVAEAVAAAPHKTQP</aaseq>

Gene Sequence

<dnaseqindica>1..390#484..532#609..816#927..1164#3187..3294#3411..3527#3630..3756#4415..4978#5318..5394#5528..5665#ATGGTTGTCAACAACAAGGTGGACAGCCTCTCCTACGACGTCGAGGCGCCACCGGCGCAGGCGCCGACGACCCCGGCGGTGGTCTCCGCGCCGCCGACGCCGCGGGGCGAGGCGCCGGCGATGACGACGACGGCGGCGGTGGAGCTGCACAAGGTGTCGGTGCCGGAGAGGAGGTCGACGGCGAAGGCGCTGAGGCAGCGGCTGGCGGAGGTGTTCTTCCCCGACGACCCGCTCCACCAGTTCAAGAACCAGTCGTCCGCGCGGCGGCTGGTGCTCGCGCTGCAGTACTTCTTCCCCATCTTCCATTGGGGCTCCGACTACAGCCTCCGTCTCCTCCGCTCCGACGTCGTCTCCGGCCTCACCATTGCCAGCCTCGCCATCCCTCAGGCACGCACGCGCAACCTGATCACACATACACGTCATTGTTTTGCCTCCTGAAATTCTCCATTCCCAATTCCAATTCGAATTCCGATTTCTTTGCAGGGAATCAGCTACGCCAAGCTCGCCAACCTGCCTCCAATCATTGGACTATGTAAGTAAAAGATGAACCAAAATGACCGGCCATTATGTCAATTCGATGTGATGAATAACACATATGATGTATGCAGATTCGAGCTTCGTGCCGCCGCTGATCTACTCGTTGTTGGGTAGCTCGCGGGATCTGGCTGTAGGGCCGGTGTCGATAGCGTCGCTGGTGATGGGGTCGATGCTCCGGCAGGCGGTGTCGCCGGACCAGGAGCCCATCCTCTACCTCCAGCTCGCCTTCACCTCCACCTTCTTCGCCGGCGTCTTCCAAGCCTCCCTCGGCTTCCTCCGGTATTCGATCACTTCACATCCATCATCTACTGTTCCATTGACGATGGATCGATGGATCGATCACCTCATGCCTAGCTAACTGATGGAGTATATCGTGTTCTTGGTTTTAGGCTGGGGTTCATCGTGGATTTCTTGTCGAAGGCGACGCTGACGGGATTCATGGGCGGCGCGGCGATCATCGTGTCGCTGCAGCAGCTCAAGGGATTGCTCGGGATCATCCATTTCACGTCGCAGATGGGGTTCGTCCAGGTGATGCACTCCGTCTTCAAGCACCACGACGAGTGGGCGTGGCAGACCATCCTCATGGGCGTCGCCTTCCTCGCCGTCCTCCTCACCACACGCCACATCGTAAGCTAATAGCTACCACACCTTCCTAGTAGCGTATCACCTGCAGAGATGATGCATGCTCTCTTGATTGATTAGTTAATTATTGCCTGTTCTTCGCTAATCGCGTGGTGATTAGAAGGTAATCAGGGGGTTAATTGCTATTACTATTTATAGAAAGTTCCGCAGAAATGGCTAGGCGCCAAAATAGTAAGGGAACCACAATTAATAGCCACACGTATGAAATGCGTGGGGATCAAGGATGCAAGCATGTCGACCCATGAACCTGCGTACAGGTTATTTAAATGTTGCGCCTAATAGAACAATCCAGATATTTAGTGATTCACAAGTAAAGTGATTTTATAGTTCTTGAGAAGGTACTAGAAGATACCATATTTTTTAGTGTAAAATTTGATACATCTTGATATCTTCGATACTAATAGATACCAAAATTTACACTAAAATAATCGATACCTCTTGGTATCTCTCAAGGATCGTAAAAGCTGGCTTGCCTTGCCTGTATAAGTAAAAATGTAATGAGACCTGCCGTTGTAAATTCTGAGACAATGGAAGAGTACAGAACACTTTCGGCTAGGGGCAGTTATGAGCAGGACTAAATGGTTATTGTTAGTTAATTAGTCGGCAAAATTCTTTATAATTATTTGACCATGGTTAAAGACAGGTAGCTTATCTATAGCTAGGAAAGATAGTATGGCAAAAAGGAAAGGTGGTGATTAAAACCATTACAAAGTGAGCTTCATGGAGGGGCCCAAAGGGTGCTTGCCACTAACAAGGAATTTGACTCCACTCAGTTAAACTAATGGCCAATAGTTAATGGAAGGTGAAGTTAAGCTACCTCCAGCTTATAGGGATCTCATAATGATGGGATATTTTGATTTTTCCTAAAGGAATTCCATTCACATAATTGATTGTCGCGAAATTCGAATATCTTACTTTAGTAGTTGGGTGGTTTTCTTAATTAGGGGATCACATAAAAGTTCCTCAATTTTTTCAAACTGTTTAAACTTATTTAAGCTAGTATAGTACTACTTTAGGGTAATCTAAAAACTTCTTTAGACTTGCTTAATAAACAGTTGCTATGCCAAGAAAAAGTCATGTCTTATGCCTAATCTTCCAAGATATCTGAACGTTGGACTAACACATGTGGTGTCTAAAAAGTTAGTGTTGGCGTGTGACCAGAAGTATTTAAGGTTGTTAATTGCATAATTGTGAAAGGAGTTTATAATAATATTTACTCCCCTTACACTTGCAGAAAAGCACTAATTCTTTTAGTAATTAATTAATCGATCATGTGTACAAAAACATATGTCATGAAGCACTCTAACTAGTATGATGAGCAGTTCTAGTTTGGATGATCTCACAAACTAAACAAAAACAAAGAATGTTTATATCTTGCATTAGTCTTAATACGATTAGACCATATACATCAATTAAAGCAAGGCGTGTGTGTGGCTTTAGAATATATTCTAATAAAGCCATTTTCAATTGGAACATTTCTCTTTTCCCTTTTGGGAAGAATGGATCTGGTTTGGCCACTCTGACGTGTCACCTGTTAAGCTGGTTGTTCACATGCTCATCTCTCTGAATTTCGGTGTCTTTTCAGTCTAAACAGAATGATCTGATAAACACATCCATTAGACTGTTAATGGTTTTCCTCTGAGAAAAGTAAGTCATCTGCTTTGTAATGACGCTGTTCCTCACCTGGAATGATTAAAAAGTGTCAATTAATGCGACAATTCCACGGTCATGGGACCATCTCAGAACAAATCTTCAGAAGATGTGAGGAGATGGGGCCTGCCAAATTAATAGGTTTTAACCAGAACTTCTTTTCATTTGTGATTCAAGATCTACTGAACTCTTTTTATAAAAATTAAAAAAAAATATGTACTTAATTCATTATGTGAACCGCTGTTGTGGTTGCCAATAATTTTTTTACCTTCTGATTCTTCAGTTCGCTGTATACAATTTTCTCTGACTTTTGATGCGAGTATGCAGCCGGTAACAATTTTCACTGTATTTTTGCAGAGCGCCAGGAACCCAAAGCTTTTCTGGGTGTCAGCAGCTGCTCCACTGACATCAGTGATCATCTCTACCATCATCTCGTTCGTCAGCAAAGCTCATGGCATCAGTGTTGTGAGTAGCTTCTCTAAACCATTTCTGAATCTTTCATGGACAGCTTCACATCGAGAACATGAAAGAAACGTCATTAGTCACACTAATTCATCTTTTTTTGGGTGGTGTTTGGACAGATTGGCGATCTCCCCAAGGGATTGAACCCTCCTTCAGCGAATATGCTGACCTTCAGTGGCTCCTACGTAGGACTGGCCTTAAACACAGGAATTATGACTGGCATACTGTCTCTCACTGTAAGGCACCTACATAAAAAACACATTTTATTTACTATCTGAACTATTTTAGTATGGTGATGTTTAGTCTGAACATGAAAGGAAAAATGACTGAATTTGCAGGAAGGGATAGCAGTAGGCAGGACATTTGCATCCATCAACAACTACCAGGTTGATGGAAACAAGGAGATGATGGCCATTGGTGTCATGAACATGGCTGGCTCATGTGCCTCCTGCTATGTCACCACAGGTTGGTTTGTCAGTTGCACCATAGCTTCTGAACGTATTAAGTACTTGTCGTTTTAGATAAAATTAGATCAAACCTTTAAAATTCTGACCATCAGTAATTTCTTAAATGCATAGTTCAAAACCAAAACAAACGATATAGTATATAGATTTGCCTCGAAAAGTAATTATCATAGTATTATAAAATGTTTATATTTTATAAATTTACTCTAACATAAAATTAGCTGTCAAAATTTCAAAAGTTTAACCAAATCTTATACGATAAGTATCTTTTGACCGGAGGTACTCTAACTTGTTCAAGTTTGTTTAAGTTTACAGAAAATTTTAACAATATTTTTAATATAAAATAAATATGTTATCAAAATATATTCAACGTTACATTCAATGAAACTAATTAATTCAATATTATAGAAAAAGATTGACTAAGAAAAAATCAAAACGACTTATAATATGAACGGAATGAGGGAGTAATATTCATATTTAGATAGTGGAAATGGATTATATCTCCGGCTTCTGTCATGAGATGCACAACAAAAAAAAGACAAAGATAAAAATAAATCAAAATGAGAAATAAGATGATGTGAGTAATATTCATGGAAGCTAGATGAGGATCGCAATGGCTCACCATTGGCAAAAAAAAAACTCTGAATGAATGGACGCAGGATCGTTCTCGAGGTCGGCGGTGAACTACAGCGCGGGGTGCAAGACGGCGGTGTCGAACATCGTGATGGCGTCGGCGGTGCTGGTGACGCTGCTGTTCCTGATGCCGCTGTTCCACTACACCCCCAACGTGATCCTCTCGGCGATCATCATCACCGCCGTGATCGGCCTCATCGACGTCCGGGGCGCCGCCAGGCTGTGGAAGGTCGACAAGCTCGACTTCCTCGCCTGCATGGCCGCCTTCCTCGGCGTCCTCCTCGTCTCCGTCCAGATGGGCCTCGCCATCGCCGTCGGCATCTCCCTCTTCAAGATCCTCCTCCAGGTCACCCGCCCAAACATGGTGGTCAAGGGCGTCGTCCCCGGCACGGCGAGCTACCGGAGCATGGCGCAGTACAGGGAGGCCATGCGTGTGCCGTCCTTCCTCGTCGTCGGCGTCGAGTCCGCCATCTACTTCGCCAACTCCATGTACCTCGGCGAGAGGATCATGAGGTTTCTCCGGGAGGAAGACGAGCGGGCCGCCAAGTGCAACCAGTGCCCTGTCAGATGCATCATCCTCGACATGAGTGGTAATAAGCTCTTGCATGCTACTACTCCTGTACAGAATTCATACTCAGTTAAAAAAATGCTGAAAAGAGTGGTTAATTATTCAGTAAATTAAAACTGACATGGATCGATGAGCTAATTATTCATTCAGTACAACGTTCTCAGAAAAATTGTAGTACAATCTTGATCAGTAAAAAGATTCTCAGTAAAAAGAGTTGTTAATTATTCAGTAAAAACTCACATGGATCGATGAGCTAACTGTTCAGTAAAAAGAGCAGCTAATTATTCAGTATAACATTCTCAGAATAATAGTACTATCTTGTGATCAGTACAAACTGACAGAGAATTCGATGAACTTGCAGCTGTTGCAGCGATCGACACGAGTGGCCTCGATGCACTTGCAGAGCTGAAGAAGGTGCTGGAAAAAAGAAACATCGAGGTAATAGAACTTCTGAAACATCTATCTACCAATGTTCTTCTTGTCAGTTTCAGTGATTTACTATCAGATAATATTCAGATTTGTCAGTGACAGTGAATAGTAACATGAGCTAATTTCTGACGGATTTCTGCAGCTTGTCCTGGCCAACCCGGTTGGATCGGTGACCGAGAGGCTGTACAACTCGGTGGTCGGCAAGACGTTCGGCTCAGACCGCGTGTTCTTCAGCGTCGCCGAGGCCGTCGCGGCGGCGCCGCACAAAACACAGCCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021946

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA021946&oldid=44471"