BGIOSGA022100

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Revision as of 13:12, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022100| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022100, complete gene.| tag = P0644B0...")
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Gene Name

BGIOSGA022100

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022100, complete gene.

LocusTag

P0644B06.26

Ensembl Transcript ID

BGIOSGA022100-TA

Ensembl Protein ID

BGIOSGA022100-PA

Length

5455

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:421040..426494

Sequence Coding Region

425409..426494,425006..425329),complement(424562..424690,424360..424482),complement(424083..424250
,423585..423713),complement(423377..423511,422819..422946),complement(422629..422740
,422208..422531),complement(422034..422138,421637..421932),complement(421040..421562

Genome Context

<gbrowseImage1> name=IndicaChromosome06:421040..426494 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:421040..426494 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTACAAGCTGGACCCCGAATGAGAGCAATACAGGAGCCGTAGAGTACCCGTCCAACATGGTGTTCTACGCTGAATACCCAGGATGGTACTTTGACACCAATACTCAGCAGTGGCTCTCACTGGAGTCGTATCAGCAAGGTGGTGTGCAGGCAGAAACTACTGCAGCAGCCTCAGCTGGATATGCAGGAACAGGCCATAATGTAGCTCAAACCAGTGATTCTTACACAGGTGACTGTAGCCATCAGGGACAACAGCAACATGGCTCGTTGGGTGATAACAGCTTGTCGGATAGTTTTTATGGTTCCAACCAGCACACTGAGAATCAAACTGCTCAGCAGGCAAATGTCGAGTCATTGGAATCTTCTAAGTATTATCATGCTGATATCAACACATATGCGCATTCTACAAGTCAGTACACTAGTAGTGAGGATCACCAGGCGAGTTACAAGGGATTCGGATCTTCCACTAGTCATCAGAGTGTTTACAAGGGTTTTGAACCATCTGTAGGTCATCAAAGTACTTTTACCAGCCATCATAGTGGGTACAATGGCTCTGAATCTTCCACAGTCCAACAGGCTGCTCACCAGGGATTTAAACCTTCTACAGGCAACCAGAATTATAAGGGGTTTGAGCCTTATTCAGGTCACCAGTTGGGATATAAGGGATATGATTATTCTACGGGCCAGACTGGCCACCAGGAATTTGGACCTTCTACAGATAGTCAAGCTAACCATGTGGCATACCAACAGTTACCAAGCCATTACAGCAGCTTCGATGGTGCTGCTAAGCCACAAGACTCTGTTCCAACAGCAAACATGCCCCAGATGCAAACACGTGCTGATTCTGATGGATGCATGAATTTGCCAAATAACTATTTGAGCACTGGAAGCTCTGTAAATTTTGCGCAGCAGCAATTCATCGATTCCAATGCTTTACCTCAACAATTTGGTTATTCCTCCCATGAGCAGAGGTCATCAGCTGGACGCCCACCACATGCTTTGGTTACATTCGGATTTGGGGGGAAGCTTGTAGTTGTGCGAGAGACCATTTCAATGTCCACAAACTTTGATAGTGGGAATCAGGGAAATCCATGTGGCACAGTGTCAATTCTTAATGTGTCAGAGATTGTTTCTGATAGAGTTGATCATCCAAGTATCCCTAGTGGTAGCGCACTTAGTTACTTCCATGCATTGTGTCGTCAACCTATTCCTGGCCCCCTTGTTGGTGGAAGTGCTGCAGCAAAGGATGTGAACAAGTGGCTTGATGAGATCACCGGAGGCTATGATTCCTCTATCAGGGAGTTCCAGGGAGGAGATGATCAGAAGTTGCTCATTTCACTGCTTAAAATATTGTGCCAACACTATGGAAAGCTCCGTTCACCTTTTGGGTCTGATCCATCGCAGGAGGGTATAGATGGTCCAGAGATGGCAGTGACAAAACTTTTCTCATCTTGTAAGAGTAGTGGTGCTCATAAGGGAGAGTATGGAGCCATTGTCCATTGCATGAAAAACATTCCGTCAGAAAACCAGATCCAGGCTACTGCTAAGGAGGTTCAAAATCTCCTAGTTTCTGGTAGAAGGAAAGAGGCTCTTCAGTATGCTCAGGAAGGTCAGCTTTGGGGACCCGCATTAATCCTTGCTTTACAACTTGGTGATAAGTTTTATGTGGATACTGTGAAGAAAATGGCTTACCACCATTTTGTATCTGGATCACCTTTGAGGACGTTGTGCCTTCTTATTGCGGGACAGCCTGCAGATGTTTTCAATGCTGAGAACCCTGTTGATGGCAATTATGGTAATTTGCATATACCCCAACGGCCGGTGGAGGCTGTGAATTCTAAGAGCATGCTGGATGATTGGCAAGAGAATTTGGCTATTATAACTGCAAACAGGACGAAAGGTGATGATCTTGTAATTACGCACCTTGGAGATTGCCTCTGGAAAGAGAAAAATGAGGTGGCAGCTGCTCATTCATGCTATTTAGCTGCGGAACTAAATATCGAGTCGTATTCAGAAAGTTCAAGAATGTGTCTAATTGGTGCAGACCATTTGAGATGTCCTCGTACATTTACCAGCCCTGAAGCTATCCAGCGAACAGAGGTGTATGAATATGCAAAAGTTCTTGGTAATTCTCAGTACATCCTCTTGCCATTTCAACCATATAAGCTGATATATGCATACATGCTTGTGGAGGTTGGGAAGGTTTCTGATTCATTAAGGTATTGTCAAGCATGCTTGAAGGTGCTGAAAGCATCTGGCCGTGCACCTGAATTAGAGGCATGGAAGCAGTTGTTTTCATCCCTAGAGGAGCGGATACGCACCTACCAGCAGGGTGGTTATGGTACAAATCTAGCCCCTGCAAAGCTTGTTGGAAAACTTTTCACATCACTTGATAAATCTTTGTCCCGCATGATGGGTACACAACCTTCAGCGTTGTCACCAGTGCCACAGGGCTCCTTAACCGAAAGAGATTCCTATTCGGCTCCTGCAGCTACAAATTTTGTGAATAATCAGCCAGTGATGGCTATGTCTTCTTTGATGTCTTCTGTTTCAGAGCAATCTATGAGTGAAATGTCAGGAAATACTGGCCCTGACAGGAAAGTCACACATAACAGAAGTGTCTCTGAACCAGACTTTGGCAGAACCCCCAACCAGGGTGCAGGATTAGATAATGCACAAAGCACATCAGGTTCAGGTAGTTCACGTTTTGGATGGTTGCTGCAGAAGACAATGGGACTTGTTTCAAGATCTCATCATCAGGCAAAGCTGGGGGAACAAAACAAGTTCTACTATGACAAGAAGCTGAAGCGGTGGGTGGAAGAAGGTGCTGACATACCTGCTGAGGAGCCTCCCCTTCCCCCACCTCCAACAAAGGCCTTGTTCCAGAACGGTATTCCAGATCAGAGTTCGAATGGCCCAGGCAGTGTAAGTTATACTGCTAATGGATTTTCAGAAGCAAGGCCTTTGAATCCTTCTGGGCCTAGTTCAGGGATGCCACCAATGCCACCTAGCCAGAACCAATTCTCAGCACGTGGACGGATGGGTGTTAGATCAAGATACGTCGACACATTTAACAAGGGTGGTGCAAGTGCCACTGGACCGTCATATAATAAACCAGCCACCCCATCCATGAATCCACTGTCTGGTGCCACTTTCTTTGTGCCAACTCCAGCTACTGTTGCGTCAGAGCAGATCCCTGACCCAACAGTCAATGTTCATCAGGATCAACCATCTTCCACGATAGCTCTGCGGGAATCCTCGGCTTCGCCACCACCATCAGTACAACCAATACCAGTTCAATCAAATATTCAGCGGTATCCAAGTATGGACAACATCATGACCCCATCTGGCAGTGGGAATGGCAGCTCATTCTCAAGGTCACGAGCAGCATCATGGAGTGGAGCATATTCAGAGCAGTTGAGCGGCAATGCTGTTTCGAGATCACCAGATGGACAACGGACCATGATGCAGTCTCCGTTGATTCCTGGACAGAAACAATCCCACAGCCGTTCCAGTAGTAACTCATCACTTCAATTCAACAATGGCCTGGGCGAGGATCTTCACGAGGTAGAGCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MATSWTPNESNTGAVEYPSNMVFYAEYPGWYFDTNTQQWLSLESYQQGGVQAETTAAASAGYAGTGHNVAQTSDSYTGDCSHQGQQQHGSLGDNSLSDSFYGSNQHTENQTAQQANVESLESSKYYHADINTYAHSTSQYTSSEDHQASYKGFGSSTSHQSVYKGFEPSVGHQSTFTSHHSGYNGSESSTVQQAAHQGFKPSTGNQNYKGFEPYSGHQLGYKGYDYSTGQTGHQEFGPSTDSQANHVAYQQLPSHYSSFDGAAKPQDSVPTANMPQMQTRADSDGCMNLPNNYLSTGSSVNFAQQQFIDSNALPQQFGYSSHEQRSSAGRPPHALVTFGFGGKLVVVRETISMSTNFDSGNQGNPCGTVSILNVSEIVSDRVDHPSIPSGSALSYFHALCRQPIPGPLVGGSAAAKDVNKWLDEITGGYDSSIREFQGGDDQKLLISLLKILCQHYGKLRSPFGSDPSQEGIDGPEMAVTKLFSSCKSSGAHKGEYGAIVHCMKNIPSENQIQATAKEVQNLLVSGRRKEALQYAQEGQLWGPALILALQLGDKFYVDTVKKMAYHHFVSGSPLRTLCLLIAGQPADVFNAENPVDGNYGNLHIPQRPVEAVNSKSMLDDWQENLAIITANRTKGDDLVITHLGDCLWKEKNEVAAAHSCYLAAELNIESYSESSRMCLIGADHLRCPRTFTSPEAIQRTEVYEYAKVLGNSQYILLPFQPYKLIYAYMLVEVGKVSDSLRYCQACLKVLKASGRAPELEAWKQLFSSLEERIRTYQQGGYGTNLAPAKLVGKLFTSLDKSLSRMMGTQPSALSPVPQGSLTERDSYSAPAATNFVNNQPVMAMSSLMSSVSEQSMSEMSGNTGPDRKVTHNRSVSEPDFGRTPNQGAGLDNAQSTSGSGSSRFGWLLQKTMGLVSRSHHQAKLGEQNKFYYDKKLKRWVEEGADIPAEEPPLPPPPTKALFQNGIPDQSSNGPGSVSYTANGFSEARPLNPSGPSSGMPPMPPSQNQFSARGRMGVRSRYVDTFNKGGASATGPSYNKPATPSMNPLSGATFFVPTPATVASEQIPDPTVNVHQDQPSSTIALRESSASPPPSVQPIPVQSNIQRYPSMDNIMTPSGSGNGSSFSRSRAASWSGAYSEQLSGNAVSRSPDGQRTMMQSPLIPGQKQSHSRSSSNSSLQFNNGLGEDLHEVEL</aaseq>

