BGIOSGA022028

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Revision as of 13:11, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022028| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022028, complete gene.| tag = OS06G01...")
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Gene Name

BGIOSGA022028

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022028, complete gene.

LocusTag

OS06G0125400

Ensembl Transcript ID

BGIOSGA022028-TA

Ensembl Protein ID

BGIOSGA022028-PA

Length

3766

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1527802..1531567

Sequence Coding Region

1531489..1531567,1530927..1531399),complement(1530649..1530746,1529134..1529703),complement(1528798..1529053
,1528524..1528706),complement(1527802..1528419

Genome Context

<gbrowseImage1> name=IndicaChromosome06:1527802..1531567 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:1527802..1531567 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTCCTCCCACCAAGAAGACCGCGAGGAGGAGGAGGAGCACAGCCATGGCGACGACGAGATCACCGCCCCGTTCTTGCGGCCATCGACGTCGAGGGGGTCGCCGGAGTTGGAGGAGGAGGAGAACTCGCCGATCGAGCAGGTGGCGCTGACGGTGCCGGTGAGCGACGAGCCGGAGACGCCGGTGCTGACGTTCAGGATGTGGGTGCTGGGGACGGCGTCGTGCGCGGTGCTCTCCTTCCTCAACCAGTTCTTCTGGTACCGCAAGGAGCCGCTCACCATCACCGCCATCTCGGCGCAGATCGCCGTCGTGCCGCTCGGCCGCCTCATGGCGGCGGCGCTGCCGGAGCGCGCCTTCTTCCGTGGGCGGCCGTGGGAGTTCACGCTCAACCCGGGGCCGTTCAATGTCAAGGAGCACGTGCTCATCACCATCTTCGCCAACTCCGGCGCCGGCACGGTGTACGCCATCCACGTCATCACCGCCGTCCGCGTCTTCTACGGCAAGCACATCTCCTTCTTCGTCTCCCTCCTCGTCGTCCTCACCACCCAGGTGCTTGGATTCGGGTGGGCGGGAATATTCCGGCGGTATCTGGTGGAGCCGGCGGCGATGTGGTGGCCGTCCAACCTCGTGCAGGTCTCCCTCTTCAGGGCGCTTCACGAGAAGGAAGCAAGGAGCAAAGGTGGGCTGACGCGCAACCAGTTCTTCCTTGTGGCATTCATCTGCAGCTTCGCATACTACATCTTCCCAGGCTACCTGTTCCAGATGCTCACCTCCCTCTCCTGGATCTGCTGGGTCTTCCCCCACTCTGTGCTTGCACAGCAGCTCGGCTCAGGTCTCAGTGGCCTTGGCATTGGCGCGATCGGTCTCGACTGGTCCACCGTCTCCTCCTACCTCGGGAGTCCTCTTGCTAGCCCATGGTTTGCCACTGCAAATGTTGCTGCTGGCTTCTTCTTCATCATGTACATAATCACACCGATTGCTTACTGGTTCAATTTCTACAAGGCACAAAACTTCCCCATATTTTCTGATGGTCTCTTCACCTCAACTGGCCAAAAGTACAATATCTCAAGCATTGTTGATTCTCATTTCCATTTCGACACAAAGGCCTACGAGAAGAATGGTCCACTATACCTCAGCACTTTCTTTGCTGTCACATATGGCGTTGGTTTTGCATCCCTTACCGCAACAATTGTTCATGTTCTCCTCTTCCACGGAAGTGAAATATGGCAATTAAGTAAATCAGCTTTCCAAGAAAAAAGGATGGACATACATACAAAACTTATGAGGAGATATAAGCAGGTTCCTGAGTGGTGGTTTGTCTGCATCCTCATTGCTAACATTGCCGTCACCATATTTGCTTGTGAATACTACATTGAGCAACTCCAGTTGCCCTGGTGGGGTGTTTTACTTGCATGTGCCATTGCCTTCTTCTTCACCCTCCCAATTGGGATAATTACAGCAACAACGAACCAGACTCCAGGCTTGAACATCATCACAGAGTATATCATGGGGTACTTGTACCCTGGACGACCGGTAGCAAATATGTGTTTCAAGGTATATGGTTACATCAGCATGAGCCAGGCCCTGACATTTCTTCAAGATTTTAAGTTGGGTCACTACATGAAGATTCCACCAAGGACCATGTTTATGGCTCAGGTGGTGGGAACTTTGATTGCAGCATTTGTGTACATTGGAACGGCATGGTGGCTGATGGAGACAATTCCCAACATCTGTAACACTGAGCTCCTCCCATCAGATAGCCCTTGGACCTGCCCAGGAGATCATGTGTTCTATGATGCATCAGTCATATGGGGTCTTATTAGCCCACGCAGAATATTTGGGGACTTAGGCACCTACTCGGCGGTAAACTGGTTCTTTTTGGGTGGAGCTATTGCCCCTGTCCTTGTCTGGTTTGCACACAAGGCATTCCCAAACCAGAACTGGATCTTGCTCATAAACATGCCTGTGCTGATTGGTGCCACTGGCCAGATGCCGCCTGCCACTGCCGTCAACTACACAACATGGATACTTGTTGGTTTCTTGTCAGGTTATGTGGTCTATAGATATCGACGTGACTGGTGGGAGCGGCACAATTATCTGCTTTCAGGTGCATTGGATGCTGGTTTGGCATTCATGGCTGTTTTGATTTACTTGTGCCTAGGCTTGGAGAACATCAGTTTGAACTGGTGGGGCAATGACTTGGATGGATGTCCTCTGGCTTCTTGCCCCACTGCTAAAGGTGTAGTTGTTGACGGATGCCCAGTCTATACTTGA</cdnaseq>

