BGIOSGA022220

From RiceWiki
Revision as of 13:14, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022220| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022220, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA022220

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022220, complete gene.

LocusTag

OSJNBA0038F22.17

Ensembl Transcript ID

BGIOSGA022220-TA

Ensembl Protein ID

BGIOSGA022220-PA

Length

1922

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:1619728..1621649

Sequence Coding Region

1619728..1619829,1619917..1620215,1620255..1620342,1620424..1620505,1621537..1621649

Genome Context

<gbrowseImage1> name=IndicaChromosome06:1619728..1621649 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:1619728..1621649 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTGGCTATTACTCTCGTGATGAAGAAAGGCCAGGGTATCGTCCTGCAAGAGACACTGAGGCTCTTAACGCTTCCTATGAACGTTTTCTGCGCACTGGGCAAATTCAATCCTATGGAGCTGGAGCTGGAGCTGGACCTGGTGCTGAATCTATTAGGCCTGCGGCAGGTGGCAATGCTGGATACCCAGTTGAGGATCGTCCAATGATGGCTGGTGGGGGCATGGAAGCCAGAAATATTGGCTTTGGTGGTGGGATGCCAGAGCCTCCCCTTCCACCAGATGCATCAAATACATTATTCATTGAAGGAATTCCTACTGATTGTGCACGTCGAGAAGTTTCTCGTATCCTTAAATCCCATGCCTTTTTCTGTCTATCTTTAATCTTTCATTTGCACAAATTCTGCTGGTCCTTCACCTTCCCCCAAGATATCTTCCGACCATTTGTTGGTTTTCGTGAGGTGAGACTTGTAAGCAAAGAAGCAAGACATCCTGGTGGGGATCCAATTCTACTCTGTTTTGTTGATTTTGAAACTGCTAGTCAAGCTGCTATTGCTATGGATGCTTTGCAAGGCTACAAATTCGATGAACATGATCGCAATTCACCCCATTTACGGCTCCAGTTTGCTCGTTTTACTGGCCCCAGGGGAGGTTCAGGACCTGGTGGTGGTCGTGTTAGGCGTTAA</cdnaseq>

Protein Sequence

<aaseq>MAGYYSRDEERPGYRPARDTEALNASYERFLRTGQIQSYGAGAGAGPGAESIRPAAGGNAGYPVEDRPMMAGGGMEARNIGFGGGMPEPPLPPDASNTLFIEGIPTDCARREVSRILKSHAFFCLSLIFHLHKFCWSFTFPQDIFRPFVGFREVRLVSKEARHPGGDPILLCFVDFETASQAAIAMDALQGYKFDEHDRNSPHLRLQFARFTGPRGGSGPGGGRVRR</aaseq>

Gene Sequence

<dnaseqindica>1..102#190..488#528..615#697..778#1810..1922#ATGGCTGGCTATTACTCTCGTGATGAAGAAAGGCCAGGGTATCGTCCTGCAAGAGACACTGAGGCTCTTAACGCTTCCTATGAACGTTTTCTGCGCACTGGGGTATCAAAACCTGTTCTTAACACATACTATATTCAATTCCTTAAACACATTGTCAGCTGACACTTTTTTCTTCTTTTTGTACTACAGCAAATTCAATCCTATGGAGCTGGAGCTGGAGCTGGACCTGGTGCTGAATCTATTAGGCCTGCGGCAGGTGGCAATGCTGGATACCCAGTTGAGGATCGTCCAATGATGGCTGGTGGGGGCATGGAAGCCAGAAATATTGGCTTTGGTGGTGGGATGCCAGAGCCTCCCCTTCCACCAGATGCATCAAATACATTATTCATTGAAGGAATTCCTACTGATTGTGCACGTCGAGAAGTTTCTCGTATCCTTAAATCCCATGCCTTTTTCTGTCTATCTTTAATCTTTCATTTGCACAAATTGTGGGTGTAAATTATTCATAATATGCCTCCATCTCTTAGCTGCTGGTCCTTCACCTTCCCCCAAGATATCTTCCGACCATTTGTTGGTTTTCGTGAGGTGAGACTTGTAAGCAAAGAAGCAAGACATGTAAGTGAGCTTTTTGGTGCTGTCACGCCTGGTCTCTTGTTTCGTTCTTGTTCATCCATCTAAGTGCTTTGCTGTTAACAGCCTGGTGGGGATCCAATTCTACTCTGTTTTGTTGATTTTGAAACTGCTAGTCAAGCTGCTATTGCTATGGATGCTTTGCAAGGTGAGTCAGTGAACTATAGTTTGTTGACACTGAGCCATTTATCACCTTTTGATCTCAAATTTCTTTTGGCTGCGTAATGCCCAATTAAATCTGACAGCTGTGGGTACACCATGTGAAGCTGTTGATCCATCTCTCCTATCAGTGTCTTATGAGTCATGATATTGAACTTGTGTGTTTTCTTCTCTATCTTTTTCCCTGTTTTTAGTTATCTCATTGTCATGCATGCTTATAATTTGGATGCTTTGTTTACCAAGATCTGATAGATGCTTGTGATGGTTGGTAATTTGGGGTATTTTGCTAAAAGCCGACAGTCAGTTTCTTTATGGTTGAATAGAACTCATTCGACTGAAGTATTTGTCCTTAAAATTGGTGTGGAGTTATTGGCCAAGCAGCTAAAAGTGGGCTGTGAAAATCTTGTCTGTTCCTAATTTATCACCTGAACATTTTGCTTCACATTGTTACCATAGCTGTGACTGCCTTTATAATGCGCCCCCCCCCCCCCCCCCCACACACACACACACAAGATGTTATTGCGTTGTCTGGGGACTAGGCCTGTGGAAACACTCTGGCAGAAAATGGCATAGATATCACCATCTATCTATATTACTAGTAGCTCGCTGGTGCTTCTCAAATGGTAATTTCCCCTTCACTTGACAACAACTTTAGCAAGCTATATTAATTCCCAGTACGGTTATGATCCACTTATGATGCTTGTCAATGTATTCTAATTACTGTGATTCCTAATAGGTAGCTGTTAGATCTTGTTTGTAAAAAGGAATAGCTGTTCCATGATCATGTCAGGCATCTATTGCCTATTTTTTGTAGCATGATCAAAGTAATCCTGTCAGTGGCCATCTAAAACTTTTCAAGGTCATGTACGAAAATAGAGTAATTCGCACCTGCAATGAGTTAGTTCTCTGTGGTGTCTTGGGAGTGAGAAATTACATGGTAGTTGACTGGTCATTGAACCGTTCGTTTGATTGCTTAATTTCCATGTTTTAAATCATGAAAATTCATGGTTAATTTTGCAGGCTACAAATTCGATGAACATGATCGCAATTCACCCCATTTACGGCTCCAGTTTGCTCGTTTTACTGGCCCCAGGGGAGGTTCAGGACCTGGTGGTGGTCGTGTTAGGCGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022220