BGIOSGA021976

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Revision as of 13:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021976| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021976, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA021976

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021976, complete gene.

LocusTag

OSJNBA0041F13.6-1

Ensembl Transcript ID

BGIOSGA021976-TA

Ensembl Protein ID

BGIOSGA021976-PA

Length

5168

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2174036..2179203

Sequence Coding Region

2178949..2179203,2178759..2178839),complement(2177649..2177744,2177412..2177495),complement(2177261..2177330
,2177099..2177181),complement(2175189..2175268,2174960..2175058),complement(2174565..2174670
,2174170..2174259),complement(2174036..2174074

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2174036..2179203 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2174036..2179203 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAAGGAGAGGAAGCGGAGGCAGCCCGCCGACGCGCCGCCGCCGGGGGACGACGACGAGGGGAGGGACCACCGGAGGGAGAAGAAGCCGAGGAAGGAGAGGCCCGACCCGGTGCTGCCGTCGCAGATCAAGAACAAGGACAAGCGCAAGGAGGTGCACGCGAAGCTCAAGCGCGAGAAGAAGGCCCAGAAGCGCAAGCTCGCCCGCGAGCGCGGCCAGGCCGCGCAGCGCGCCGTCGAGCTCGGCGAGCAGCCGCCGGAGAAGCTGGTGCCGCGGACGATCGAGAACACCAGGGAACCTGACGAGACCGTGTGCCGGCCCGACGACCAAGAGCTGTTTGCAGGGAATGATGCTGATGAATTCAATGCAGTTCTGAAGCAGCAAACAACTCCAAAAGTGTTGATTACCACATGTCGCTTCAATTCAGGCAGGGGACCTGCCTTTATTGAGGAGTTAATGCAAGTGATACCCAATTCGTGTTATGTTAAAAGAGGAACTTATGAACTCAAGAAAATTGTGGAATATGCAAATAACAGAGATTTCACTTCACTTGTTGTTGTCCACACAAACCGAAGGGAACCTGATGCTCTACTGATCATCAATTTACCTGCTGGTCCTACTGCACATTTTAAACTATCTAAACTTATTCTGCGGAAGGACATAAAGAACCACGGCAACCCCACAAGTCATAAGCCAGAGTTAGTGTTGAACAATTTCACTACGCGCCTTGGTCATCGTGTTGGAAGGATGATACAATCTCTTTTCCCTCAAGAACCCAATTTCCGTGGTCGGCGAGTTGTGACCTTCCATAATCAGAGAGACTATATTTTTTTCCGTCATCACAGGTACATCTTTGAGATGAAAGAAAACAAAATTGCTTCAAAGGACAAGAAAGCTAAGACTTCTGAAAGCAAAAGCCAACCTGAGAAGCAAGTAATTTGTCGCCTCCAGGAATGTGGTCCTCGCTTCACCCTCAAGCTGCTCACCTTACAACATGGGACCTTTGACACAAAAAATGGGGAGTATGAATGGGTTCACAAGCCGGACATGGACACGAGCAGAAGAAGATTTTTCTTGTAA</cdnaseq>

Protein Sequence

<aaseq>MAKERKRRQPADAPPPGDDDEGRDHRREKKPRKERPDPVLPSQIKNKDKRKEVHAKLKREKKAQKRKLARERGQAAQRAVELGEQPPEKLVPRTIENTREPDETVCRPDDQELFAGNDADEFNAVLKQQTTPKVLITTCRFNSGRGPAFIEELMQVIPNSCYVKRGTYELKKIVEYANNRDFTSLVVVHTNRREPDALLIINLPAGPTAHFKLSKLILRKDIKNHGNPTSHKPELVLNNFTTRLGHRVGRMIQSLFPQEPNFRGRRVVTFHNQRDYIFFRHHRYIFEMKENKIASKDKKAKTSESKSQPEKQVICRLQECGPRFTLKLLTLQHGTFDTKNGEYEWVHKPDMDTSRRRFFL</aaseq>