Protein Sequence

<aaseq>MASSHQEDREEEEEHSHGDDEITAPFLRPSTSRGSPELEEEENSPIEQVALTVPVSDEPETPVLTFRMWVLGTASCAVLSFLNQFFWYRKEPLTITAISAQIAVVPLGRLMAAALPERAFFRGRPWEFTLNPGPFNVKEHVLITIFANSGAGTVYAIHVITAVRVFYGKHISFFVSLLVVLTTQVLGFGWAGIFRRYLVEPAAMWWPSNLVQVSLFRALHEKEARSKGGLTRNQFFLVAFICSFAYYIFPGYLFQMLTSLSWICWVFPHSVLAQQLGSGLSGLGIGAIGLDWSTVSSYLGSPLASPWFATANVAAGFFFIMYIITPIAYWFNFYKAQNFPIFSDGLFTSTGQKYNISSIVDSHFHFDTKAYEKNGPLYLSTFFAVTYGVGFASLTATIVHVLLFHGSEIWQLSKSAFQEKRMDIHTKLMRRYKQVPEWWFVCILIANIAVTIFACEYYIEQLQLPWWGVLLACAIAFFFTLPIGIITATTNQTPGLNIITEYIMGYLYPGRPVANMCFKVYGYISMSQALTFLQDFKLGHYMKIPPRTMFMAQVVGTLIAAFVYIGTAWWLMETIPNICNTELLPSDSPWTCPGDHVFYDASVIWGLISPRRIFGDLGTYSAVNWFFLGGAIAPVLVWFAHKAFPNQNWILLINMPVLIGATGQMPPATAVNYTTWILVGFLSGYVVYRYRRDWWERHNYLLSGALDAGLAFMAVLIYLCLGLENISLNWWGNDLDGCPLASCPTAKGVVVDGCPVYT</aaseq>

