BGIOSGA022626

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Revision as of 13:20, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA022626| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA022626, complete gene.| tag = OsJ_208...")
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Gene Name

BGIOSGA022626

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022626, complete gene.

LocusTag

OsJ_20812

Ensembl Transcript ID

BGIOSGA022626-TA

Ensembl Protein ID

BGIOSGA022626-PA

Length

4095

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:8727700..8731794

Sequence Coding Region

8727700..8728661,8728765..8729000,8729106..8729185,8729661..8729756,8730679..8731576
,8731667..8731794

Genome Context

<gbrowseImage1> name=IndicaChromosome06:8727700..8731794 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:8727700..8731794 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATTCGCTTCAGAAGTCCCACGATTTGTGCCTGAAGCGCAAGCTTGTTGATGATTGCCTGTCGAAAGACTTCAAGTATCGCCGCGTCGAAGAGGATAATGTATCTTCCAATGTGGAGAGCAGGCCCTTACCCGGTTCACCTTCTCAGAGTTGCTGCATTCAACCTAATCTGGCTAAAGATTGTGTTAATTACCTGAAAAGCGGGTTGCCAAGTCGCATTGCATTTTACAAACAAGGTGCATGGTGTGATTTCCCTCAGAAAATAATGGAGTCCCTTGTTGAGGGATTCAAAGCTGATAAATCTAGTGCTGTAGTTGTGATGGATGATCAGCCTCTGCTTGTTGATTTCTTGTCGATGACCATGGTGAACCTAAAAACAAGAAAGCAGAGATCTGTCTCATGGCTAGATGGCACTGGCAAGTGGTTTTTTCCTTCTGCATACTTTGACGAGGGCNGTGATGAATCCAGAAAATTAAACATGGGTTCTGAAGGCAGCGGACAAGGTCTAACTGAGGGGATGGTTCCAAAGGCTCCAAATGAACTGGTGAAGCAAGCTGTCGTTGAAACTAGCTCTCCAGTTTTACAGAATTCTTGTATTCCTGACATATTACGCAAGAAGATTGTGCCTGTTGAAAGAGGCAGTGAGAGCTTTCAGTTGGTTCAGAACCTTTTCCTCTCTGGCATGGGTTCATTTGCATCACCTAAAAACTTACTTCATATTCATCGGTACTCTGCAGAGGATGTCACAGCACAATGTAGACTTGAGTCTTTTGCAAGACAGATGAGGTTGACGAGAAAGAAAATTGGTTATGCTGATGTGAGATATGGATGGCTTGGATCTAGGAAGCAAGACATAGTTGGAGTTTTGATTAATGGTTTTATTAGCACTGGACAAACAAGTCACAGTTCTGATATGCGTACTGGTGTGTATCTCTCGCCTGAAAACCGTGCATTTACCAGTGTTGGTCTCTGTGATGTTGATGAAAAAGGAGTTCAGTACATGTTGCTGTGCCGAGCAATATTGGGCAACATGGGAACTATAAAACCAGGATCACAGGATGAGTTTCTAAGCATATATGATTCTGGTGTTGACAATTGCTCCAATCCAAGCTATTATGTGATTTGGCCATCAAAGCTAGGCACTCATATTTCTCTGGAATATCTCATTAGTTTTAGGCTCACACCAGAAATTCAAGACTACTTGCTTCACTTGAAGGGTTTATGGTTGTGCCCACCACCAAAAGAAGTGGAAGTGGATCTTTCTACTCTTCAACCTGAAAACAAGATTACTCGTGAGGAAATGGTCAAGAAAATTATCATAATAGTTGGAGAGCAATTGCTTTTGGATTCCTTGACGAAACTTAACTACAATCCGTCAGAATGGTACAAGTCTTGTTCAGAAGTTAACTGTCATCCTTTAAGTATAAAACTGGATCCTATCTCCAACAGTAGAATTAACATAAACTCTGCATCTGGAAGAGCTAGCAACGATTCTCAAGCACCAAGTGTACAACCTCAGAAATGTGGACCTGTGGATTCTACAGTAGTAAGCATGGCCCTCAAAAGAGAACAATTCTCCATCCCAAGTATGTGTTCTGAAAGCTTTTCATCCCATTGCACAAAAAGTCAGGATTCTGTTGTGAGGATGAGACCCGATGACACCCTTGTGAGGAGGGCATTAATCAGTGATAGTGTTAATGGCTGTGATTCTGTTGGACCAACTGTTGAATCGCATTGCCATTCTCTCCTTTCGCAGAATTTTGACTCTGAAGGGCATGCTTCTCATGTAGTATCAATGTTTGGAAACTCTGGAGCAAGACTACATTCTAGTGCACCATGTATGACAACTGAAGCCCAGGTGTTTGTTGCACCAAGTAGAGCATATGAGAACTCATCATCTCTGAATGCTGAAGGCAGTGATGCTGTGATTTCAAGCATAGCCCCTCAAGTCCACGCACCAAGTATTCCCCCTCAAAATTGTCCACGAACGAGTGTGGCACCTCACCTCTGTTTACCAAGAAGTATGGCGCCCCACCTCCGTGTACTGAGAAAGATTTCTAAGGTTCATTCAACAAACATGCCTGAAGCTCACTATTCCAGTGCAGCAACTATGGTTCCTGTCATCTGTAAACCTCCATTGTTTGGCATTACCCAAAAAGGGCATGGTGTTCATACATCAAGTATGATGTGTACAACACCAAATGTAGTTCTCCATGGTCCTGATCACCCTGCAAAGTTGGCAGATACAGAGCGTAATGCTCCGTCACTAATAAATGGGGCGTTGAGAAGAGAGGTACAAGTACAACGCCCCAATCAAGGTGTTGATGCTAGTAGCATCATCACCCAAGCAGCAGATACACTCGTGGCGTTATCAGCCCACGGTGAGAAAGGCTGGTAG</cdnaseq>