Gene Sequence

<dnaseqindica>1..1086#1166..1489#1805..1933#2013..2135#2245..2412#2782..2910#2984..3118#3549..3676#3755..3866#3964..4287#4357..4461#4563..4858#4933..5455#ATGGCTACAAGCTGGACCCCGAATGAGAGCAATACAGGAGCCGTAGAGTACCCGTCCAACATGGTGTTCTACGCTGAATACCCAGGATGGTACTTTGACACCAATACTCAGCAGTGGCTCTCACTGGAGTCGTATCAGCAAGGTGGTGTGCAGGCAGAAACTACTGCAGCAGCCTCAGCTGGATATGCAGGAACAGGCCATAATGTAGCTCAAACCAGTGATTCTTACACAGGTGACTGTAGCCATCAGGGACAACAGCAACATGGCTCGTTGGGTGATAACAGCTTGTCGGATAGTTTTTATGGTTCCAACCAGCACACTGAGAATCAAACTGCTCAGCAGGCAAATGTCGAGTCATTGGAATCTTCTAAGTATTATCATGCTGATATCAACACATATGCGCATTCTACAAGTCAGTACACTAGTAGTGAGGATCACCAGGCGAGTTACAAGGGATTCGGATCTTCCACTAGTCATCAGAGTGTTTACAAGGGTTTTGAACCATCTGTAGGTCATCAAAGTACTTTTACCAGCCATCATAGTGGGTACAATGGCTCTGAATCTTCCACAGTCCAACAGGCTGCTCACCAGGGATTTAAACCTTCTACAGGCAACCAGAATTATAAGGGGTTTGAGCCTTATTCAGGTCACCAGTTGGGATATAAGGGATATGATTATTCTACGGGCCAGACTGGCCACCAGGAATTTGGACCTTCTACAGATAGTCAAGCTAACCATGTGGCATACCAACAGTTACCAAGCCATTACAGCAGCTTCGATGGTGCTGCTAAGCCACAAGACTCTGTTCCAACAGCAAACATGCCCCAGATGCAAACACGTGCTGATTCTGATGGATGCATGAATTTGCCAAATAACTATTTGAGCACTGGAAGCTCTGTAAATTTTGCGCAGCAGCAATTCATCGATTCCAATGCTTTACCTCAACAATTTGGTTATTCCTCCCATGAGCAGAGGTCATCAGCTGGACGCCCACCACATGCTTTGGTTACATTCGGATTTGGGGGGAAGCTTGTAGTTGTGCGAGAGACCATTTCAATGTCCACAAACTTTGATAGTGGGAATCAGGTACGATTAGAATTTTTATTTGTAATTCTCTTCTTTGCAATGTCATCGTGACTGAAAAACTTTATTGCTGCAATTTAAGGGAAATCCATGTGGCACAGTGTCAATTCTTAATGTGTCAGAGATTGTTTCTGATAGAGTTGATCATCCAAGTATCCCTAGTGGTAGCGCACTTAGTTACTTCCATGCATTGTGTCGTCAACCTATTCCTGGCCCCCTTGTTGGTGGAAGTGCTGCAGCAAAGGATGTGAACAAGTGGCTTGATGAGATCACCGGAGGCTATGATTCCTCTATCAGGGAGTTCCAGGGAGGAGATGATCAGAAGTTGCTCATTTCACTGCTTAAAATATTGTGCCAACACTATGGAAAGCTCCGTTCACCTTTTGGGTCTGATCCATCGCAGGAGGTATTTGCTTTTTGTCTTGCTGTACTATATTTCTATAATTCATGACCACAGTTAAAAACATCTCCTTGTCAAGTTGTCATTAATTTCTCACATGGAAAAATGGCCTGTCCATACAGGATTTTAAGCATGTAACCAGCAACGCTGAAGTAATGTATGCATGTTAAACTGGACCTATGAAATGAAAAGACCTATTCTTCCTTGAGTTCACTTTATTTTTCAATCAGCTTTATCATATAACTGCTGGCTATCTTTTATTGAATTTATTTCTATTCTTTTGAAAGGAATATTGAATTTATTTTGAATTCTTGGTAACAGGGTATAGATGGTCCAGAGATGGCAGTGACAAAACTTTTCTCATCTTGTAAGAGTAGTGGTGCTCATAAGGGAGAGTATGGAGCCATTGTCCATTGCATGAAAAACATTCCGTCAGAAAACCAGATCCAGGTAATTCTTATTTCTCTCAGAACACCAGCTTCAGGGGAAAAAAATAGTAATCCTGGGTGTGGCAACCATTTTATTGCAGGCTACTGCTAAGGAGGTTCAAAATCTCCTAGTTTCTGGTAGAAGGAAAGAGGCTCTTCAGTATGCTCAGGAAGGTCAGCTTTGGGGACCCGCATTAATCCTTGCTTTACAACTTGGTGATAAGGTCTGCTACTATTGATATAAGTTTGCATTCATTTTTCGGCTGCATGATACACATATTTTTCTTTTTTCCCTGGACAGTTTGTTTAATGTTTTCTTGACTGGTGATGTAGTTTTATGTGGATACTGTGAAGAAAATGGCTTACCACCATTTTGTATCTGGATCACCTTTGAGGACGTTGTGCCTTCTTATTGCGGGACAGCCTGCAGATGTTTTCAATGCTGAGAACCCTGTTGATGGCAATTATGGTAATTTGCATATACCCCAACGGCCGGTGGAGGTAATACATAACTTCATTACCACATTCTTGATTGCTCATGACAGTAGAAGGATCTATTGATCAAACATTTAGACGGAATCCCTAAATTTATTACTCCTACCTGAATGATTATTCGATTCGAAGCAATAGGGGACATGTTGTCTATTTCTTTTGTTATAGGATCCAAATGCTTCTATTTAGACTCTATAATAATTCTATGTTGTTTATGACCTATAGTTCTATACTCATTTCGTGTTTATATGTCATGTGATGTATATCATTTGATTGTTCTTGACTTCCCATTTCATGATTTTCATACATTTTAGTTCTCATCTTTTATCGTGTGTGGATCATTAGGGTTGAACCTAACTTAGCATTTTTGTTGGATAGGCTGTGAATTCTAAGAGCATGCTGGATGATTGGCAAGAGAATTTGGCTATTATAACTGCAAACAGGACGAAAGGTGATGATCTTGTAATTACGCACCTTGGAGATTGCCTCTGGAAAGAGAAAAATGAGGTTTGAATCTGGCTAGTTGAGTATATGATTTATTGACATGGTTTTGTCAAATACCTTACATATTTTTATGCAGGTGGCAGCTGCTCATTCATGCTATTTAGCTGCGGAACTAAATATCGAGTCGTATTCAGAAAGTTCAAGAATGTGTCTAATTGGTGCAGACCATTTGAGATGTCCTCGTACATTTACCAGCCCTGAAGCTATCCAGGTCTTTTATACCTGTGCCATCTATTCGAAGTTTGTGCTTTCTGTGATGATAATCTTTAGCTACATGTTGCATTGGACATACATCAGTCAGATGAATGGTAGGATATTATTATGGGACACGCATTATGCTATAAGCTCCAACAATATCTCAGATATGAATCATTATGTATCTAATGTAGATGGTTTCGCATTTTTGCAGAGGAGCATGCGTATCACATATGTTTTTAGATGTGTCAAATTCTAGTGTTATTTTTTGCATGACTTACTTTAGTCAAAAGCTTTACAGTCCCTCTATTTGGACCACTTCTTACTCAGAAAATGGCATGATTAGATGATGATTGTCCTCGGCCTTAATTCATATTATTACTGTTTTTTTTTTGCTTTTGTCATTTGCTGTTTCTAAACAAATGTCCTCACAATGTAACAAACAGCGAACAGAGGTGTATGAATATGCAAAAGTTCTTGGTAATTCTCAGTACATCCTCTTGCCATTTCAACCATATAAGCTGATATATGCATACATGCTTGTGGAGGTTGGGAAGGTTTCTGATTCATTAAGGTAATTTGCTGAGTTACTATTCCAGTTTTTCCCCTGGTTTCTTAGTTACACACATTGACTTTAAACTACTCTCTTTAGGTATTGTCAAGCATGCTTGAAGGTGCTGAAAGCATCTGGCCGTGCACCTGAATTAGAGGCATGGAAGCAGTTGTTTTCATCCCTAGAGGAGCGGATACGCACCTACCAGCAGGTTTGAATTTATTGTAGCTGTTGCTTGCTGATTCTCGTATTTACTAGAGCAGACTGTTTCTTCCATGTTGACTGATGATCAACTCATTGTTATTCAGGGTGGTTATGGTACAAATCTAGCCCCTGCAAAGCTTGTTGGAAAACTTTTCACATCACTTGATAAATCTTTGTCCCGCATGATGGGTACACAACCTTCAGCGTTGTCACCAGTGCCACAGGGCTCCTTAACCGAAAGAGATTCCTATTCGGCTCCTGCAGCTACAAATTTTGTGAATAATCAGCCAGTGATGGCTATGTCTTCTTTGATGTCTTCTGTTTCAGAGCAATCTATGAGTGAAATGTCAGGAAATACTGGCCCTGACAGGAAAGTCACACATAACAGAAGTGTCTCTGAACCAGACTTTGGCAGAACCCCCAACCAGGTGCTTCTTAGACTGGAATGTTTTCTTGATGTGTTTCATTTCTCTTCTCTGAAATTGGAACTCTCACAGGGTGCAGGATTAGATAATGCACAAAGCACATCAGGTTCAGGTAGTTCACGTTTTGGATGGTTGCTGCAGAAGACAATGGGACTTGTTTCAAGATCTCATCATCAGGTGCTTGCTAAAACATTAAATTCATCCGATCCCGGTTTCGAACTGCATGTCACAGGAGTTTTTGATTTGTGTAACACAACTAATTCTTTTGTGCCCTAAAGGCAAAGCTGGGGGAACAAAACAAGTTCTACTATGACAAGAAGCTGAAGCGGTGGGTGGAAGAAGGTGCTGACATACCTGCTGAGGAGCCTCCCCTTCCCCCACCTCCAACAAAGGCCTTGTTCCAGAACGGTATTCCAGATCAGAGTTCGAATGGCCCAGGCAGTGTAAGTTATACTGCTAATGGATTTTCAGAAGCAAGGCCTTTGAATCCTTCTGGGCCTAGTTCAGGGATGCCACCAATGCCACCTAGCCAGAACCAATTCTCAGCACGTGGACGGATGGGTGTTAGATCAAGGTAATTTGTTTAGTTATTGCCGCTGTTTGCTTTATATACCAAGTGGCTTATATCATTTCCTTGCCCCCATGTAGATACGTCGACACATTTAACAAGGGTGGTGCAAGTGCCACTGGACCGTCATATAATAAACCAGCCACCCCATCCATGAATCCACTGTCTGGTGCCACTTTCTTTGTGCCAACTCCAGCTACTGTTGCGTCAGAGCAGATCCCTGACCCAACAGTCAATGTTCATCAGGATCAACCATCTTCCACGATAGCTCTGCGGGAATCCTCGGCTTCGCCACCACCATCAGTACAACCAATACCAGTTCAATCAAATATTCAGCGGTATCCAAGTATGGACAACATCATGACCCCATCTGGCAGTGGGAATGGCAGCTCATTCTCAAGGTCACGAGCAGCATCATGGAGTGGAGCATATTCAGAGCAGTTGAGCGGCAATGCTGTTTCGAGATCACCAGATGGACAACGGACCATGATGCAGTCTCCGTTGATTCCTGGACAGAAACAATCCCACAGCCGTTCCAGTAGTAACTCATCACTTCAATTCAACAATGGCCTGGGCGAGGATCTTCACGAGGTAGAGCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022100

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA022100&oldid=44625"