BGIOSGA022413

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Revision as of 13:17, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022413| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022413, complete gene.| tag = P0015E0...")
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Gene Name

BGIOSGA022413

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022413, complete gene.

LocusTag

P0015E04.37

Ensembl Transcript ID

BGIOSGA022413-TA

Ensembl Protein ID

BGIOSGA022413-PA

Length

3679

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4489826..4493504

Sequence Coding Region

4489826..4489980,4490070..4490133,4490223..4490272,4490357..4490547,4490731..4490791
,4490923..4490995,4491328..4491451,4491532..4491619,4492054..4492104
,4492712..4492783,4493277..4493389,4493482..4493504

Genome Context

<gbrowseImage1> name=IndicaChromosome06:4489826..4493504 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:4489826..4493504 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGACGCTGGCGAGCGCCATGCGGCGGGAGAACCGCCGCTTCAAGCCCCCCTCCTCCTCCTCCGCCTCCGCCTCCGCCGCCCTCTCCTCGGGGAGGGTCCCCCTCGTCATGGCCTTCCTCTCCTGCCTCGCGTGGCTCTACGTCGCCGGCCGGCTGTGGCAGGACGCGCAGACGCGGATGATCCTGTCTGGTCTCCTCGAGAAGAGCTCCGGCAATCTTCCGAAGGTGCTGTCGGTGGAGGACAAGCTGAGGAATCTAGGATGCATTGGAATTGGGAGGAAGATTGCGGAGGCAGAAATGGACCTTACAAAGGCGAAGAGCGAGGGGTATCTGTGGGGGAATGGAACTGCTACTGGTAGTTCTGACAAGAAGAAGCTCCTTGCTGTTATTGGAGTTTACACTGGTTTTGGTTCCCGGCTCAAGAGGAACACCTTCCGTGGCTCATGGATGCCGAGAGGTGATGCTCTGAAGAAGCTTGAGGAGAAGGGTGTGGTCATTCGTTTTGTCATTGGTCGGAGTGCAAATCGAGGTGATAGCTTGGACCGCAACATCGATGATGAAAATCGTCGGACGAAAGATTTCTTGATTCTTGAAAGTCATGAGGAAGCTGCAGAGGAGTTACCAAGCAAAGTTAAGTTTTTCTTCAGTGCAGCAATTGAAGCTTGGGACGCAGAGTTCTATGTGAAAGTCGATGACAACATTAACCTTGACCTGGCTGGATTAATTGAGATGCTTGAAGCCCGTCGAGGTAGCCAAGGACTGTACATGGGTTGCATGAAATCAGGAGGTGTTGTAAGTGAAGAGGGTCAACAATGGTATGAACCTGAATGGTGGAAGTTTGGAGATTCAAAAACGTATTTTCGCCATGCTTCCGGTGCTTTGTTTATCCTCTCTAACAATTTGGCACGCTACATTAACATAAACAGTGCATCGCTACAGAGCTATGCCCATGATGACATATCAGTAGGTTCATGGATGATGGGGCTGAATACTACTTATGTTGATGACGACCGTTTGTGCTGCGGCAGTTCTAGACAAGAGAAAGTATGTTCCCACGCATGA</cdnaseq>

Protein Sequence

<aaseq>METLASAMRRENRRFKPPSSSSASASAALSSGRVPLVMAFLSCLAWLYVAGRLWQDAQTRMILSGLLEKSSGNLPKVLSVEDKLRNLGCIGIGRKIAEAEMDLTKAKSEGYLWGNGTATGSSDKKKLLAVIGVYTGFGSRLKRNTFRGSWMPRGDALKKLEEKGVVIRFVIGRSANRGDSLDRNIDDENRRTKDFLILESHEEAAEELPSKVKFFFSAAIEAWDAEFYVKVDDNINLDLAGLIEMLEARRGSQGLYMGCMKSGGVVSEEGQQWYEPEWWKFGDSKTYFRHASGALFILSNNLARYININSASLQSYAHDDISVGSWMMGLNTTYVDDDRLCCGSSRQEKVCSHA</aaseq>