Protein Sequence

<aaseq>MDSLQKSHDLCLKRKLVDDCLSKDFKYRRVEEDNVSSNVESRPLPGSPSQSCCIQPNLAKDCVNYLKSGLPSRIAFYKQGAWCDFPQKIMESLVEGFKADKSSAVVVMDDQPLLVDFLSMTMVNLKTRKQRSVSWLDGTGKWFFPSAYFDEGXDESRKLNMGSEGSGQGLTEGMVPKAPNELVKQAVVETSSPVLQNSCIPDILRKKIVPVERGSESFQLVQNLFLSGMGSFASPKNLLHIHRYSAEDVTAQCRLESFARQMRLTRKKIGYADVRYGWLGSRKQDIVGVLINGFISTGQTSHSSDMRTGVYLSPENRAFTSVGLCDVDEKGVQYMLLCRAILGNMGTIKPGSQDEFLSIYDSGVDNCSNPSYYVIWPSKLGTHISLEYLISFRLTPEIQDYLLHLKGLWLCPPPKEVEVDLSTLQPENKITREEMVKKIIIIVGEQLLLDSLTKLNYNPSEWYKSCSEVNCHPLSIKLDPISNSRININSASGRASNDSQAPSVQPQKCGPVDSTVVSMALKREQFSIPSMCSESFSSHCTKSQDSVVRMRPDDTLVRRALISDSVNGCDSVGPTVESHCHSLLSQNFDSEGHASHVVSMFGNSGARLHSSAPCMTTEAQVFVAPSRAYENSSSLNAEGSDAVISSIAPQVHAPSIPPQNCPRTSVAPHLCLPRSMAPHLRVLRKISKVHSTNMPEAHYSSAATMVPVICKPPLFGITQKGHGVHTSSMMCTTPNVVLHGPDHPAKLADTERNAPSLINGALRREVQVQRPNQGVDASSIITQAADTLVALSAHGEKGW</aaseq>

