BGIOSGA022342

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Revision as of 13:16, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022342| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022342, complete gene.| tag = P0046E0...")
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Gene Name

BGIOSGA022342

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022342, complete gene.

LocusTag

P0046E09.3

Ensembl Transcript ID

BGIOSGA022342-TA

Ensembl Protein ID

BGIOSGA022342-PA

Length

1910

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:3394373..3396282

Sequence Coding Region

3394373..3394390,3394720..3394863,3394968..3395195,3395407..3395520,3395782..3396282

Genome Context

<gbrowseImage1> name=IndicaChromosome06:3394373..3396282 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:3394373..3396282 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACTGGTCAGTCAAAGTTGCCGGTCAGGTACCCAATGGGCCAAACTCAACAAATCAAAAGTCTAATAATGGTCCTTCCTCTAGTAGTGACCCTGAAGACAATGCAGCACTAGAGGAATGGGCAGCTACTCGAATTCAAAATGCCTTTAGATGCTACAAGGCAAAGAAAACTCTCAGATGTCTCAAGGGGGTTAAAAGATTGCACATTATTGGGCAGACCAATCCAGTTAACAAGCAGACAGCTGCCACATTGAACTACATACAGTCTTGGAACAAGTTGCAGGCAGAGATAAGAAACCGGCGTGCCTTCATGGTCACTGAAGGGCGCAATAGGAAGAAGAAGCAAGAAAATCAAATGAAACTTGAAGCAAAACTCCAAAATTTGCAGGTCGAGTGGAATGGAGGCTCGGATACTATGGAGGAAATACTTGGGAGGATCCAACAAAGGGAAGAAGCCGCAGTAAAGCGTGAACGAGCTATGGCATATGCATTCAATCATCAGTGGAGAGCAAGGTCTGCCACAAGTCTTGGAAACTTCAACTATGAAGTTGGCAAGGGTGGCTGGGGTTGGAGCTGGATGGACCGATGGATAGCGGCACGGCCATGGGAGCCCCGATCACTGGTCCACCCCGAAAACCTGAAGAAAGGACAGGCAAAGAAGGAAAATGCCAGCACAAACCCATCAGCTCTGAAGCTGCAAGGCTCAATCAGTCTAAGCAACAACATCAATGATCGAAAAGCCCCTAAGAAGAAGTCATCACCATCTCCCCCTGATCAGAAGAAACCGGTAGCAGCATCTCCTCCTGATCAGAAGAAACCGGTAGCACTGTCTCCTCCTGATCATAAGAAAACCGTAACACCATCTCCTCCTGATCAAAAGAAACCGGTAGCAAGGGTGCAGAAGGCAAAGGCAGCTGGTCCTCCAAAGGCAAAGCCCAAGGACATGAAAGGGGGCCAACAGAAGAAGCAACAACAACTAGAGGTTCCTTCGCTCAGTGTGTAA</cdnaseq>

Protein Sequence

<aaseq>MDWSVKVAGQVPNGPNSTNQKSNNGPSSSSDPEDNAALEEWAATRIQNAFRCYKAKKTLRCLKGVKRLHIIGQTNPVNKQTAATLNYIQSWNKLQAEIRNRRAFMVTEGRNRKKKQENQMKLEAKLQNLQVEWNGGSDTMEEILGRIQQREEAAVKRERAMAYAFNHQWRARSATSLGNFNYEVGKGGWGWSWMDRWIAARPWEPRSLVHPENLKKGQAKKENASTNPSALKLQGSISLSNNINDRKAPKKKSSPSPPDQKKPVAASPPDQKKPVALSPPDHKKTVTPSPPDQKKPVARVQKAKAAGPPKAKPKDMKGGQQKKQQQLEVPSLSV</aaseq>

Gene Sequence

<dnaseqindica>1..18#348..491#596..823#1035..1148#1410..1910#ATGGACTGGTCAGTCAAAGTAATTTGACTGTTGAATTGATCTCCTTGGTAGCTTTTTTTTTTGTACATCGATTTACAGACAGAATCTGGCCTAATTATCTCTCAGCTTCTTTCTTGTAGTACTAGTGTAGTTTTTCTTTCCGTGGGATTGTCTTACCGGCTACAGTGCATAAACATAATCTGATTGTACTTCTTGTACCTTTAAACTGCCTCTTATTGAAATGGCATAGCTTCTGCCCTTTGTATTTAAATGATTACATTATGGCTTAGGACATCTGTACATTTACTTAGATGAACTAACCGTCAAATTGACCAACTATTTTCCTCTATTTTGCTTTGGCATTGAAGGTTGCCGGTCAGGTACCCAATGGGCCAAACTCAACAAATCAAAAGTCTAATAATGGTCCTTCCTCTAGTAGTGACCCTGAAGACAATGCAGCACTAGAGGAATGGGCAGCTACTCGAATTCAAAATGCCTTTAGATGCTACAAGGTAACATTGATTTGAATTGTTTCCTTCATTTTGGCTACCACATGAGTTTTCGGTTGCTAAGAAATTGGCACATCATTTCTTGCCGTTTCGTCACTCAAATGCAGGCAAAGAAAACTCTCAGATGTCTCAAGGGGGTTAAAAGATTGCACATTATTGGGCAGACCAATCCAGTTAACAAGCAGACAGCTGCCACATTGAACTACATACAGTCTTGGAACAAGTTGCAGGCAGAGATAAGAAACCGGCGTGCCTTCATGGTCACTGAAGGGCGCAATAGGAAGAAGAAGCAAGAAAATCAAATGAAACTTGAAGCAAAACTCCAAAATTTGCAGGTGAATTTCTCCTAAAGGACCACCATTCCTTGTAAATTTTTCTGCCTACCTAATTATTGTTGGGATTTTTTTGGTCATAACCTACCCTTAATCCTTTAACTGATTAAACAAATCAACTATATTTTGTATTAATAATATTAAATTTACTAGTAAAAGAATACTAATGTTCTTTGACATTGCATTTCCTTTTGGCATCGGCATGTTTTAACAGGTCGAGTGGAATGGAGGCTCGGATACTATGGAGGAAATACTTGGGAGGATCCAACAAAGGGAAGAAGCCGCAGTAAAGCGTGAACGAGCTATGGCATATGCATTCAATCATCAGGTACTAACAATTGATTCAGGTGTTACAACTTCATTCATTGTTCATTCCTTTAAAAGAATCCTACGTATTGCAGCACATTATATCTATGATTTTGATCTTATATATGACAGAGACTCCTAAGCTAATTTTCATCATGTCTTTTCCCCTTAGGAATAGTTTCTTTCCATGCTACTTACTAGTTAATTCAGACTAGCACTATGCTCATTTCTCTATGTATAAACTCAACATAGTAATCGGCATATTCATTCTGCACATTTTCAGTGGAGAGCAAGGTCTGCCACAAGTCTTGGAAACTTCAACTATGAAGTTGGCAAGGGTGGCTGGGGTTGGAGCTGGATGGACCGATGGATAGCGGCACGGCCATGGGAGCCCCGATCACTGGTCCACCCCGAAAACCTGAAGAAAGGACAGGCAAAGAAGGAAAATGCCAGCACAAACCCATCAGCTCTGAAGCTGCAAGGCTCAATCAGTCTAAGCAACAACATCAATGATCGAAAAGCCCCTAAGAAGAAGTCATCACCATCTCCCCCTGATCAGAAGAAACCGGTAGCAGCATCTCCTCCTGATCAGAAGAAACCGGTAGCACTGTCTCCTCCTGATCATAAGAAAACCGTAACACCATCTCCTCCTGATCAAAAGAAACCGGTAGCAAGGGTGCAGAAGGCAAAGGCAGCTGGTCCTCCAAAGGCAAAGCCCAAGGACATGAAAGGGGGCCAACAGAAGAAGCAACAACAACTAGAGGTTCCTTCGCTCAGTGTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022342