BGIOSGA022012

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Revision as of 13:10, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022012| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022012, complete gene.| tag = P0538C0...")
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Gene Name

BGIOSGA022012

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022012, complete gene.

LocusTag

P0538C01.25

Ensembl Transcript ID

BGIOSGA022012-TA

Ensembl Protein ID

BGIOSGA022012-PA

Length

3413

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1747951..1751363

Sequence Coding Region

1751019..1751363,1750393..1750608),complement(1749898..1750182,1749252..1749590),complement(1748515..1748715
,1747951..1748142

Genome Context

<gbrowseImage1> name=IndicaChromosome06:1747951..1751363 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:1747951..1751363 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTACCCAGCTCACCTACCTAGCTGCATCAGCAGGAGTGTGCTTGGCTTCAGCTCTAGCCATCGCCTTGCTGTCCATCGCCCTCTACATCATCGGCGTCGTCGCCTCCTTCGCCGTCCTCTGCGCCAAGGAGTTCGCCGAGAGAGCCCACGACCGGCCGCCGCTCGTCGGAACAGTTTTCCGGCAGCTCAAGAACTTCGACAGAATGTTCGATGAACATGTCAACTATGCAACCGCGCATCGCACCAGCAGGATTGTGTATCCCGGTCACTGCGAGGTCTTTACTTCTGATCCGGCCGTCGTTGAGCATGTCCTCAAGAACAGCTTCAGTAAATACAGCAAGGGGGACTTCCTCACTACAGCCATGAAGGATCTCTTTGGAGATGGAATTTTTGCAACAGATGGGGATATGTGGCGTCATCAGAGGAAGCTAGCGAGCTACGAATTCTCAACCAAAGTGTTACGTGACTTCAGCAGTGACACATTCAGAAGGAATGCTGCAAAACTGGCAGAGAAGATCTCATGTGCAGCAGCTAACAGAATTAGCATAAATATTCAGGATCTTTTGATGAGAGCAACTATGGACTCAATCTTTAAAGTGGGGTTTGGTTTTGAGCTCAACACACTATCTGGATCAGATGAATCTGGCATTCAATTCAGCAAGGCCTTTGATGAGGCAAACTCCCTTGTTTACTACCGATTTGTTGACATAATGTGGAAACTGAAAAGGTATCTTAACATTGGATCAGAAGCCAAACTCAAGAGGAACATTCAGATCATCGACAGCTTTGTGATGAAACTGATCCATCAGAAGAGAGAGCAAATGAAGATTGCAGCTGACTATAAAACCAAAGAGGACATCCTATCAAGATTTGTACTAGCAAGTGAGCAAGATCCTGGAACAATGGATGACCGCTACTTGCGTGACATAGTCCTCAACTTCCTGATAGCTGGGAAAGACACCACAGGAAATACCCTTACCTGGTTCTTCTACCTGCTATGCAAGAACCCCATAGTGCAGGATAAGGTTGCCCTTGAAATCAGAGAGTTTGTTGAATGGAGCAAGGAAGATAACACTATTGAAAGCTTCACCAAACGACTGGACGAAGGTGCAATTAGCAAAATGCACTACCTCCAGGCTACAATTTCCGAGACACTCCGGCTATATCCTGCTGTCCCAGTGGATGCTAAGATGGCAGACGAGGATGATGTACTACCAAATGGCTATAGAGTGGTAAAAGGAGATGGAATTAACTACATGATTTATGCCATGGGGAGGATGACATACCTTTGGGGTGAGGATGCACAGGAGTTCAGGCCTGAAAGATGGCTTGTGAATGGAGTTTATCAGCAAGAGAGCCCGTTCAAGTTTGTGTCTTTCAATGCTGGGCCACGTATCTGCTTGGGGAAAGAATTTGCACACAGGCAGATGAAGATCATGGCTGCTACCCTGATACATTTCTTCAAGTTCAGACTGGAAGATGAATCCAAGGAGCCAATCTATAAAACAATGTTCACTCTCCATATCGACAATGGTCTCCATCTGCTTGCAAACCCTCGAGAAATTTCACCATGA</cdnaseq>