Gene Sequence

<dnaseqindica>1..962#1066..1301#1407..1486#1962..2057#2980..3877#3968..4095#ATGGATTCGCTTCAGAAGTCCCACGATTTGTGCCTGAAGCGCAAGCTTGTTGATGATTGCCTGTCGAAAGACTTCAAGTATCGCCGCGTCGAAGAGGATAATGTATCTTCCAATGTGGAGAGCAGGCCCTTACCCGGTTCACCTTCTCAGAGTTGCTGCATTCAACCTAATCTGGCTAAAGATTGTGTTAATTACCTGAAAAGCGGGTTGCCAAGTCGCATTGCATTTTACAAACAAGGTGCATGGTGTGATTTCCCTCAGAAAATAATGGAGTCCCTTGTTGAGGGATTCAAAGCTGATAAATCTAGTGCTGTAGTTGTGATGGATGATCAGCCTCTGCTTGTTGATTTCTTGTCGATGACCATGGTGAACCTAAAAACAAGAAAGCAGAGATCTGTCTCATGGCTAGATGGCACTGGCAAGTGGTTTTTTCCTTCTGCATACTTTGACGAGGGCNGTGATGAATCCAGAAAATTAAACATGGGTTCTGAAGGCAGCGGACAAGGTCTAACTGAGGGGATGGTTCCAAAGGCTCCAAATGAACTGGTGAAGCAAGCTGTCGTTGAAACTAGCTCTCCAGTTTTACAGAATTCTTGTATTCCTGACATATTACGCAAGAAGATTGTGCCTGTTGAAAGAGGCAGTGAGAGCTTTCAGTTGGTTCAGAACCTTTTCCTCTCTGGCATGGGTTCATTTGCATCACCTAAAAACTTACTTCATATTCATCGGTACTCTGCAGAGGATGTCACAGCACAATGTAGACTTGAGTCTTTTGCAAGACAGATGAGGTTGACGAGAAAGAAAATTGGTTATGCTGATGTGAGATATGGATGGCTTGGATCTAGGAAGCAAGACATAGTTGGAGTTTTGATTAATGGTTTTATTAGCACTGGACAAACAAGTCACAGTTCTGATATGCGTACTGGTGTGTATCTCTCGCCTGAAAACCGTGCATTTACCAGGTTGTTGTTTTACTTAACTTTCATTAGTGGCCTGTTTAAATTCTATGCTAGTGGATAATATACTAGTCAACTCATAATTTTAAATCTTTTTATCATTCTATAGTGTTGGTCTCTGTGATGTTGATGAAAAAGGAGTTCAGTACATGTTGCTGTGCCGAGCAATATTGGGCAACATGGGAACTATAAAACCAGGATCACAGGATGAGTTTCTAAGCATATATGATTCTGGTGTTGACAATTGCTCCAATCCAAGCTATTATGTGATTTGGCCATCAAAGCTAGGCACTCATATTTCTCTGGAATATCTCATTAGTTTTAGGCTCACACCAGAAATTCAAGGTAAATTTAGCTAGGGGTGTTAAGAGTTAAGATTCTGACAATGTATACTCACACTGAGACAGAATGGGTGATTCATTCTTTAATCTTAACTGTACTTATTTTCAGACTACTTGCTTCACTTGAAGGGTTTATGGTTGTGCCCACCACCAAAAGAAGTGGAAGTGGATCTTTCTACTCTTCAACCTGTGAGTTGCTTTAAGAGTCATCTTGTGGTACATTCCATTAGGAAACAAAGGAGTTGCAATCCTTTTTGTTTTTTTTTTTTTGAAAAAAAAACTTGGATGCATCTTATAGAGAATTCCTGTCCAGGTTCACATTTACTACTATTCACGCCTTTTGTGTTGAATAAAATAGGTCAAAATTATCACAAAAAACTAGCAATTGTCTCATTGACCTGAGACCTATGACATAAATGTAGGTAGTGTGCGAATCTGATAATGGACCAACTTCTCCATGGATCCCATTCAGAGTTCTCTTTGGAACAATACAAGACAGTATATCATCACTAGCAAGGGAACTGCTCTTTCATCATTATCAAGAGCTGAAGGTGTTACTGTCTTGACAATTTATAATGTTCTGTTGTCAGGTGTCATTGAATTTTGCTGTCAGTTCTCTTCTGTGTTTCAATGTTTTAAAACCACACTTTTTTCTATTTGTTAGGAAAACAAGATTACTCGTGAGGAAATGGTCAAGAAAATTATCATAATAGTTGGAGAGCAATTGCTTTTGGATTCCTTGACGAAACTTAACTACAATGTAAGTCCTGCTTGTGCACGTTACTAGTGGAAACAGTAGGGGAGAGCCCTACTGAAAACATTTGTAAATAATAATAAGAAATACAGTGTTATAGAACTGAAGAAGAAAAACTCTGTAAAGTCCAAGTAGGAAGGCAAGATTGTAAATTTTAGGCCTTATATTTTAGTTCTAGGGAGCAGAAAGTAATTTTTTGGAAATTATTATTGCACAAAGCTTTCATGGAAAATCTTCCCTCACACCGAAAAGCTCATATGCATATGAAAGTGTCTGCCTTTTTTATTTTTTAACATGAACAATGAAACAGAATTTGATTAATTAAATTGCTTACCTGTTTCTCTTGTATGTGTTGTGAGGAGGGTCATGCAGAATTGGATTGCCTGAGAACCAACAATGAATAGTGATCCTTAGTCATAATGGAACGCGTGCTCTTGAGTCTTGAGTGTTTTAATGACCCCAGCGATTTCTTATTGATTATTGTTTTTCTTATTAGTTGGCTTGTTTACAGCATATTGTTGGCAGATTTGGCACGTTAATTAACGATAGTCTATCAGTTACACACATAATGGATGGTAATGCTGATTGCTTTGGAAAAAAAATGGCACATACTACCATCCTATTGAAAGGACACCACATTGTTATGTGCTGTAAATACATGATTTACCATTCAGTCTTGTTGGGACCTTTTTATAAGAGTGGCACATTTTTTATAAGGCTAAATTTCAAACTGTGGAACCTTTTCCTCTTGGACATCTAGTAAGAAAGAAGAAATAGCATACGGATAAATTGAGTACTATTGTATTCTTGGACATGCTTGGAACCTGTTAAGGATCTTTTATTAATCAAATAGCCAATCAGTACATATATGTGAGCCTTTTCTCTTGTTCCCATATCATGTTCTAAACTTCCTTTCTTTCTATTGCAGCCGTCAGAATGGTACAAGTCTTGTTCAGAAGTTAACTGTCATCCTTTAAGTATAAAACTGGATCCTATCTCCAACAGTAGAATTAACATAAACTCTGCATCTGGAAGAGCTAGCAACGATTCTCAAGCACCAAGTGTACAACCTCAGAAATGTGGACCTGTGGATTCTACAGTAGTAAGCATGGCCCTCAAAAGAGAACAATTCTCCATCCCAAGTATGTGTTCTGAAAGCTTTTCATCCCATTGCACAAAAAGTCAGGATTCTGTTGTGAGGATGAGACCCGATGACACCCTTGTGAGGAGGGCATTAATCAGTGATAGTGTTAATGGCTGTGATTCTGTTGGACCAACTGTTGAATCGCATTGCCATTCTCTCCTTTCGCAGAATTTTGACTCTGAAGGGCATGCTTCTCATGTAGTATCAATGTTTGGAAACTCTGGAGCAAGACTACATTCTAGTGCACCATGTATGACAACTGAAGCCCAGGTGTTTGTTGCACCAAGTAGAGCATATGAGAACTCATCATCTCTGAATGCTGAAGGCAGTGATGCTGTGATTTCAAGCATAGCCCCTCAAGTCCACGCACCAAGTATTCCCCCTCAAAATTGTCCACGAACGAGTGTGGCACCTCACCTCTGTTTACCAAGAAGTATGGCGCCCCACCTCCGTGTACTGAGAAAGATTTCTAAGGTTCATTCAACAAACATGCCTGAAGCTCACTATTCCAGTGCAGCAACTATGGTTCCTGTCATCTGTAAACCTCCATTGTTTGGCATTACCCAAAAAGGGCATGGTGTTCATACATCAAGTATGATGTGTACAACACCAAATGTAGTTCTCCATGGTCCTGATCACCCTGCAAAGTTGGCAGATACAGAGCGTAATGCTCCGTCACTAAGTATGTTGCTTGAAACTTATCTTCTCCTGCAGTATTGCAGGTTCACATATCTTGTCCACCTAATAAAGCTTTTCCAATGGTTTTGTGCAGTAAATGGGGCGTTGAGAAGAGAGGTACAAGTACAACGCCCCAATCAAGGTGTTGATGCTAGTAGCATCATCACCCAAGCAGCAGATACACTCGTGGCGTTATCAGCCCACGGTGAGAAAGGCTGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022626