BGIOSGA022101

From RiceWiki
Revision as of 13:12, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022101| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022101, complete gene.| tag = P0644B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022101

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022101, complete gene.

LocusTag

P0644B06.24-2

Ensembl Transcript ID

BGIOSGA022101-TA

Ensembl Protein ID

BGIOSGA022101-PA

Length

4387

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:404315..408701

Sequence Coding Region

408672..408701,407931..408024),complement(407612..407712,407418..407515),complement(407269..407309
,407063..407118),complement(406852..406926,406652..406744),complement(406312..406542
,406159..406231),complement(405887..405972,405712..405797),complement(405423..405498
,405196..405263),complement(405044..405110,404878..404973),complement(404706..404808
,404485..404577),complement(404315..404385

Genome Context

<gbrowseImage1> name=IndicaChromosome06:404315..408701 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:404315..408701 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTCCTCCTCCGCCACTCTCCCAAGTTGCGAAGAGCGCATGCTATCCTCGGATGCGAGCGTGGGACTGTTGTTCGTCACTTCTCATCCAGCACTTGCTCCTCTCTTGTAAAGGAAGATACTGTATCAAGTTCCAACCTTCATCCAGAGTATGCAAAAAAAATTGGAGGATCAGATTTTTCCCATGACAGGCAGTCTGGAAAAGAGCTTCAGAATTTCAAGGTCTCACCGCAAGAAGCAAGTAGAGCCTCCAATTTCATGAGAGCATCCAAATATGGAATGCCAATTACTGCTAATGGGATACATAGTTTGTTCTCATGTGGGCAGGTAGTACCGTCTAGGTGTTTTTCAAGTGGAGCAGATTTGCCTCCACATCAGGAAATCGGAATGCCTTCACTCTCCCCTACCATGACTGAGGGAAACATTGCAAGGTGGGTGAAGAAAGAAGGAGATAAAGTCTCACCTGGTGAAGTTCTTTGTGAAGTAGAGACTGATAAAGCGACAGTGGAGATGGAATGCATGGAGGAAGGCTACCTTGCTAAAATTATCCATGGAGATGGTGCCAAAGAAATTAAAGTTGGTGAGATTATTGCCGTAACCGTGGAAGAAGAGGAAGACATCGGCAAATTTAAGGATTATAAGGCTCCATCATCTGCTGAATCTGCAGCTCCAGCCGAATCGAAGCCCCAATCTGAGCCCACAGAACCAAAAAAGGAGAAAGAGCAGCCAAAGGCTACAAAGACAGAAGAATCTTTTCTTTCAGAGGATCGCACATTCTCCAGTCCAATTGCAAGGAAATTGGCAGAAGACAACAATGTACCACTGTCAAGCATAAAAGGTACTGGCCCCGATGGGCGAATTTTGAAGGCAGATATTGAGGATTACTTGGCTTCTGTGGCCAAGGGTGCCAAGAAGGAAACAGCAGCAGCTCCTGGACTAGGCTATGTGGATCTTCCTAATACGCAAATAAGGAAGGTTACTGCAAACCGCCTGCTGCACTCCAAGCAAACCATTCCTCACTACTATCTGACAGTTGATACTCGTGTTGACAAACTTATTAAGTTGCGAAGTGAGTTGAATCCTCTGCAGGATACCTCTGGTGGCAAGAAGATATCCATAAATGATCTTGTTATCAAGGCCGCAGCATTGGCTCTTCGTAATGTTCCTGAGTGTAATAGCTCTTGGATGAATGATTTTATTCGCCAATACCACAATGTGAACATCAATGTTGCTGTACAAACTGAGGATGGCTTGTTTGTTCCCGTAATAAGGGATGCTGACAAGAAGGGCCTAGCCACTATCGCTGATGAGGTGAAGCAACTGGCTCAGAGAGCAAGGGACAACAGACTTAAGCCAGAGGATTATGAGGGTGGCACTTTCACTGTGTCAAACTTGGGAGGCCCTTTTGGAATTAAGCAATTCTGTGCCATCGTAAATCCTCCACAATCAGCAATTTTGGCTATTGGCTCAGCTGAGAAGAGGGTGATCCCTGGAGCTGAGGGTCAGTTTGAAGTTGGTTCGTTTATGTCAGCAACATTGAGCTGCGACCACCGGGTCATTGACGGTGCCATTGGTGCAGAATGGATGAAGGCGTTCAAGGGCTACATCGAGAATCCAACGACCATGTTGCTGTAA</cdnaseq>