Gene Sequence

<dnaseqindica>1..79#169..641#822..919#1865..2434#2515..2770#2862..3044#3149..3766#ATGGCGTCCTCCCACCAAGAAGACCGCGAGGAGGAGGAGGAGCACAGCCATGGCGACGACGAGATCACCGCCCCGTTCTGTAAGCTCAGCAAGATCGTCGTCATCGAAGCTTAGCTCATAGCTTTTTCCGGTTGGTTGCTGCTCTGATCGGATCATGTGTATATGCAGTGCGGCCATCGACGTCGAGGGGGTCGCCGGAGTTGGAGGAGGAGGAGAACTCGCCGATCGAGCAGGTGGCGCTGACGGTGCCGGTGAGCGACGAGCCGGAGACGCCGGTGCTGACGTTCAGGATGTGGGTGCTGGGGACGGCGTCGTGCGCGGTGCTCTCCTTCCTCAACCAGTTCTTCTGGTACCGCAAGGAGCCGCTCACCATCACCGCCATCTCGGCGCAGATCGCCGTCGTGCCGCTCGGCCGCCTCATGGCGGCGGCGCTGCCGGAGCGCGCCTTCTTCCGTGGGCGGCCGTGGGAGTTCACGCTCAACCCGGGGCCGTTCAATGTCAAGGAGCACGTGCTCATCACCATCTTCGCCAACTCCGGCGCCGGCACGGTGTACGCCATCCACGTCATCACCGCCGTCCGCGTCTTCTACGGCAAGCACATCTCCTTCTTCGTCTCCCTCCTCGTCGTCCTCACCACCCAGGTACCGTACGTCACCTTGCTAGTTGCTACCATCCATGGCAGATCGAAAGTGACTTTGTTTTTTCTTTAGATTTCTTGTCGTCTTCAACCATCGATCATTCGATCGATCAGGTTATATGCATGATTGTTTTTGCGTTTGGTGTTCGTGTCGTGTAATGCGATCGAGGTTGTGGATGATCAGGTGCTTGGATTCGGGTGGGCGGGAATATTCCGGCGGTATCTGGTGGAGCCGGCGGCGATGTGGTGGCCGTCCAACCTCGTGCAGGTCTCCCTCTTCAGGTACCTACCATTCCTCTCTTCAACCAGCACATCTAGCTAGTATTTCTTTTTTAAGAAAATCATTTTTTTCTTTTGTTTAAGAATGAAGAGCAAATTTAAAATCGGTTCATGTGTATCTCATCTTGATTGATTAGAGATATTTTTGGCATTGATTATATACCTTAATTAATCAGCTGGAACATAGAGGTTGGACTTTGAATTAGTACTCCAAAATTTAGTGGTTGGACAGAGCTTGCTTTCTGCTGGTAAAACTATGAAAATTAAATTAAATGTAAATATGTGTGAGATGCGTATGCTTGCACGTAGGTGTTTAATTTGACGTTTCAGTTGTAAGACTCTCGCGCGTTTTGATAAGCGATTGATCGATCGATGAATCAAATGCCAAGTTAGCCAGCTGTCACTAATCATGACACGTCAGACTGGTCCTGCTTGCATTCAAGAGCATCAAAGAGGCTGGAATAGTTTGGGTCCTACAAGAAAATGAAACGGTTCAAACAAAAGAAGAGAAAAATATATGCATTCACATCACACAACATTTAGCAAATATAGTTAATGCAAACAGCAAAACCGTATAAACTGCCCATCATTGAGCTGGACAAGATGTGACCATTAATTAACTCGTGCTGTCTAAATTAATTTTTTTACGGTAAATTAAATTTGTTAGAGATTCGTAAGTTCAATGAATTGGTGGCCTCCCCAGGTCCCAGCCATGTAGGGTAGGAGGGCATATGATCCGGCCCAATAACAAGGCCCAGTTCGGGCTAATTTGTGGCCCAACACAGCTACATCCACCAGTTCTTCCCCAGATCATCAGCAAGGATCAAATGACCTTTTAAAGCCAAAGAACTTGGTACAAATGTTTGCAAGGATCAAATGACCTTTTAAAGCCAAAGAACTTGGTACTAAATGCAACTTACACATTTGCAAATGTATTTTGCTCATCAGGGCGCTTCACGAGAAGGAAGCAAGGAGCAAAGGTGGGCTGACGCGCAACCAGTTCTTCCTTGTGGCATTCATCTGCAGCTTCGCATACTACATCTTCCCAGGCTACCTGTTCCAGATGCTCACCTCCCTCTCCTGGATCTGCTGGGTCTTCCCCCACTCTGTGCTTGCACAGCAGCTCGGCTCAGGTCTCAGTGGCCTTGGCATTGGCGCGATCGGTCTCGACTGGTCCACCGTCTCCTCCTACCTCGGGAGTCCTCTTGCTAGCCCATGGTTTGCCACTGCAAATGTTGCTGCTGGCTTCTTCTTCATCATGTACATAATCACACCGATTGCTTACTGGTTCAATTTCTACAAGGCACAAAACTTCCCCATATTTTCTGATGGTCTCTTCACCTCAACTGGCCAAAAGTACAATATCTCAAGCATTGTTGATTCTCATTTCCATTTCGACACAAAGGCCTACGAGAAGAATGGTCCACTATACCTCAGCACTTTCTTTGCTGTCACATATGGCGTTGGTTTTGCATCCCTTACCGCAACAATTGTTCATGTTCTCCTCTTCCACGGAAGGTAAGTTTCATCTGGAATTGGACAGTCTATTGCCTGCGATATAAAATGAAGTAGGTAAGAATCATAATGTTTGCTTTCAGTGAAATATGGCAATTAAGTAAATCAGCTTTCCAAGAAAAAAGGATGGACATACATACAAAACTTATGAGGAGATATAAGCAGGTTCCTGAGTGGTGGTTTGTCTGCATCCTCATTGCTAACATTGCCGTCACCATATTTGCTTGTGAATACTACATTGAGCAACTCCAGTTGCCCTGGTGGGGTGTTTTACTTGCATGTGCCATTGCCTTCTTCTTCACCCTCCCAATTGGGATAATTACAGCAACAACGAACCAGGTACAAATTAAATTTTAATACCTTGTGCATATTATGTCATATAGCTCTAGAGCAAACAGTTCAGCACTTCATCATTTCCCATCGTGTGCAGACTCCAGGCTTGAACATCATCACAGAGTATATCATGGGGTACTTGTACCCTGGACGACCGGTAGCAAATATGTGTTTCAAGGTATATGGTTACATCAGCATGAGCCAGGCCCTGACATTTCTTCAAGATTTTAAGTTGGGTCACTACATGAAGATTCCACCAAGGACCATGTTTATGGCTCAGGTTAGCTTTACTAGCCATTTAGTTTATCTGCCATTTCTCCTAAAAGAAGTAAAAACATGATCCTGCTGCATTGTGCCACTAATGAACTTCTTGGAACATGGCAGGTGGTGGGAACTTTGATTGCAGCATTTGTGTACATTGGAACGGCATGGTGGCTGATGGAGACAATTCCCAACATCTGTAACACTGAGCTCCTCCCATCAGATAGCCCTTGGACCTGCCCAGGAGATCATGTGTTCTATGATGCATCAGTCATATGGGGTCTTATTAGCCCACGCAGAATATTTGGGGACTTAGGCACCTACTCGGCGGTAAACTGGTTCTTTTTGGGTGGAGCTATTGCCCCTGTCCTTGTCTGGTTTGCACACAAGGCATTCCCAAACCAGAACTGGATCTTGCTCATAAACATGCCTGTGCTGATTGGTGCCACTGGCCAGATGCCGCCTGCCACTGCCGTCAACTACACAACATGGATACTTGTTGGTTTCTTGTCAGGTTATGTGGTCTATAGATATCGACGTGACTGGTGGGAGCGGCACAATTATCTGCTTTCAGGTGCATTGGATGCTGGTTTGGCATTCATGGCTGTTTTGATTTACTTGTGCCTAGGCTTGGAGAACATCAGTTTGAACTGGTGGGGCAATGACTTGGATGGATGTCCTCTGGCTTCTTGCCCCACTGCTAAAGGTGTAGTTGTTGACGGATGCCCAGTCTATACTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022028