BGIOSGA022340

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Revision as of 13:16, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022340| Description = cDNA clone:J013114C10, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA022340, complete gene.| ta...")
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Gene Name

BGIOSGA022340

Description

cDNA clone:J013114C10, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA022340, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA022340-TA

Ensembl Protein ID

BGIOSGA022340-PA

Length

3097

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3346393..3349489

Sequence Coding Region

3346393..3346633,3347057..3347207,3347344..3347411,3347633..3347703,3347823..3348092
,3348337..3348500,3348603..3348658,3348781..3348833,3348925..3349093
,3349194..3349291,3349385..3349489

Genome Context

<gbrowseImage1> name=IndicaChromosome06:3346393..3349489 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:3346393..3349489 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCCGTTTCATCCCGGCCGTCCGCGGCGAATCCGACGGCGGCCGCGGCGGCGCCGGACGTGGCCGACGGCCGCCGCCGCCGCCGCAGCGTCATCCTCCTCGGTTGCGGCGCGGGGACGGGATGGCGTCCACGCTTTCCTCTCCTTGCCACCACCACCGCTCCTCCTATTATAGCCACCAACTCCGCCGCCGATGCCTCCGCCTCCGCCCCTCCACCGCCGCCTCCGGCCGGCCGTCAGGACTTGACACTGGTAGAGAACTTTATTCCCATCCAACGTTCATCGCTGGGGGAAGCCGTAGCCGTGTGTCGCCTTCATCTTTCATGGAAAAATCCCAAAGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCATTGCAAGCCCCAGTGACTGGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGACAATTTTTTCATCTATGCTAGTTCGTCAAACATCTACACCAAAACTTTCGATGGGATTGATGTTGCTGGAAGAAGGTTAGCAAATGAAGTATTGGATGTGATTCAGAAGATGGCTGGATTGAGAAAGATTTCCTTCCTAGCACATTCTTTGGGTGGTTTGTTTGCGAGATATGCTATTTCTATCCTTTATTCAACAGCAATGAAGGATGCAAGTCAAAGTGCTGCTTGTATAGCTCCTACAACTGAAGGGTCTGAAAAGTTGGAATGCACTTCAGGATTAGGTGCAATTGCTGGGCTGGAACCAATTAATTTTATTACCTTAGCAACCCCACACCTTGGTGTTAGAGGGAAAAATCAGCTTCCATTTCTTCAAGGACTATCTATTCTAGAAAAGATTGCTGCACCTTTGGCTCCCTTGGTTGTTGGCCGCACTGGTGCCCAACTCTTTCTCACGGATGGTGAACCTAGCAAGCCACCTCTTTTGCTACAGATGGCATCTGATCATGAGGATAAAAAATTTATATCTGCTCTAGCAGCTTTCAAGAACCGCATTTTGTACGCTAATGTTTCGTACGACCATATGGTCGGATGGCGAACATCTTCAATAAGAAGAGAAAAAGACCTTACAAAGCCCTCACATCGTTCACTGGATGGCTACAAGCACATTGTGAATATGGAATATTGTTCGCCTATATCATCTGATGGCCCTCATTTCCCTCTGCAAGCTGCCAGAGCCAAAGAAGCTGCACAGAGTAGACCAAACAAAGAAAACACTAAAGAATATCACCAAATGATGGAAGAGGAGATGATCCATGGCTTGCAGAGGGTCGGTTGGAAGAAAGTAGATGTCAACTTCCATACAGCACTATGGCCTTACTTTGCTCATAACAACATACATGTTAAGAATGAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCCCATGTGGCGGACAGCATAAAACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAA</cdnaseq>