Protein Sequence

<aaseq>MALLLRHSPKLRRAHAILGCERGTVVRHFSSSTCSSLVKEDTVSSSNLHPEYAKKIGGSDFSHDRQSGKELQNFKVSPQEASRASNFMRASKYGMPITANGIHSLFSCGQVVPSRCFSSGADLPPHQEIGMPSLSPTMTEGNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGDGAKEIKVGEIIAVTVEEEEDIGKFKDYKAPSSAESAAPAESKPQSEPTEPKKEKEQPKATKTEESFLSEDRTFSSPIARKLAEDNNVPLSSIKGTGPDGRILKADIEDYLASVAKGAKKETAAAPGLGYVDLPNTQIRKVTANRLLHSKQTIPHYYLTVDTRVDKLIKLRSELNPLQDTSGGKKISINDLVIKAAALALRNVPECNSSWMNDFIRQYHNVNINVAVQTEDGLFVPVIRDADKKGLATIADEVKQLAQRARDNRLKPEDYEGGTFTVSNLGGPFGIKQFCAIVNPPQSAILAIGSAEKRVIPGAEGQFEVGSFMSATLSCDHRVIDGAIGAEWMKAFKGYIENPTTMLL</aaseq>

Gene Sequence

<dnaseqindica>1..30#678..771#990..1090#1187..1284#1393..1433#1584..1639#1776..1850#1958..2050#2160..2390#2471..2543#2730..2815#2905..2990#3204..3279#3439..3506#3592..3658#3729..3824#3894..3996#4125..4217#4317..4387#ATGGCGCTCCTCCTCCGCCACTCTCCCAAGGTCTCTCCTCTCCATTCCCCCCTCCCTCTCTCACTCTCCCCGTCTCTCTGTCTCTCGCGTCGTCGTCGTTGTTGGCACCGCATCCCGGTTTGTTGGAATTGGCGCTGCTCCGATCGATCCGTTCCGGCATGCGCCGATGCCCCCGGTTTGCCCACCACCTGCGGCTGCGCTCGCAATTGCTGCGCCTGAGGGCTGAGGCTTCTTCTTGGGTGTGCCAATCTATTCTCTCGCGGTTACCTACCTTGTCCTTCCTGCCCTTTTATTTTACAAGTTGGATTACAAGAGTACAATTATTTCTAGCGCTGATGCGCACTGTGATCACGGGATTTGTTTCAACTGTTCAAAATGTCCCCTTTTTTTTTTCAGAGTTGCACAAATCCTCTCTCGGTAATCACGCCGCTACTTTTAAACCCATTCTATTCATCTTACTCAACTGCTATCATGTACAAATCGATCTAGGTCATTGTGGAATTACACCAAAGCGCATGTCTGGCTTGCTCTATCTTCATGGGCCTCTGGTTTTTATCATTTATGTCAAACACAACAGGATTATATATGCTTGCATTTCGTCTATGAACATTCATTCTGTTATTATACATATATGGTTTGCATATGCTCATAGTTGCCTGCACAATCTACTCACACAGTTGCGAAGAGCGCATGCTATCCTCGGATGCGAGCGTGGGACTGTTGTTCGTCACTTCTCATCCAGCACTTGCTCCTCTCTTGTAAAGGAAGATAGTATGTGTTCTCTCTTTATTCCTTTCTGATGTCTCAATAAACTTTTGTTGTTCAGAAAGAAAAAGGAACTTCCTTTCGTCATACAAATATTTGGGTATCACTCGCCAGTTTTCTAGTGCTTCAACACAGAATATTTTGGTCTTAGTGAAACATTTGTAATGAAAATGGTATTTTCTTCCTCTACATGTATTGCCTATTATAGCGACTTCCTGTTGCAGCTGTATCAAGTTCCAACCTTCATCCAGAGTATGCAAAAAAAATTGGAGGATCAGATTTTTCCCATGACAGGCAGTCTGGAAAAGAGCTTCAGAATTTCAAGGTTATGCGGTTCTAATCAAGCTCTCACCCTTTCTAAATTTGAATGCTTAAGCATTTGTTCTAATTCTAGCTTGTTGTCCTATCTTTCATTCCACAGGTCTCACCGCAAGAAGCAAGTAGAGCCTCCAATTTCATGAGAGCATCCAAATATGGAATGCCAATTACTGCTAATGGGATACATAGTTTGTTCTCATGGTATGTACTTTCCTTTTGTGATTTTGTTCTGAATTTTTCTTTAGCCATACGTTTGTTCTGGTTTAAATAGCTGAGAGTCCATATTCACTGTTCGTTATTTATCATCAGTGGGCAGGTAGTACCGTCTAGGTGTTTTTCAAGTGGAGCAGGTACCTTCTCTAAAGTCATGACACCTATGCCTAACACTATGTTTGTGTTATAGATTCAGATCCTTCTGTTATAGCATTATGCCCAACTTTAAGTTATATCATAGTTAATATCTTCCTTCGGAGTTTTCAATAGTATTGTTTACTGTCCAGATTTGCCTCCACATCAGGAAATCGGAATGCCTTCACTCTCCCCTACCATGACTGAGGTACAATACTCAACAGCTGAAATTGAATAAATAAATAAAATCATGGCATCATGGCAAAGAGAAAATTAAAGGATGAGCAGTGTCATGTATCTCTTGAGTTGCCTTTATCATGTCAAACTTATTAAATTGCCTGTAGGGAAACATTGCAAGGTGGGTGAAGAAAGAAGGAGATAAAGTCTCACCTGGTGAAGTTCTTTGTGAAGTAGAGACTGTAAGTTACTTTCTTCATGTGCACACCAAGACTTGATTTAATTTCCCTACTTTATTTAATTAAGGAGCAGCAGCAGCTTAACCATCAATCACATTTATGGTGATTAGGATAAAGCGACAGTGGAGATGGAATGCATGGAGGAAGGCTACCTTGCTAAAATTATCCATGGAGATGGTGCCAAAGAAATTAAAGTTGGTGAGGTACATATTCTTGATTTAGAAAAGACACTTTTTCCCTCCATTTAGCCCATGTTCTGTGTTGATATGAACTTGAGTTGCCTTCAATATTTACACATTATTTGTTAACCAGATTATTGCCGTAACCGTGGAAGAAGAGGAAGACATCGGCAAATTTAAGGATTATAAGGCTCCATCATCTGCTGAATCTGCAGCTCCAGCCGAATCGAAGCCCCAATCTGAGCCCACAGAACCAAAAAAGGAGAAAGAGCAGCCAAAGGCTACAAAGACAGAAGAATCTTTTCTTTCAGAGGATCGCACATTCTCCAGTCCAATTGCAAGGAAATTGGCAGAAGACAACAATGTAAGCTTCTAATATTTTAGCTATCCATACGGTTTCCAAAGAACGCAGTTTTTAATTTTGAAACCTTGTTTCCTAAACAGGTACCACTGTCAAGCATAAAAGGTACTGGCCCCGATGGGCGAATTTTGAAGGCAGATATTGAGGATTACTTGGGTATGCAATTGTTCTGTATTTTTATTCATGCTGAAAAAACATCATCTTGATGGTGGCCTTCAGAATTAAGATGCTTATATATAAGAGCCAGATTAAAGCATGATAAGTAATGAATGGTGATAGTTTTACCTATAAAGAGTAGAGTAAGTGGGTTCGGTAATCTAATGATATTTATGCTTAATGAAGCTTCTGTGGCCAAGGGTGCCAAGAAGGAAACAGCAGCAGCTCCTGGACTAGGCTATGTGGATCTTCCTAATACGCAAATAAGGAAGGTAATATCATTGCCACTTAATTTCTTTCAAGGTTTTTGTTGCTGTTGGTGCTCTACTTCTATTAACAGTTTCTGATATTATTTCGTCAGGTTACTGCAAACCGCCTGCTGCACTCCAAGCAAACCATTCCTCACTACTATCTGACAGTTGATACTCGTGTTGACAAACTTATTAAGTATGGTTTCAATCAAAACTTTGTTCAAGCAATTTAGTATTTTATCAACCTGTACCCAAGAACATATTTTGTGAACCTCTGGTTGATTACTAGATGAACCATTTGCTCTTTTTTTTTTTTTGGGGGGGGGGGGGGAGGCCTCGTTTTTGTTTGCACCATATTTTTCTATAGGGTTACTTGACAAGCAAAATTCTTGATTAATTTATGTTCCAGGTTGCGAAGTGAGTTGAATCCTCTGCAGGATACCTCTGGTGGCAAGAAGATATCCATAAATGATCTTGTTATCAAGGTAAATTTTGATGTGATACTCTTCTTTCCTCAAGGCTTAGTTAAGTTTAGACTTGATCAATGCATGCGCAAATCATTCCTGTTCAGACAAACAATTTTCAGAGTTAATATTTTGCATGAGTGGTAGGATGTTTTACCTAAATTATTGTCCAATATGCAGGCCGCAGCATTGGCTCTTCGTAATGTTCCTGAGTGTAATAGCTCTTGGATGAATGATTTTATTCGCCAGTAAGTTATGAGTAATTGATCATTGAGACTGGGATGTTCACTACTACTACTTATGATGTGATGTGCTACATATAATCTCATGCAGATACCACAATGTGAACATCAATGTTGCTGTACAAACTGAGGATGGCTTGTTTGTTCCCGTAATAAGGGTATGCCATTTATTTCCATGGTTTTTTTAAAAAAATTATTCAGCATCTTTAACTTGTATTGTTTTTACAGGATGCTGACAAGAAGGGCCTAGCCACTATCGCTGATGAGGTGAAGCAACTGGCTCAGAGAGCAAGGGACAACAGACTTAAGCCAGAGGATTATGAGGTATAGGCCGAATATATATTTGATTCGATAGTATTTTTCCTTTGACAATTTGGATGCAATGTCTTGCAGGGTGGCACTTTCACTGTGTCAAACTTGGGAGGCCCTTTTGGAATTAAGCAATTCTGTGCCATCGTAAATCCTCCACAATCAGCAATTTTGGCTATTGGCTCAGGTAACATGCTGCCTAAGAATCACGCCATCAGGATCTGCTTATCTATCATGTCTAATGGTCTATGCTCGCTTGAAGCCATTTTGTTATGATGTTTACTTACCACGTCTAGAAATTTGTTGTGTGCACAGCTGAGAAGAGGGTGATCCCTGGAGCTGAGGGTCAGTTTGAAGTTGGTTCGTTTATGTCAGCAACATTGAGCTGCGACCACCGGGTCATTGACGGTACGTTTTGGATCAATTGGCACTACTTGTTGCTTGCTATCTGGGGGAAGGGATTCACCATAGCTTGCTGACGGATTGCCCTTTTCTATTTTCTGGCAGGTGCCATTGGTGCAGAATGGATGAAGGCGTTCAAGGGCTACATCGAGAATCCAACGACCATGTTGCTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022101