Protein Sequence

<aaseq>MVTQLTYLAASAGVCLASALAIALLSIALYIIGVVASFAVLCAKEFAERAHDRPPLVGTVFRQLKNFDRMFDEHVNYATAHRTSRIVYPGHCEVFTSDPAVVEHVLKNSFSKYSKGDFLTTAMKDLFGDGIFATDGDMWRHQRKLASYEFSTKVLRDFSSDTFRRNAAKLAEKISCAAANRISINIQDLLMRATMDSIFKVGFGFELNTLSGSDESGIQFSKAFDEANSLVYYRFVDIMWKLKRYLNIGSEAKLKRNIQIIDSFVMKLIHQKREQMKIAADYKTKEDILSRFVLASEQDPGTMDDRYLRDIVLNFLIAGKDTTGNTLTWFFYLLCKNPIVQDKVALEIREFVEWSKEDNTIESFTKRLDEGAISKMHYLQATISETLRLYPAVPVDAKMADEDDVLPNGYRVVKGDGINYMIYAMGRMTYLWGEDAQEFRPERWLVNGVYQQESPFKFVSFNAGPRICLGKEFAHRQMKIMAATLIHFFKFRLEDESKEPIYKTMFTLHIDNGLHLLANPREISP</aaseq>

Gene Sequence

<dnaseqindica>1..345#756..971#1182..1466#1774..2112#2649..2849#3222..3413#ATGGTTACCCAGCTCACCTACCTAGCTGCATCAGCAGGAGTGTGCTTGGCTTCAGCTCTAGCCATCGCCTTGCTGTCCATCGCCCTCTACATCATCGGCGTCGTCGCCTCCTTCGCCGTCCTCTGCGCCAAGGAGTTCGCCGAGAGAGCCCACGACCGGCCGCCGCTCGTCGGAACAGTTTTCCGGCAGCTCAAGAACTTCGACAGAATGTTCGATGAACATGTCAACTATGCAACCGCGCATCGCACCAGCAGGATTGTGTATCCCGGTCACTGCGAGGTCTTTACTTCTGATCCGGCCGTCGTTGAGCATGTCCTCAAGAACAGCTTCAGTAAATACAGCAAGGTTTTTTACTTCAATCTTTCTTACCAAAATTTTCCGCCTGTGATTCTGTATGTCAGGCGTTTATTACCTGCAAGATTTGTACAAACGATGATCAAAAGCTTGCATGCTGTACAATACGGCATATGCTATGATATGTTCTATTATAAAAAAAAATATAGCTTAGTGCAATACACATGACTATATTCATTTCTGAAATAAAAGCTAAAATGACCGAGTAACATTACCATATATGGCTCGGTTAAAAAAAAACACATTTCCATATAAATAATTAACTTAAGAGAACAGTATATTTATATAAAGTTAGTTAGCATGTCCATATGAGTTAAACTCATAAGCAAGTTACTAGTAACTATGGAAAGTATATATAGTTGAGCCTATGAGATCTTACAGTGTTTGAGCCTGATTCACAGGGGGACTTCCTCACTACAGCCATGAAGGATCTCTTTGGAGATGGAATTTTTGCAACAGATGGGGATATGTGGCGTCATCAGAGGAAGCTAGCGAGCTACGAATTCTCAACCAAAGTGTTACGTGACTTCAGCAGTGACACATTCAGAAGGAATGCTGCAAAACTGGCAGAGAAGATCTCATGTGCAGCAGCTAACAGAATTAGCATAAATATTCAGGTACTTCCATGACTAAGATCAGCACAAAAGAAAGTTTTGGTAAATGCTAAGATCAAATTTATAGCTGTAATCTATACGCGTTTTAGTTCAGCACCTTTACAGAACTGCAAAAATTAAAACAAAACCTACATATAAATGAAAAAACTGGTAGTTCTCACTATTTCACCCTTTTAATTGCAAATCAAGTTATTGTCATTCAATTTTCCTCAGGATCTTTTGATGAGAGCAACTATGGACTCAATCTTTAAAGTGGGGTTTGGTTTTGAGCTCAACACACTATCTGGATCAGATGAATCTGGCATTCAATTCAGCAAGGCCTTTGATGAGGCAAACTCCCTTGTTTACTACCGATTTGTTGACATAATGTGGAAACTGAAAAGGTATCTTAACATTGGATCAGAAGCCAAACTCAAGAGGAACATTCAGATCATCGACAGCTTTGTGATGAAACTGATCCATCAGAAGAGAGAGCAAATGAAGATTGCAGCTGACTATGTAAGGGACTCAAAATTCTATCTGTAATGTTGTTTTCTACAGTTTATGATATCATGCCTTTCCAAATAGCTCATGTTTCTGGAGCAACAAGTAGATGCATAAAGTTGAATTTGCTAGTGAAATAACAGCAGCTTCCCAAATATTTCATTTTCAACTTGCTTGAATGCAGTTCTGTGGTCTGATGTGCTCCACAAATCCAAAATGAACTCTGAATTTAGTCACTCTAAGTTTTCTTAATACAAAAAAATATAAGACAGAGCTAACATACTGCATTGTTTTATTTCTAATTCTTTTTTATGGCACGCAGAAAACCAAAGAGGACATCCTATCAAGATTTGTACTAGCAAGTGAGCAAGATCCTGGAACAATGGATGACCGCTACTTGCGTGACATAGTCCTCAACTTCCTGATAGCTGGGAAAGACACCACAGGAAATACCCTTACCTGGTTCTTCTACCTGCTATGCAAGAACCCCATAGTGCAGGATAAGGTTGCCCTTGAAATCAGAGAGTTTGTTGAATGGAGCAAGGAAGATAACACTATTGAAAGCTTCACCAAACGACTGGACGAAGGTGCAATTAGCAAAATGCACTACCTCCAGGCTACAATTTCCGAGACACTCCGGCTATATCCTGCTGTCCCAGTGGTATGAATAACTTTCACGGCTATTCCCTGTATAGAGTGGAGTTGAACTAAAATAAATCTAGTCATGATTTGGCTCGATATGGATCTGGTATTAAGTAGGTCACATGCCAACAATGGATATTAGTATTGGAAGTGTTATCTCATATTGAAGGGTTCATTCCTCAGCATGGAAACCTACATTACCATGAGATATCTGAATATAACAGTAAATAATGAGAAACAAAGTAAAGAGAATCTTAGTTATCCTTGGGAATTCTTGCCCAAAAGAAAAAAATATTAAGGAGTATTTTCATTTGTCCACCATCTTTTTGTAAAGTAAGGAAATATTATAGGAAGAGGCTGCAAGGCAAGTGTTGTTCAAAGAGAAGTCTTAATTATGCAGCATAGCTTTATGGTACTGTTAGATTTTAGTGCAATCTGCAATATTCATTAAAGGGAAAATCAATATCACATTTCTCAAACGTTGTACGCACAAAAAAAAAATATGACTAAAAACATCATCGCCTTCGTAAAAATACTTTTATATTGTTTTTGCAGGATGCTAAGATGGCAGACGAGGATGATGTACTACCAAATGGCTATAGAGTGGTAAAAGGAGATGGAATTAACTACATGATTTATGCCATGGGGAGGATGACATACCTTTGGGGTGAGGATGCACAGGAGTTCAGGCCTGAAAGATGGCTTGTGAATGGAGTTTATCAGCAAGAGAGCCCGTTCAAGTTTGTGTCTTTCAATGTAAGTACTACCAGCAAGAATCATTTACCTCAACATGTTTAAATCTAGCCTTCTGTAGATCAAGAAGAAAAGTCAAATATACAATACCGCATTCCAACTGAAGCAGGGAAAAAGAATATCATGCTACAAAATTGCAAGTAACAATAAATCATCCCATGCATGTCTTTCTTTTCAGAATGAGGTGATAATATCACCTGTATTTTGAGGATGAGGATTGAAACTTGCATCATGCGGTTACATTTAGCCAAATAAAACCATAATTGCATGTGTTAACACTTAACACCAGTTCTCATATTCTAAAAATAACCCAAGACAATTTCACTTTCCTGTAGACAAGAATCTCCATTAATAAGTCTATTTTACCATGATCAGGCTGGGCCACGTATCTGCTTGGGGAAAGAATTTGCACACAGGCAGATGAAGATCATGGCTGCTACCCTGATACATTTCTTCAAGTTCAGACTGGAAGATGAATCCAAGGAGCCAATCTATAAAACAATGTTCACTCTCCATATCGACAATGGTCTCCATCTGCTTGCAAACCCTCGAGAAATTTCACCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022012

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA022012&oldid=44537"