Protein Sequence

<aaseq>MSRFIPAVRGESDGGRGGAGRGRRPPPPPQRHPPRLRRGDGMASTLSSPCHHHRSSYYSHQLRRRCLRLRPSTAASGRPSGLDTGRELYSHPTFIAGGSRSRVSPSSFMEKSQRKRGPDHLLILVHGIIASPSDWTYGEAVLKKRLGDNFFIYASSSNIYTKTFDGIDVAGRRLANEVLDVIQKMAGLRKISFLAHSLGGLFARYAISILYSTAMKDASQSAACIAPTTEGSEKLECTSGLGAIAGLEPINFITLATPHLGVRGKNQLPFLQGLSILEKIAAPLAPLVVGRTGAQLFLTDGEPSKPPLLLQMASDHEDKKFISALAAFKNRILYANVSYDHMVGWRTSSIRREKDLTKPSHRSLDGYKHIVNMEYCSPISSDGPHFPLQAARAKEAAQSRPNKENTKEYHQMMEEEMIHGLQRVGWKKVDVNFHTALWPYFAHNNIHVKNEWLHNAGAGVIAHVADSIKQQESRKYFRANL</aaseq>

Gene Sequence

<dnaseqindica>1..241#665..815#952..1019#1241..1311#1431..1700#1945..2108#2211..2266#2389..2441#2533..2701#2802..2899#2993..3097#ATGAGCCGTTTCATCCCGGCCGTCCGCGGCGAATCCGACGGCGGCCGCGGCGGCGCCGGACGTGGCCGACGGCCGCCGCCGCCGCCGCAGCGTCATCCTCCTCGGTTGCGGCGCGGGGACGGGATGGCGTCCACGCTTTCCTCTCCTTGCCACCACCACCGCTCCTCCTATTATAGCCACCAACTCCGCCGCCGATGCCTCCGCCTCCGCCCCTCCACCGCCGCCTCCGGCCGGCCGTCAGGTTCATCGATCGCCCGCCCTTCCATACTCATTCCTTGTATATTTCATTGATTTTGGGGGGAAAGATTGGATTACCGGTCATATTTGATCCATTTTATGTGTGTACCTCAGGATCTGCACTAGAAAATAGTATGATAGATAAAGAATTGGTTATCCAGTAGATAACTTCGTTGATCTTTTGCGCGTTTGAGAAAAAAAACTTCGTTGATCAATTGACGTCAATTTTTATTTTTATTGCTAATGGAGAGGAATCTAGGTGATATTAACTTGTTTGTTTCTAGCAACATGAGGGCACAAGATCTCTTTCAGTTTCGACACAACCAAATGAGCATCCAAAGTAACACTACTGTACTTAGTATCGCGATGTTCTTCAAATGCTGTGTTAATGAAAATGAAATAGTGTGCTGACATTTGATTCTTGCAGGACTTGACACTGGTAGAGAACTTTATTCCCATCCAACGTTCATCGCTGGGGGAAGCCGTAGCCGTGTGTCGCCTTCATCTTTCATGGAAAAATCCCAAAGAAAGCGAGGACCAGATCATCTGCTGATTCTTGTCCATGGTATCATTGCAAGGTGAGTATATCCTGTCATGATAACATAGCACCTGTCTGAAAATGCATAGCAAGATTGCAGTGCTAGTTGTTCCTGTCACCATTCTTTCTTGAGCTTTGCCGATAAATTTCCTTCATTGTTCTCCCTTTTAATGCAGCCCCAGTGACTGGACCTATGGAGAAGCAGTGCTAAAGAAGAGGTTAGGTGACAATTTTTTCATCTATGGTAGGTATGGCATGTAGGGATCACCTGCCCATTCCTGTTGTCTTTCTGACAAAATTGAGGTTAGGATCAGATGTACAGACTACAGAATACCTATATTTTTAATTAGTACTGCAAGATGAAATTCACACCACTTCATTACTGTAGCTACATTGGTTTGCACTTTGCAAATGAGAGCAATTTGTTTCTAGCCATAAAACTTACAGTGAACTATATCATTGCAGCTAGTTCGTCAAACATCTACACCAAAACTTTCGATGGGATTGATGTTGCTGGAAGAAGGTTAGCAAATGAAGTATGTACTCGCTAGTTAGTCCTAGCAAAAGGTTTCAAGTATTCACCTTTGTAGAAACTGTTGTCTGCACTCATGGCTGCGCTTAAGAGGGCTCTGACGAAAATCCGCTATCGAAGCAGGTATTGGATGTGATTCAGAAGATGGCTGGATTGAGAAAGATTTCCTTCCTAGCACATTCTTTGGGTGGTTTGTTTGCGAGATATGCTATTTCTATCCTTTATTCAACAGCAATGAAGGATGCAAGTCAAAGTGCTGCTTGTATAGCTCCTACAACTGAAGGGTCTGAAAAGTTGGAATGCACTTCAGGATTAGGTGCAATTGCTGGGCTGGAACCAATTAATTTTATTACCTTAGCAACCCCACACCTTGGTGTTAGAGGGAAAAATCAGGTGGGTCTCTAAATCTATTAAATTATCTGATATTTTTTTATTCCCCTCAAAATTAGTTATGCTGGAAGCAAAAACTACTATATTGGACTTTGAGTTGCCTAGTAAGATTTTAGGATAAATTTATTGTTGCATAGCTAATCGGAGGCCAAAGACCAGTAACCAACTACTACTTCTGAATATGTTGTGACTTGTTATTTGTGATCAATGTATTAACTACATGCATTTTCTGCAATAATATTACCAGCTTCCATTTCTTCAAGGACTATCTATTCTAGAAAAGATTGCTGCACCTTTGGCTCCCTTGGTTGTTGGCCGCACTGGTGCCCAACTCTTTCTCACGGATGGTGAACCTAGCAAGCCACCTCTTTTGCTACAGATGGCATCTGATCATGAGGATAAAAAATTTATGTAAGTCATAAGAAAGGTCTTAAGGCTAACTTATTATAGTAGAACATATCTTCTTCGTTCAAAGATTGTAGTAGAACATATCATTTCTTCAATGTTCCTCAGATCTGCTCTAGCAGCTTTCAAGAACCGCATTTTGTACGCTAATGTTTCGTACGACCGTATCCTTCCTTACTCCTAGTTAGTACCACATGATTTCCTCTGCCTGATATGCAAACGAAATTTTTTTTTGCTCCAAAGCATTTTCTATTTTGCTGTTCTTGTTTTCTTGAACATATGCCAGATATGGTCGGATGGCGAACATCTTCAATAAGAAGAGAAAAAGACCTTACAAAGGTGTTCAATGTTCTCCACTAGGATTTGATTAGAAACCAAATTGCAGCACTGTGTGAATACTTCAGTAATATTTTTCCTCCTCCATATGCAGCCCTCACATCGTTCACTGGATGGCTACAAGCACATTGTGAATATGGAATATTGTTCGCCTATATCATCTGATGGCCCTCATTTCCCTCTGCAAGCTGCCAGAGCCAAAGAAGCTGCACAGAGTAGACCAAACAAAGAAAACACTAAAGAATATCACCAAATGATGGAAGGTGAGTAGGACCTTTTTCAGTAGACTAGTACTATGTGCTGGATCTTGATGTCTCCCTTGTTTCTCACTCTATGAACATCAATTCTGTGTTCTGGTAACAGAGGAGATGATCCATGGCTTGCAGAGGGTCGGTTGGAAGAAAGTAGATGTCAACTTCCATACAGCACTATGGCCTTACTTTGCTCATAACAACATACATGTATGCTAGTTAGTATGTACTGCATATCATTCTGACTGTTGTATATGTTTTCTTTTCATTTCCACTGGATTTCATGGCATCAATGCAATGCAGGTTAAGAATGAGTGGCTTCACAATGCCGGTGCCGGCGTCATCGCCCATGTGGCGGACAGCATAAAACAGCAGGAGTCACGGAAATATTTCCGTGCCAACTTATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022340

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA022340&oldid=44865"