BGIOSGA021992

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Revision as of 13:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA021992| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA021992, complete gene.| tag = P0001H0...")
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Gene Name

BGIOSGA021992

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021992, complete gene.

LocusTag

P0001H02.13

Ensembl Transcript ID

BGIOSGA021992-TA

Ensembl Protein ID

BGIOSGA021992-PA

Length

3228

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2023717..2026944

Sequence Coding Region

2026805..2026944,2025665..2026018),complement(2024717..2024897,2024411..2024618),complement(2024008..2024135
,2023856..2023897),complement(2023717..2023758

Genome Context

<gbrowseImage1> name=IndicaChromosome06:2023717..2026944 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:2023717..2026944 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGATCACGGCGGCTCCCCTGTGCGGATGCGGTGTTCCGACCCCGCTTCACCGATGAGGACGCACGAGCGTGCAGCGATTCTCGTGGGCATTTCGCCTCAGGACGCGATCCATCCCCGCCGCCGCTGCTGCCGGCACAGTGTGAGGATCATGTGGGAGGTACCTCTGGTCTTGCAGATGTTTCATCCTTAGGGGACTTTCCTGGTGCTACAACATTGAAAGAATCAACCGCTTCCAGTCCCACTTCCTCCCTACAGGCAGTACCAGATGACACCATTGATGCTCCGCAGTCAGGGCACTGCCTTTCCTCATCCCTTGGCTCAATCATTTGGGTTCAGAAACCTCCTCATGGCCGACCTGGCGTATACCACATTAGAAAGGATCGTTTGGGGTCTTTCCATACGTATCCTGATCTGGGTGGTCCATTTCAGAGCTTGAATGAAGCTGAAGATGTTATCAGTAGCCATATTAACAAGCTGTATCCACCAGTTAAGTTCGAGGAACGAGCTGGGGAATCTTACGTGGACATGATTATAAGGAAAGCACTTTATTGGCCTGATGGCACTAGGAAGAAATGTTCCAAAGCAGAAGCATTTCAGAATGTCAATAATAATATGAATCAACTGGCTAAGGTGATATTAGACATGTATAACGATGACCACAATCTTTTGGAGGATCTTGCTTTTGAGCTCAAAGGTGTCATTAACTATGAACCAATTATTGAAAGTCGTAGGTGGTTTGATCATATTAATTTCACTGCGACTACTAAAGGACTAAATGGGTTGGACAGTGACCATCTATTTTTCGCTGAAGCGATGTCTTTGAAAGGAGAAAAAGATTATGTGGTCACTTGCTGCTCTTTGATAAGTTCTGATGACAATGGTAACTGCTATACCTGCAAGATTGGGAATAAAAGTATGAAGCACCCAAGTGATGTCAATTCATATGTTGGTGGTCACTGTTATATCAAAGGAATATATGACACTATAGTGTCGAGTGACTCTGAAGAGGATGAGGATGCAGAGGAGCAGAGGCTAAGAAAAATGTATCAGGGTCTTGATGATCCAGGTGTATGTGAAGAGCTCTTTGATTGA</cdnaseq>

Protein Sequence

<aaseq>MRSRRLPCADAVFRPRFTDEDARACSDSRGHFASGRDPSPPPLLPAQCEDHVGGTSGLADVSSLGDFPGATTLKESTASSPTSSLQAVPDDTIDAPQSGHCLSSSLGSIIWVQKPPHGRPGVYHIRKDRLGSFHTYPDLGGPFQSLNEAEDVISSHINKLYPPVKFEERAGESYVDMIIRKALYWPDGTRKKCSKAEAFQNVNNNMNQLAKVILDMYNDDHNLLEDLAFELKGVINYEPIIESRRWFDHINFTATTKGLNGLDSDHLFFAEAMSLKGEKDYVVTCCSLISSDDNGNCYTCKIGNKSMKHPSDVNSYVGGHCYIKGIYDTIVSSDSEEDEDAEEQRLRKMYQGLDDPGVCEELFD</aaseq>