Gene Sequence

<dnaseqindica>1..155#245..308#398..447#532..722#906..966#1098..1170#1503..1626#1707..1794#2229..2279#2887..2958#3452..3564#3657..3679#ATGGAGACGCTGGCGAGCGCCATGCGGCGGGAGAACCGCCGCTTCAAGCCCCCCTCCTCCTCCTCCGCCTCCGCCTCCGCCGCCCTCTCCTCGGGGAGGGTCCCCCTCGTCATGGCCTTCCTCTCCTGCCTCGCGTGGCTCTACGTCGCCGGCCGGTACGTACGCGCGCCCGCGCGCTCAGATCCGGGGGGAATTTCCGTGGAGTTTTCTGATTGTTTCGTTGATTGGATTTTTTTTTTTGCAGGCTGTGGCAGGACGCGCAGACGCGGATGATCCTGTCTGGTCTCCTCGAGAAGAGCTCCGGCAATGTGCGGATCTCTCCCCCTCTCCACCCACTTCTCGTTTTTTTTTTCCGCTTGATTTGTCAGTTCGTGTGATGGTATCGCCTAAATTGCAGCTTCCGAAGGTGCTGTCGGTGGAGGACAAGCTGAGGAATCTAGGATGCATGTAATTCCCCCCTCTCTCTCTCTGAAGAGGAATTCAGAATTCAGAATTTTAGTTGCTGATTTGAAATGGGTTGTTTGGTGGCAGTGGAATTGGGAGGAAGATTGCGGAGGCAGAAATGGACCTTACAAAGGCGAAGAGCGAGGGGTATCTGTGGGGGAATGGAACTGCTACTGGTAGTTCTGACAAGAAGAAGCTCCTTGCTGTTATTGGAGTTTACACTGGTTTTGGTTCCCGGCTCAAGAGGAACACCTTCCGTGGCTCATGGATGCCGAGAGGTTCGCTGTTCTTGCTCTTTTAGTTTCCAGTTTACGGCGATAAAATGTGTGCGCCCTGATAACATTTGGTTGGAATGCAGCTTCATTTTTTTTTCTAATAGCTATTGCTGATGCAAACTATGTTACTTATAAGGTTTCAACTACAGGAGTATAATTGTTCTTTTACCTCACTGTAAATTTCAGGTGATGCTCTGAAGAAGCTTGAGGAGAAGGGTGTGGTCATTCGTTTTGTCATTGGTCGGAGGTTTTATTCTGGATCCATATCTCTTATATGTAGCATCTCTAGCACCTTAGACAATCATTCGCCCCATATCATTCTCAGGCTTTTCTTCATGTTTAGTTTTCCTACTGAAATTGTTCTGTTTGGTCCTTCAGTGCAAATCGAGGTGATAGCTTGGACCGCAACATCGATGATGAAAATCGTCGGACGAAAGATTTCTTGATTCTTGTAAGGATCTAATAACATTTAATATCATTTTTCCAATTTGTCCTTCACAAAAAATTAGTACTGTAGTACATGCAGAAGACTTTTGGCTTTGCTTGGTTGTTTTCTGGCATGGAAGACTATCTTACATTCTCGTCCGTATTGGGCCTTCAATTCAGTACCTATTTTAAGTTATCTCACTGTCCTGATTCATCTAAATGTCGGTTTTTAATTTGACATTTGGATATACAGCTTAGATCAAAACCATTTTTGTGACATTGTCAAATCTTGAACAAACTGCTTGCACTTTATGGAGAACAGAATGTGACATAAATAGTCAATAAATTGTCACACAGGAAAGTCATGAGGAAGCTGCAGAGGAGTTACCAAGCAAAGTTAAGTTTTTCTTCAGTGCAGCAATTGAAGCTTGGGACGCAGAGTTCTATGTGAAAGTCGATGACAACATTAACCTTGACCTGGGTAATTCCTTTTCTGTTGAAACATTACACCTATGGCTTATTTCGGCTTAATGTTTTGACTCATTACAATCTATATATTAGCTGGATTAATTGAGATGCTTGAAGCCCGTCGAGGTAGCCAAGGACTGTACATGGGTTGCATGAAATCAGGAGGTGTTGTAAGTGAAGAGTATGTGCTTTCATTCCCATCATCAGTAGGTTTTTATTTATTTAGATTTTAGACAACATGCATGGCATATGTTAACACCAACTAGACCATCCATTTCATAAGAGGTACCATTTGTTTTCCTTGCGGATCCATTTAGCAGTGATGCTTCCATGCTGACATCCTTCCATCTTTGAAAGCTATGTAAATGTAGTGGAATGCATTGAGCATCTGAAACGTTTGGTCCAATCAAGGAATCATAGCTTTTGAATTGCTTAGTCCCATTATTTACCTTAGGTGCTACCATTGCTTGATATCGAGAAAACATGTACCTTGCACACTCTTAATTGCATTGCATCATTTATATATTCAGGGATAATATTTCATTCAGTACATTGGATTGCTTTGCCCTTTGTTAACCCGTCATTGAAGCCACTTGATACCAACTTCAATTTCAGGGGTCAACAATGGTATGAACCTGAATGGTGGAAGTTTGGAGATTCAAAAACGTGAGTAAACTAACATATTCAAGGTCCTTGCCATTTGTCTATTATCCTAATATTCATCTTAGTGTTGGGTGATTAGCAATAATTCTGTGTCTAGTGGTGTTCTTACATGTTTTATGGGCATTATTAATGAAGCACCGATCTCATGTTCTTTCTTAGTATTTGGATTTCTGAGTCTAATGCTACATTGAGGCTACAAACATTTCAACCTCCTGATAGTGAGTTTCAGCCTTCAATGCAAACCTAAGAATGATTTTTTTTTTCATATTACCAACTACTCGTATAACCTTGCATGGCTTGCAGCGGATGATGTCATTATAACTACTTTTTCATGCTAATAGCGGTTTCTCCTTGATTCACAAATGGTTTACGAGTCTTAAAGATCTGGTGAAGCCCATCTGTTTTATATTTAGACTTAATTTGCATTGTGCTTGTAATTTCTATTTGTTTGGTGAAGGAATACGCCTAGTTTAAATAGATGTGTTTCCTGGGTGATACTAGTATCTATGAGAAGTGTTCTCTGCTGTTTCTTCAGCGTTTTCATTCTCTGGCTCCTTCAACTTTCTAGTATATCACTTTTTTTCCGTTCACTGTGATTTTTAATTCTCAGGTATTTTCGCCATGCTTCCGGTGCTTTGTTTATCCTCTCTAACAATTTGGCACGCTACATTAACATAAACAGGTAAGTGGTGCGCATCCACCTGTTTTATCTTTGAGTCATGCTAAGCTAAACCAGTTTTGGTGACCAACCAGGCCCCTCTGAGCAATTGCAGTGCATCAGTTCAATTAATACAGAATAAATGTTGCAATTAGGATGATGTTTTCTTGGTGGTCAAACGACAAATTAGTTTTTTGTTACATGAGTCTTCTCCTGTATATGTGATTTACAGAAAACAGGCTATATTCGCTGGATTTCATATAAGTTACTAATACTGTCTTTAGCATTTATGAATTAATAACCGGCCACTGAAATGCTGTTCTGACTAACTGATATATAAATGTTAGCCATCTGCCATCTATTTGATGGTCTTGATGATGCAGGAACACTGTCCAGATGTTCTTTGTCAATAATCAATAATACAACAGTAACCAATTGATATCTCTAGTCAATATAGGAGTATATGCAGTCAAAATTTGACCGAAATTTGAGCAATTTGTTTCTCTTCGATATGCAGTGCATCGCTACAGAGCTATGCCCATGATGACATATCAGTAGGTTCATGGATGATGGGGCTGAATACTACTTATGTTGATGACGACCGTTTGTGCTGCGGCAGTTCTAGACAAGGTAAAAGCTCGCCTCCTGAATCCATTATCCTACCCTGGACAATTCATGGCGGTACTTCTATGCTAATGCTGTAATTCTGCTGCCGTATGCAGAGAAAGTATGTTCCCACGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022413

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA022413&oldid=44938"