Gene Sequence

<dnaseqindica>1..255#365..445#1460..1555#1709..1792#1874..1943#2023..2105#3936..4015#4146..4244#4534..4639#4945..5034#5130..5168#ATGGCGAAGGAGAGGAAGCGGAGGCAGCCCGCCGACGCGCCGCCGCCGGGGGACGACGACGAGGGGAGGGACCACCGGAGGGAGAAGAAGCCGAGGAAGGAGAGGCCCGACCCGGTGCTGCCGTCGCAGATCAAGAACAAGGACAAGCGCAAGGAGGTGCACGCGAAGCTCAAGCGCGAGAAGAAGGCCCAGAAGCGCAAGCTCGCCCGCGAGCGCGGCCAGGCCGCGCAGCGCGCCGTCGAGCTCGGCGAGCAGGCAAGCGCGCGCCTCGATTTCTCCCCTCCGCAGCGAGCTCCCCCTCTCGAATTCCTCCAAGCTTTGTTTCTTAGGTTTTTCTGATGGTTTTCATTTTGGGTGTTCGCAGCCGCCGGAGAAGCTGGTGCCGCGGACGATCGAGAACACCAGGGAACCTGACGAGACCGTGTGCCGGCCCGACGACCAAGAGGTTTGTGCACGTTCTTCTGTGTTTCTTACTTGGATTGATCCTACCAATGCGAGTTTCTCAATTATCGGAGTAATTGTAATTTTAATTTCTAATTGTACATTCGAACCTGTTTGACTAATAGTAGTTTGGAATCAAGGACATTTATCTGACAGGGTCTCCTTAATGTTGCATTAGGTTTGTGGAACATGAGAATTACATTTCTTTGGTAGTTAGGCTAGGTATGCGGTGAGGTTGGGGCAATTTCTGAATTACATTTCTTTGGTAGTTAGGCTAGGTATGAGGTGAGGTTGGGGCAAATTCTTTCTTTACTAGTTATGACCAGGGAAGGCTATCTGGAACGTGGTGCCTTGCCGAGGTTAAGGAATAAGGATGAGATAACGATTATAAGTGGATTTAGCTGCTTGCTTGGGGGAGTTTGCAGAAGTTCATGAGGCTTGTCAGTGAATGAGTGTTGTGCTGATTCCTGTTATTCACTAGCATAGAACACTATACTATACAGATGTCATGCTATCATCATATCATGCTTATAACATGAATCAGTTACCAGTATTTATGATTTTAATTAAGCATGCAACTTCTACAAGACACATCACTGTGTTTTTCTGCCTTCACATGCTTGCTTCGATTGAGTTCCTTGCACTTGTTATACATATTCAGTATGCAACGTCAATGCTTGGTAGTGCTGCACTGGTTGATGCTGCTGCCTTATATTATATAATTTGTGCGTACACATCACGGGTTTTTATATGCTAAGCTGCAAACATTAGATTTTTTTTCTAGACATTTTACTGCTTTACTAAGTACTAAGAAGTAAGATCTAGATGTCCTTTTTGTTTCATATAGCAATGTGCACTCCAAGATATCATTAGCATCTCCTTTAGATTTATTAGTCTATTTAGAATCTTGGTGTATTATATCCTTTTCTGTTACTTTCTCTTAGGATGAACACTCATTCGATCATTGTGATTCAACTTTACATGGTATCAGATATCAAATTATCGTTCTTCTGTGCAGCTGTTTGCAGGGAATGATGCTGATGAATTCAATGCAGTTCTGAAGCAGCAAACAACTCCAAAAGTGTTGATTACCACATGTCGCTTCAATTCAGGCGTATGCATTTTCTATGCTTATCACCTCTGCTTTTGGATTTTTGTTCTTCTCAATATCTTGTGCTGGCTGTTCTGAATTGATAATTATTTGATAACCTCTATTCTTAAGAAGTTGCATCTAACACTTTATGTTTATCTGCACATATGTCTACAGAGGGGACCTGCCTTTATTGAGGAGTTAATGCAAGTGATACCCAATTCGTGTTATGTTAAAAGAGGAACTTATGAACTCAAGAAAGTATGACATGTTCAAAGTAGCTAACCTGTTCATTTGTTTGAATTAGACACTTCATATGGACTGAAACACATTTCTTTTTAGATTGTGGAATATGCAAATAACAGAGATTTCACTTCACTTGTTGTTGTCCACACAAACCGAAGGGAACCTGGTAAGAATCCATCAATTTATTAGTTCAAAATTTGCACTTGTTATCTGTTATGACATATTTATTGTTATTTGTGTCACAGATGCTCTACTGATCATCAATTTACCTGCTGGTCCTACTGCACATTTTAAACTATCTAAACTTATTCTGCGGAAGGACATAAAGGTACTTTATCTGTATTTTCTTTATCATACTAGCAAAATGCCTTTGCTATGGGTAAAATGCACATGCTTATTTGAATATATGTTATTCACTTGATTCAAATGAATATTAGACTATTATATAATACAAGAAAATATCAAGGACTATTTTGTAAGTTGTGCAAATGTAGTTGTGGGTTGGTGAACCACCACCACCGCTATTGTCTTTTACAGTAGTATAGATTATCACCTACTAACTAATGTTATATTGTTTTCTTAAATAATATCTACTGAAACTACAACTCTTAGATGAGTTATTCAAAATTTTGTTGGAAATGGTAACCTGTATTTATTTATTTTTATTTTTGTTTTTGGGAGAACTTGTTGAATAGCTTTGGTGTTGTCTACATATCTTTGTGCTAACTTAGCATATATTTTCACCATACCAAAGGGATAGGACAGCAACACTGTTATCCATCTTCTATGTGTTCTGATAATCTTTGTATTTGCATTGTGAAGAACAAATAGTAACAGCTACTTCAGACAAGCACAAATTAGTGCTATTTTTGAAGAATCATATGCATACTATCTTCTGCTACTGCAAATCTCCTGTATTAGTTAGTTTATAATAACTGTTTGATCTGTTTGTGTTTTTAATTGTGATCTGATCACGATATCCTTTGTTCTTAGTTTTTTGCACACATGTAAGAGTGAGAAAATCCCACGGCTGTCTAGATCTTAGCAAATTGACAACAATATGCTAGTTGGGAACTGTGATTATGTCCTCTCCAGAAAAAAAAAAGTTAACTGTGATTATGTGTTATGATGACTGAGAGCCAACACACATGGCTATTTTCTGAATTCTTTAGATCTAATGCTGATCTTTACCCTATTAAACATTTAAACCTCTATACACAAAAGGAAGAATATAAAATTATATGAGTATATTTAAAGTCAGATAGTAAATGTGCCATTGTTTTATTTTCAGAAATCTTAAACACAATCTTGTTTTTACCGAATGCTATCAGGAATTCATTAGGGACATACTGGTTGTGGTTTGGTATATTGTTATCTGCAGGAAAAGAGCCTTGCTTGTGCATAACAACTCCTTTTGAGGGTCTTATATTATTGTTAGTAATTAGTGCGGTGGCCTATTGGCTAATATAAACACATAGTGTAGTTCAGAAGATAAAACAAACTTTGATGATCACGTTCATCACAATGATGAATATGAAAATGTCAACTAATTCGTAACGTTGTTTAGATAGTTATGGTAATAACAATGATTATATCATAGCTGCATATCTGTTATTACACCGCTAACCTCTTTAGACTAAAGGTGCACTGGAAGTGAACAAAGCCCAAGTTGACATCAATTGGTCATCCTACTTGTCTCTAGTTTGTCTCTAGGATGACTTAGTCATCTGAGCTTTGCCCTCAAAATCAAATGTGCATGTGACTATGTTCGGTATCATATGACATGTCTGCTAGATGCTGATCCATGTCTCTATCCAACATAGCATGTTTTAGTTTTAGTTTTTCCAGTCTTTCAATGATTGTATAAATTATTGCAATTGCAATGGAGTTGGGTTGATAACCATGTTGCTGATGGTCATCTAGATTGATGGAAAGCAGAAAAAAAATAGCTGGAAGGAACGTCTTTATTCTGCTGCACCTGGACTTTGACTAATTTTAGTAGCGTTTCATATCCAGATTTATTCAGTTTATTTGATATGTTCTTGTTAAATGACAAAAGGTTCTCAGCTTATTTTCCAATATTATATAAATCTGTTTTTGAATTTTAGCTTTGCGAACCAGTTAATATTCATGGCTTTGTTTACCTTTTTGGTTGCAGAACCACGGCAACCCCACAAGTCATAAGCCAGAGTTAGTGTTGAACAATTTCACTACGCGCCTTGGTCATCGTGTTGGAAGGTGATTTGTGAACATGAACCCTTGTGCTCCTTTGCTGATCCTGTTTAGAAGAACTCTGTTTTCTTTTACATTAGCATGTTCATGTCTGCTGTTTGCTTCACTTGTCAATTTTCCCCTTCTGCCTTTTCAGGATGATACAATCTCTTTTCCCTCAAGAACCCAATTTCCGTGGTCGGCGAGTTGTGACCTTCCATAATCAGAGAGACTATATTTTTTTCCGTCATCACAGGTGCATTTATGAAAATTCAAGTAGGAAAAACCATGTTATTAAAGGACTCCTGTGTGTCTACGTAATTGTCTTTTGCTGGGATTTGTTGCATAATGTGGATCATTACAAGTGTTTTTAGTAATTACTTCCTGGACATTTCTTTAGCTCATAATTTTGTTGATCTGTGAAGTGTGTTATCAAAACCATGCTATCCTCCTTGCTAGTCTTGACATGTGCTTTTGATTATGTTTGTGGCTTCCATTTTACTGTGAGTATTCAAACTTATTTTCTTATGCAATACTAATGCTAGGTACATCTTTGAGATGAAAGAAAACAAAATTGCTTCAAAGGACAAGAAAGCTAAGACTTCTGAAAGCAAAAGCCAACCTGAGAAGCAAGTAATTTGTCGCCTCCAGGTATTTGAGCTACTTATTCAGTACTCACTACAAGTTCTGTAGGTGATGGCACATATTTCATTCAGTTCACAATCTGTTATTGGTCATCACCATCTGGCAACCCCAACCAAAGTGCTTTCTATGTTGCGTGTTTGAAGGGTGTTTCTGGTTTTCCGAGATATGCTCTCGCTTTCAACATCAAATGCTTACTGTCTTGCCAGTTAGACAAACACAATGATATCATTACTTAGGCCTAATGCTATTTATAATTGTTACCATGTTATTATTAGCCCTAGCAGTAAACCTAAGCTGTTCTGATGAACTAGGAATGTGGTCCTCGCTTCACCCTCAAGCTGCTCACCTTACAACATGGGACCTTTGACACAAAAAATGGGGAGTATGAATGGGTTCACAAGGTACTATTATTCATTTACCGTCCCATGCCCACACTACACTCTACATGAAAGTTTTCTGACATGCTGCAAATCTTGCATCATTGCATCATTTACAGCCGGACATGGACACGAGCAGAAGAAGATTTTTCTTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021976

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