Gene Sequence

<dnaseqindica>1..140#927..1280#2048..2228#2327..2534#2810..2937#3048..3089#3187..3228#ATGAGATCACGGCGGCTCCCCTGTGCGGATGCGGTGTTCCGACCCCGCTTCACCGATGAGGACGCACGAGCGTGCAGCGATTCTCGTGGGCATTTCGCCTCAGGACGCGATCCATCCCCGCCGCCGCTGCTGCCGGCACAGTACGACCACCACCTCTCCCCTTCCACCTCCCTCGATCCTTTCTCTGTTTCTAATTGGTATCTTAGAGAGAGTTTTGTTTTGATAGATAGAATACCTGAAGGAACTAGGAATCTAGGATTGGTTAATTTCGATTAAATCGAATTATTTTAATTACTTGTGGTCATGGCTATTCCCTAATAAGGAGGAGACGAGTTGCGACTGTTGATCTTTGAGGAGAGGAAGAAGGCTTGAGGACCTCCATTTGATAGAAAATCGAAGCCCCGATCTTACAGATTTTTGACCTTCTGGTCTGCTCCGAGATTCATGCAACATGATCACCTCCTGCTCTGGTGAGCTCGTTGATCTCCGGCGACGATGGTGGTGGGCAGAGGGGGAACAGGGGGGAGGTTCCTGAGTTTAGAGGTAGGCCGGAGTGGACAAGGCATCTACTGGTCGAGTGGTTAGGTTGTGGGGGCACCTCGCCGTTGTGCTTTCCAGCGGCGGCGTGCTGGGCCGGTGGCAGAGGAGGAGGCAGGCGATCCGCAGAATGGCGGCAGGACTGAGGGAGGGAGGAACAAGGGGTTAGGGCTGGTTGCATGAATCTCAAAACGATCCAACGTGTCCACAATTCACAAGATTTTTGGGGTTGTCTTCTGTCAAGTGTCAAATAGGTTATCTCATAAAAATATGCATTTCCATGAATCATAGTTATATATATATTTCTGGGTCTATTAACCTGCATTGTACAACGAAGTATTGATTTCATAAGATGAATTGTTTGTACTCACTGATCTTGTTCACTGCAGGTGTGAGGATCATGTGGGAGGTACCTCTGGTCTTGCAGATGTTTCATCCTTAGGGGACTTTCCTGGTGCTACAACATTGAAAGAATCAACCGCTTCCAGTCCCACTTCCTCCCTACAGGCAGTACCAGATGACACCATTGATGCTCCGCAGTCAGGGCACTGCCTTTCCTCATCCCTTGGCTCAATCATTTGGGTTCAGAAACCTCCTCATGGCCGACCTGGCGTATACCACATTAGAAAGGATCGTTTGGGGTCTTTCCATACGTATCCTGATCTGGGTGGTCCATTTCAGAGCTTGAATGAAGCTGAAGATGTTATCAGTAGCCATATTAACAAGCTGTATCCACCAGTTAAGTAAGGTTCCTACACTCTGTTGTAGCTTGCAACTACTCCATTTATTTCCCATGTGTTTGGTATGATATTCAGGGCATGAGTCATGAACAGAATTGTGGGCTGTAACTTGTAATTTAAAGTAGCTGATAGTGACGAGATCAGTTGAGCAAACGAGCAGTTTTAGGTAACTTTGTATATATGGGGGCATGGAGTTGTTAAGCACAAAATGACTGCAAACCATAAGATAACACGAAGTTCACAAATAAGCTACATTTCACTAGTTTTTACCTAGGAATTTTCAATTTCATTTGCAGCGTTTACAATTATATTGCTGCTCAGCTAGCTTTAATGTGTCAGAGGTAAACACGAGTGATCACACAGAACTTAGTCTAATCGCAGGTAAAAATAGGACGGAAAAACCAGGATGAGTTTAGGATCTAAACCTTGAAACTATGATACTTTCTATAGATTGATAAACTACAAGACGATAGCCATGCCCTTATATATCTAGAAACAAGCAAATTCAGTTACGCATGCCTTTTGAATTATGCATTTTCGTGCTTCTTTGATAACTGCAAAAAACCATACTACTGTTTTAGTTTGAACTAATATGAGTGCTAAATTTCAATTTGACAACATTTACTCAAACTTTTCTTATCCTGAAACTCTTAACTTATTGGAATGTAATCTCTATAACAAACTTCTTACCAGTGCCTTTGCAACCCCTGCATTGTACTATCTACATTCTGCCTTATACTAATGGTATGGACTGATCTGATTTGAGTTAGGTTCGAGGAACGAGCTGGGGAATCTTACGTGGACATGATTATAAGGAAAGCACTTTATTGGCCTGATGGCACTAGGAAGAAATGTTCCAAAGCAGAAGCATTTCAGAATGTCAATAATAATATGAATCAACTGGCTAAGGTGATATTAGACATGTATAACGATGACCACAATCTTTTGGAGGTTTGTTATCGCCCTCGTTGTCTGTCTCATTCTTTCTGCACTGTGATGATGTCTAATTGATTCCACACTTTCTGATCTTATTGTATTTCTTATTGCAGGATCTTGCTTTTGAGCTCAAAGGTGTCATTAACTATGAACCAATTATTGAAAGTCGTAGGTGGTTTGATCATATTAATTTCACTGCGACTACTAAAGGACTAAATGGGTTGGACAGTGACCATCTATTTTTCGCTGAAGCGATGTCTTTGAAAGGAGAAAAAGATTATGTGGTCACTTGCTGCTCTTTGATAAGTTCTGATGACAATGGTAAGCTATACCCATCTTAACTTTTATAGACTTGGATTCATACTTCATAATTTGTATATACTCATGCACCTGGGAGACTTCATAATTTGTATATACTCATGCACCTGGGAGAAGCATCGGTTTTGCATGTCTAGTTAATCTGTTTTTCATCGGTTCTTGCATTTTTTTTCCTTTTTACCTTCATTAGCTCAACTAGAATTTATGATATTTACATATAATTGGTGCTTAACTGATTGTGTGTCTGTCATTTCACGAACAACCTATTTCTTTCTCAGGTAACTGCTATACCTGCAAGATTGGGAATAAAAGTATGAAGCACCCAAGTGATGTCAATTCATATGTTGGTGGTCACTGTTATATCAAAGGAATATATGACACTATAGTGTCGAGTGACTCTGAAGAGGTCTGATGATCTATCTTTTCCCCCATTTAGTTTTTGTAAGACATTCATGCATATATTAAGATTCATTATTACAATGTTAGTGACACATTTTTCTGCCCTTGGATTGACAGGATGAGGATGCAGAGGAGCAGAGGCTAAGAAAAATGTATCAGGTATGTGACATGCTTCAGACCGAACGTTATTATGCATGCAGTATGGTGTCTTTTTTTTTTCTCTCTCAATTGGTAATTGCTCTCGTGTTTTTCTTAGGGTCTTGATGATCCAGGTGTATGTGAAGAGCTCTTTGATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021992